Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1321g00010.t01
CDS Infomation

cds chromosome:12X:Un:38516020:38519625:-1 gene:VIT_00s1321g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGACATCCACCAACTCAACGGAAATTTGTACCGTGCTCTGATGGAGAAGAACCCC
AAGGATGTGCTGGGTTTCCTTCCAGTAGACGAAGGTCCATTGCACAAAATCACCATACAT
AAAGACACCGTTCTCCATATGGCCTGTTACTCCAAGCAGTGTGATCTCGCGCTCGAGTTA
CTGCAACTGTTGCCCCCCAGTCTTAACCAGCGATTCGCCAACTCTAAAAACGATGTGGAC
AACACTATCCTCCACGAGGTAGCCACTTACAACGCCATGACTGACGTTGCCACTGAAATA
TTGAACAGAGCTCCGGAGTTGCTTACTGCTCGTAACATCCTTGGAGAGACACCTCTCTTT
CGGGCGGTCCGGTACGGGAAAGATGAAATGTTCAAGCTACTAGCTGAGAAGCTTGACCGT
ATGGATTTTGAAACTGAAGAAGATCGTAAAGCCTGTTTGCGGAGGAATGATGGAACAACT
ATTCTCCATATTTCCGTATTTACTGAGAATTTTGACTTGGCGCTGTTGATAGCGGAAAGA
TATGGAGATTTAATTAGCGCCTGGGACTCTAACCAAATGACGGCTCTGCAACATCTAGCA
TGCAACCCATCGGCATTTCTCAGTGGATGCGAACACGGACATCTGAGGCGATTCATCTAC
TCTTGTATTTCAAACAAGGCCAGGGGAGGTCGGTGTCAAGATCTTAAATCTGTTGCTAAA
TCACGCTTTAGATGGCCCATTTGGGAAGCACTTTTGGAAGAAAAGCATAGATATGATGCA
GCTCGCGAACTTGCCAGTAAGTTACTAGAAAGTGATACTTCCTGGGAGGCTACGAATCCT
CAAGCAGTGGACCGAGGGTCCATTTCTGTGCAAGAGAAAGGAGGAGACTCATCGGTATCA
TCAAAAGAAAAGGCAAAAGTGGATCCCTCTATTGCCCTGCAACACCCAGATGAGAAGAAA
GGAAAAACCTCTCCAGAAGTCAATAGAACTAGATTCAACAATATCAGGAACAAGGAAACT
CCATTGTTTTTGGCAACAATGTCAGGCATTCCAGAGATTGTCGATGAAATACTCAAGAAG
TACCCTCAGGCAATTGAGCATTATAATGACCAAGGAAGGAACATACTTCATGTAGCGATC
AATTACCGCCAGATAGAGATTTTTGATAGGGTGGTCAAGATGGAAATGCCAGCAAGGAGG
CTACTACGGGCAACAGACGCTAAAGGGAACTCCATTCTGCATATGGTAGGAAAGAAAGGA
AAACGCTATGTCTCGAGAAAATCACGATCCCCTGCAATCCAATTGCAAGAGGAGTTGCTC
TTGTTTGAGCGTGTGAAGGAATACTCTAAATCCCATTTCCTCAAGGTCTTCAACCATAAC
AACCAGACTGCAGATGAATTATTTGCTTCCAACTACTGTGAACTTCATGAGGAAGCCAAA
GAATGGCTGAAGCGCACCGCTGAAAACTGCACCATTGTGGCTGTTCTTATTGCTACCGTT
GCCTTTGCTGCGGCCTACACTATACCAGGAGGACCAAATCAAAGCACTGGAATCCCACTC
CTCCTTTCTCAACCATTCTTCGTGGTTTTCACCCTGGCGGATGTAATCTCCCTCACTTAC
GCCTTGACATCTGTCATCACATTTCTCTCAATCCTCACATCCCCATTTCAATTACAAGAC
TTCAAGAAGTCTCTTCTTCGAAAGCTGATGCTCGGTTTTACGTTTTTAATCCTCTCCGTG
TCAATGATGATGGTGGCATTTGCTGCAACAATCATCCTTATGATACATAATAAGGAAAGG
TGGACCAAAATTGTCCTATACTCGGTTGCATTCCTCCCAGTTATTATTTTTGCACTCTCA
TATTCCCCGCTATATTATAGACTCCTGAAAGCTTGCACCGGTCTGCTCAATCTTGCACTT
GAGCTTTGCCCCAGGTGTACTTGTGTTTCTCCACCATCATGGACAACCAAGTTTTTCAAC
CGCAGAGAATCCAAGCCCAACCGCTTTCAATCTCAAACATTCAGTTCCAAATGCCCTTCT
ATATTTCAAACCACTTATTCTTCAGTTTGA

