Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1343g00010.t01
CDS Infomation

cds chromosome:12X:Un:38686509:38690071:-1 gene:VIT_00s1343g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCTCAAAGGTTGCTCCATGGGTTCTGTTCAAACTCAGCAATCCCACCAATTCGG
AACCCCAAAAAACCTTTCTTTATGATTTTTAATCCTTCTCTTGATCATTCTAAGAGATGG
GCCTCCTTCAAAACTCACCATTACGATGCCCCCCAAACGGTATCGTGGTCTAAGAGGAGG
TTAGAGTGTCGAAATAGTGTAGAAAACGCAGGGGGTTTTACTGGCGGTGAGAAGGGTTTG
GAAAGCGGGATTCGACGGAAGAATCTGGCGGTTTTTGTCTCCGGCGGAGGGTCGAATTTC
CGGTCGATTCACGAGGCGTGTCTTCGGGGCTCGGTTCATGGAGACATTGTTGTTTTGGCA
ACCAATAAATCTGGTTGCGGAGGTGCAGAATATGCAAGAGGTAAGGGTATCCCAGTCATT
TTGTTCCCGAAAGCGAAGGATGAACCTGAGGCATTATCACCAAATGACCTTGTGGCTGCT
CTTAGAGGTTTTGAGGTGGACTTTATTCTCCTAGCTGGATATCTGAAACTTATCCCAGTT
GAGTTGATCCGAGCTTATCCGAAATCCATACTAAATATCCATCCCTCGCTTCTTCCTGCT
TTTGGGGGTAAAGGATATTATGGTATGAAGGTGCATAAAGCAGTCATTGCTTCTGGAGCA
AGATACTCAGGTCCTACAGTCCATTTCGTTGATGAGCACTATGACACAGGGCGTATCCTT
GCTCAAAGAGTTGTGCCTGTGCTTGCTGATGACACTGCAGATGAGCTGGCCGCAAGGGTT
CTTCATCAGGAGCATCGCGTATACGTGGAGGTGACATCAGCATTATGTGATGAGCGGATT
GTTTGGAGAGAAGATGGGGTGCCTATCATCCAGAGTAAAGAAAACCCTAACGATTATAGC
TAA

Peptide Sequence

PEP ID

VIT_00s1343g00010.t01
PEP Infomation

pep chromosome:12X:Un:38686509:38690071:-1 gene:VIT_00s1343g00010 transcript:VIT_00s1343g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEAQRLLHGFCSNSAIPPIRNPKKPFFMIFNPSLDHSKRWASFKTHHYDAPQTVSWSKRR
LECRNSVENAGGFTGGEKGLESGIRRKNLAVFVSGGGSNFRSIHEACLRGSVHGDIVVLA
TNKSGCGGAEYARGKGIPVILFPKAKDEPEALSPNDLVAALRGFEVDFILLAGYLKLIPV
ELIRAYPKSILNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTVHFVDEHYDTGRIL
AQRVVPVLADDTADELAARVLHQEHRVYVEVTSALCDERIVWREDGVPIIQSKENPNDYS

Transcript Sequence

Transcript ID

VIT_00s1343g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:38686509:38690071:-1 gene:VIT_00s1343g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAAGGAGCAGCCCACACTTTCAAAGTTCCACAAAATCTTCGCCTTTGCCAAGTATTTC
ATCTTCTTCTCTAAACGATAGAGAGCCAGAACAACCAGTAGAAATACCAGTACTGATCAC
AAATTCGACTCACTTTAATACGGTTTTCATTTTTTTTTTTTCTGAAAACGTGAATGGAAG
CTCAAAGGTTGCTCCATGGGTTCTGTTCAAACTCAGCAATCCCACCAATTCGGAACCCCA
AAAAACCTTTCTTTATGATTTTTAATCCTTCTCTTGATCATTCTAAGAGATGGGCCTCCT
TCAAAACTCACCATTACGATGCCCCCCAAACGGTATCGTGGTCTAAGAGGAGGTTAGAGT
GTCGAAATAGTGTAGAAAACGCAGGGGGTTTTACTGGCGGTGAGAAGGGTTTGGAAAGCG
GGATTCGACGGAAGAATCTGGCGGTTTTTGTCTCCGGCGGAGGGTCGAATTTCCGGTCGA
TTCACGAGGCGTGTCTTCGGGGCTCGGTTCATGGAGACATTGTTGTTTTGGCAACCAATA
AATCTGGTTGCGGAGGTGCAGAATATGCAAGAGGTAAGGGTATCCCAGTCATTTTGTTCC
CGAAAGCGAAGGATGAACCTGAGGCATTATCACCAAATGACCTTGTGGCTGCTCTTAGAG
GTTTTGAGGTGGACTTTATTCTCCTAGCTGGATATCTGAAACTTATCCCAGTTGAGTTGA
TCCGAGCTTATCCGAAATCCATACTAAATATCCATCCCTCGCTTCTTCCTGCTTTTGGGG
GTAAAGGATATTATGGTATGAAGGTGCATAAAGCAGTCATTGCTTCTGGAGCAAGATACT
CAGGTCCTACAGTCCATTTCGTTGATGAGCACTATGACACAGGGCGTATCCTTGCTCAAA
GAGTTGTGCCTGTGCTTGCTGATGACACTGCAGATGAGCTGGCCGCAAGGGTTCTTCATC
AGGAGCATCGCGTATACGTGGAGGTGACATCAGCATTATGTGATGAGCGGATTGTTTGGA
GAGAAGATGGGGTGCCTATCATCCAGAGTAAAGAAAACCCTAACGATTATAGCTAACAAA
ATCACATACAGGGTACCCAGCTGATCAATTCAGCCACATGATAATTTTCCTTCTGCTTTC
TTTGGAAGACAAAGAGACATATCTGCAGATTTTGTATCAGTAGATTAGTTGTTATATCCT
TCTGAACTGGAAGTGTTGTTCATTTTTGATAGCTTATGTAAGCTTATTCAATTGCCCAAA
CAGCTTGCAGATGTTGAGCTGTATTGAGTATTGGAAGACGAAAACTGTATCAAAAATCAA
ACTTGAGAGCTGCTACACAGTGAATCAAGAAGCGGGTT