Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1352g00010.t01
CDS Infomation

cds chromosome:12X:Un:38747500:38748788:-1 gene:VIT_00s1352g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAACGTCAAGAAAGGGCCATGGTCACCAGAG
GAAGATGCCAAGCTCAAGACTTATATTGAGAAAAACGGCACTGGGGGCAACTGGATAGCC
TTACCTCAAAAGATTGGCCTTAAGCGATGTGGGAAGAGCTGCCGCCTCCGCTGGTTGAAT
TATCTCAGGCCCAATATCAAACATGGAGGATTTTCAGAGGAGGAGGATAACATCATTTGC
AGCCTCTATATAAGTATTGGAAGCAGGTGGTCCGTCATCGCGACTCAATTACCGGGAAGA
ACTGATAATGATATTAAGAACTACTGGAACACAAGGTTGAAGAAAAAGCTACTCGGCAAG
CAGCGGAAAGAACAACAGGCTCGCCGAGCTAACTACGTCAAGCAAGAGATGAAGAGAGAA
CCTGGGATTTTTGTGGTTCCTGATCAGGCCGTTGGCAGAAACCCTTATTGGGCGGAGCTA
CCTGCAGTATCTGTGCATCCGAACCAAGATCCGGATATCAAGGACCAAGCATCCATTAAG
AAATTGCTGATCAAGCTGGGAGGAAGATTTGGTGATGATGGTCAACAACCAGGCAGTAAC
AGCATAAACTTTCAGTACCCTCTTGATATTTCCACCGCACAAGATGGTCCATATGAGACA
TCCATGAACATGTTTGCCTCATCTACGTCGACCATGAATTCAATCAACAGTACGGGTTCC
CAATTGCCAAACACCCACTATGACGTCAATGGATCAGCTTCAAATGTTCTTCAAGGGTAT
AACAGCCTCCTAAATGAACTGGTGTATGGCAACCCACAACAATTAGATGGCTCTGGGAGC
TTTTACGGAATAGAAGACATCGCCAATGGTAGCACTGGGACTAGCTCCGCAGAAAGCAGC
AGTTGGGGAGATATAAACTCTCTGGTTTACCCCTCTATCATCTCCAATTATGGAGTTGGC
CAACAAGGGCCATTACAAGATTCTGGTTTTGAAGAGTTGAGGTACCTGGGCTCCCAATAG

Peptide Sequence

PEP ID

VIT_00s1352g00010.t01
PEP Infomation

pep chromosome:12X:Un:38747500:38748788:-1 gene:VIT_00s1352g00010 transcript:VIT_00s1352g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRAPCCDKANVKKGPWSPEEDAKLKTYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLN
YLRPNIKHGGFSEEEDNIICSLYISIGSRWSVIATQLPGRTDNDIKNYWNTRLKKKLLGK
QRKEQQARRANYVKQEMKREPGIFVVPDQAVGRNPYWAELPAVSVHPNQDPDIKDQASIK
KLLIKLGGRFGDDGQQPGSNSINFQYPLDISTAQDGPYETSMNMFASSTSTMNSINSTGS
QLPNTHYDVNGSASNVLQGYNSLLNELVYGNPQQLDGSGSFYGIEDIANGSTGTSSAESS
SWGDINSLVYPSIISNYGVGQQGPLQDSGFEELRYLGSQ

Transcript Sequence

Transcript ID

VIT_00s1352g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:38747500:38748788:-1 gene:VIT_00s1352g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACCAACTTTCACCCTCATAGCAGCAACACCAAAAACATGGGGAGAGCTCCTTGCTGTGA
CAAAGCCAACGTCAAGAAAGGGCCATGGTCACCAGAGGAAGATGCCAAGCTCAAGACTTA
TATTGAGAAAAACGGCACTGGGGGCAACTGGATAGCCTTACCTCAAAAGATTGGCCTTAA
GCGATGTGGGAAGAGCTGCCGCCTCCGCTGGTTGAATTATCTCAGGCCCAATATCAAACA
TGGAGGATTTTCAGAGGAGGAGGATAACATCATTTGCAGCCTCTATATAAGTATTGGAAG
CAGGTGGTCCGTCATCGCGACTCAATTACCGGGAAGAACTGATAATGATATTAAGAACTA
CTGGAACACAAGGTTGAAGAAAAAGCTACTCGGCAAGCAGCGGAAAGAACAACAGGCTCG
CCGAGCTAACTACGTCAAGCAAGAGATGAAGAGAGAACCTGGGATTTTTGTGGTTCCTGA
TCAGGCCGTTGGCAGAAACCCTTATTGGGCGGAGCTACCTGCAGTATCTGTGCATCCGAA
CCAAGATCCGGATATCAAGGACCAAGCATCCATTAAGAAATTGCTGATCAAGCTGGGAGG
AAGATTTGGTGATGATGGTCAACAACCAGGCAGTAACAGCATAAACTTTCAGTACCCTCT
TGATATTTCCACCGCACAAGATGGTCCATATGAGACATCCATGAACATGTTTGCCTCATC
TACGTCGACCATGAATTCAATCAACAGTACGGGTTCCCAATTGCCAAACACCCACTATGA
CGTCAATGGATCAGCTTCAAATGTTCTTCAAGGGTATAACAGCCTCCTAAATGAACTGGT
GTATGGCAACCCACAACAATTAGATGGCTCTGGGAGCTTTTACGGAATAGAAGACATCGC
CAATGGTAGCACTGGGACTAGCTCCGCAGAAAGCAGCAGTTGGGGAGATATAAACTCTCT
GGTTTACCCCTCTATCATCTCCAATTATGGAGTTGGCCAACAAGGGCCATTACAAGATTC
TGGTTTTGAAGAGTTGAGGTACCTGGGCTCCCAATAG