Peptide Sequence

PEP ID

VIT_00s1321g00010.t01
PEP Infomation

pep chromosome:12X:Un:38516020:38519625:-1 gene:VIT_00s1321g00010 transcript:VIT_00s1321g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADIHQLNGNLYRALMEKNPKDVLGFLPVDEGPLHKITIHKDTVLHMACYSKQCDLALEL
LQLLPPSLNQRFANSKNDVDNTILHEVATYNAMTDVATEILNRAPELLTARNILGETPLF
RAVRYGKDEMFKLLAEKLDRMDFETEEDRKACLRRNDGTTILHISVFTENFDLALLIAER
YGDLISAWDSNQMTALQHLACNPSAFLSGCEHGHLRRFIYSCISNKARGGRCQDLKSVAK
SRFRWPIWEALLEEKHRYDAARELASKLLESDTSWEATNPQAVDRGSISVQEKGGDSSVS
SKEKAKVDPSIALQHPDEKKGKTSPEVNRTRFNNIRNKETPLFLATMSGIPEIVDEILKK
YPQAIEHYNDQGRNILHVAINYRQIEIFDRVVKMEMPARRLLRATDAKGNSILHMVGKKG
KRYVSRKSRSPAIQLQEELLLFERVKEYSKSHFLKVFNHNNQTADELFASNYCELHEEAK
EWLKRTAENCTIVAVLIATVAFAAAYTIPGGPNQSTGIPLLLSQPFFVVFTLADVISLTY
ALTSVITFLSILTSPFQLQDFKKSLLRKLMLGFTFLILSVSMMMVAFAATIILMIHNKER
WTKIVLYSVAFLPVIIFALSYSPLYYRLLKACTGLLNLALELCPRCTCVSPPSWTTKFFN
RRESKPNRFQSQTFSSKCPSIFQTTYSSV

Transcript Sequence

Transcript ID

VIT_00s1321g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:38516020:38519625:-1 gene:VIT_00s1321g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGACATCCACCAACTCAACGGAAATTTGTACCGTGCTCTGATGGAGAAGAACCCC
AAGGATGTGCTGGGTTTCCTTCCAGTAGACGAAGGTCCATTGCACAAAATCACCATACAT
AAAGACACCGTTCTCCATATGGCCTGTTACTCCAAGCAGTGTGATCTCGCGCTCGAGTTA
CTGCAACTGTTGCCCCCCAGTCTTAACCAGCGATTCGCCAACTCTAAAAACGATGTGGAC
AACACTATCCTCCACGAGGTAGCCACTTACAACGCCATGACTGACGTTGCCACTGAAATA
TTGAACAGAGCTCCGGAGTTGCTTACTGCTCGTAACATCCTTGGAGAGACACCTCTCTTT
CGGGCGGTCCGGTACGGGAAAGATGAAATGTTCAAGCTACTAGCTGAGAAGCTTGACCGT
ATGGATTTTGAAACTGAAGAAGATCGTAAAGCCTGTTTGCGGAGGAATGATGGAACAACT
ATTCTCCATATTTCCGTATTTACTGAGAATTTTGACTTGGCGCTGTTGATAGCGGAAAGA
TATGGAGATTTAATTAGCGCCTGGGACTCTAACCAAATGACGGCTCTGCAACATCTAGCA
TGCAACCCATCGGCATTTCTCAGTGGATGCGAACACGGACATCTGAGGCGATTCATCTAC
TCTTGTATTTCAAACAAGGCCAGGGGAGGTCGGTGTCAAGATCTTAAATCTGTTGCTAAA
TCACGCTTTAGATGGCCCATTTGGGAAGCACTTTTGGAAGAAAAGCATAGATATGATGCA
GCTCGCGAACTTGCCAGTAAGTTACTAGAAAGTGATACTTCCTGGGAGGCTACGAATCCT
CAAGCAGTGGACCGAGGGTCCATTTCTGTGCAAGAGAAAGGAGGAGACTCATCGGTATCA
TCAAAAGAAAAGGCAAAAGTGGATCCCTCTATTGCCCTGCAACACCCAGATGAGAAGAAA
GGAAAAACCTCTCCAGAAGTCAATAGAACTAGATTCAACAATATCAGGAACAAGGAAACT
CCATTGTTTTTGGCAACAATGTCAGGCATTCCAGAGATTGTCGATGAAATACTCAAGAAG
TACCCTCAGGCAATTGAGCATTATAATGACCAAGGAAGGAACATACTTCATGTAGCGATC
AATTACCGCCAGATAGAGATTTTTGATAGGGTGGTCAAGATGGAAATGCCAGCAAGGAGG
CTACTACGGGCAACAGACGCTAAAGGGAACTCCATTCTGCATATGGTAGGAAAGAAAGGA
AAACGCTATGTCTCGAGAAAATCACGATCCCCTGCAATCCAATTGCAAGAGGAGTTGCTC
TTGTTTGAGCGTGTGAAGGAATACTCTAAATCCCATTTCCTCAAGGTCTTCAACCATAAC
AACCAGACTGCAGATGAATTATTTGCTTCCAACTACTGTGAACTTCATGAGGAAGCCAAA
GAATGGCTGAAGCGCACCGCTGAAAACTGCACCATTGTGGCTGTTCTTATTGCTACCGTT
GCCTTTGCTGCGGCCTACACTATACCAGGAGGACCAAATCAAAGCACTGGAATCCCACTC
CTCCTTTCTCAACCATTCTTCGTGGTTTTCACCCTGGCGGATGTAATCTCCCTCACTTAC
GCCTTGACATCTGTCATCACATTTCTCTCAATCCTCACATCCCCATTTCAATTACAAGAC
TTCAAGAAGTCTCTTCTTCGAAAGCTGATGCTCGGTTTTACGTTTTTAATCCTCTCCGTG
TCAATGATGATGGTGGCATTTGCTGCAACAATCATCCTTATGATACATAATAAGGAAAGG
TGGACCAAAATTGTCCTATACTCGGTTGCATTCCTCCCAGTTATTATTTTTGCACTCTCA
TATTCCCCGCTATATTATAGACTCCTGAAAGCTTGCACCGGTCTGCTCAATCTTGCACTT
GAGCTTTGCCCCAGGTGTACTTGTGTTTCTCCACCATCATGGACAACCAAGTTTTTCAAC
CGCAGAGAATCCAAGCCCAACCGCTTTCAATCTCAAACATTCAGTTCCAAATGCCCTTCT
ATATTTCAAACCACTTATTCTTCAGTTTGAAAGGCCAATGAGGACCTATGTATGTATGTA
TGAGTGATTTGAATGCTTCTTTCTCTTTCATTTGCTTAGAACTGATTGTACAAATGTTCT
GTAATAAGTGAACCGGTAGTTGATGATATTTTAACAAACGAAAAAAATGAAA