Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1314g00010.t01
CDS Infomation

cds chromosome:12X:Un:38490496:38492516:-1 gene:VIT_00s1314g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGCCTTTTGATAACTCACTTGATGGGTTCAATTTTGACTCTTTTTCTTCTGAGAGC
AACTCATCTTACCCATCTTTCAGTCCCGAAACCACACCCAACTTTTGCGGTTCAACCATT
GAATATTTTCAGGCGGCCGGCGTTGTAGGGAGGCCATCAAAACAGCTCAAGACCAATAGT
TGGGACTCCTGCACTGCGGAACCCATTACCTCCAGAAAATCTTCGTCCTCCTCCGTCCAA
CTAATTTCTTTTGGGAACTCGAATTTACCACCACCTACTGATACCCTGAAGTTCCACGGA
CACCAAGACAAAAAGGCGAAGCCTAAAAATGAGGCTTCGTCTGACAGAAATATGAAATTT
GCATCTTTGATTTCTGAGGGCTCATATGAGAACCAAAACTATTCACCAAAATCCGGCGAC
AGGACCAAGCGGGTTAGTTCAACTACTAGGAATCCTTTAAACAACCACGATCATGTAGTA
GCGGAGAGAAAGCGCCGAGAAAAGCTCACCCAGCGGTTTATAGCTCTTTCAGCCCTTGTT
CCGGGCCTAAGAAAGACGGATAAGGTTTCTGTCCTTGGAGAAGCTGTCAAGTATTTGAAA
CAGCTTCAAGAACGAGTGAAGATGCTCGAGGTACAGACGGCAACGAAAACCATGGAATCA
GTGGTCTCTGTGAAGAAATCTCAGCTCTGTGATAATGACCACTCTTCATCTGATCAGAAC
TCTGATAGCTGCTCCAACCAAACACTCTTAGAAATTGAAGCAAGAGTCTTTAATAAGGAC
GTACTCATTAGAATCCACTGCGAGAGACAAAAGGGATTTACTGTGAAAATACTTGATGAA
ATCGAGAAACTCCATCTAACCGTCGTCAATAGCAGTAGCTTGCCATTTGGGAATTACATT
ATGGTTATTACAGTTGTTGCTCAGATGGAAGACGAATTTTGCATGACCGTGGAGGACCTC
GTCAGAAACCTCCGATTGGCTTTTTCTACGCTTCATATGAACTGA

Peptide Sequence

PEP ID

VIT_00s1314g00010.t01
PEP Infomation

pep chromosome:12X:Un:38490496:38492516:-1 gene:VIT_00s1314g00010 transcript:VIT_00s1314g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPPFDNSLDGFNFDSFSSESNSSYPSFSPETTPNFCGSTIEYFQAAGVVGRPSKQLKTNS
WDSCTAEPITSRKSSSSSVQLISFGNSNLPPPTDTLKFHGHQDKKAKPKNEASSDRNMKF
ASLISEGSYENQNYSPKSGDRTKRVSSTTRNPLNNHDHVVAERKRREKLTQRFIALSALV
PGLRKTDKVSVLGEAVKYLKQLQERVKMLEVQTATKTMESVVSVKKSQLCDNDHSSSDQN
SDSCSNQTLLEIEARVFNKDVLIRIHCERQKGFTVKILDEIEKLHLTVVNSSSLPFGNYI
MVITVVAQMEDEFCMTVEDLVRNLRLAFSTLHMN

Transcript Sequence

Transcript ID

VIT_00s1314g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:38490496:38492516:-1 gene:VIT_00s1314g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAATACCAGATGCCGCCTTTTGATAACTCACTTGATGGGTTCAATTTTGACTCTTTTTCT
TCTGAGAGCAACTCATCTTACCCATCTTTCAGTCCCGAAACCACACCCAACTTTTGCGGT
TCAACCATTGAATATTTTCAGGCGGCCGGCGTTGTAGGGAGGCCATCAAAACAGCTCAAG
ACCAATAGTTGGGACTCCTGCACTGCGGAACCCATTACCTCCAGAAAATCTTCGTCCTCC
TCCGTCCAACTAATTTCTTTTGGGAACTCGAATTTACCACCACCTACTGATACCCTGAAG
TTCCACGGACACCAAGACAAAAAGGCGAAGCCTAAAAATGAGGCTTCGTCTGACAGAAAT
ATGAAATTTGCATCTTTGATTTCTGAGGGCTCATATGAGAACCAAAACTATTCACCAAAA
TCCGGCGACAGGACCAAGCGGGTTAGTTCAACTACTAGGAATCCTTTAAACAACCACGAT
CATGTAGTAGCGGAGAGAAAGCGCCGAGAAAAGCTCACCCAGCGGTTTATAGCTCTTTCA
GCCCTTGTTCCGGGCCTAAGAAAGACGGATAAGGTTTCTGTCCTTGGAGAAGCTGTCAAG
TATTTGAAACAGCTTCAAGAACGAGTGAAGATGCTCGAGGTACAGACGGCAACGAAAACC
ATGGAATCAGTGGTCTCTGTGAAGAAATCTCAGCTCTGTGATAATGACCACTCTTCATCT
GATCAGAACTCTGATAGCTGCTCCAACCAAACACTCTTAGAAATTGAAGCAAGAGTCTTT
AATAAGGACGTACTCATTAGAATCCACTGCGAGAGACAAAAGGGATTTACTGTGAAAATA
CTTGATGAAATCGAGAAACTCCATCTAACCGTCGTCAATAGCAGTAGCTTGCCATTTGGG
AATTACATTATGGTTATTACAGTTGTTGCTCAGATGGAAGACGAATTTTGCATGACCGTG
GAGGACCTCGTCAGAAACCTCCGATTGGCTTTTTCTACGCTTCATATGAACTGAAGAACC
AAATCATTTTTTAATAAGCATTGCCGTCTGTTTTTTGTTTTTTTTTTCCTTTAGGTATAA
CCTGAAGTTATTGTCTCGTCTTCACACCTCCTAAGAGAAATTAATGCCTGTAAAAAGCTA
TCTTCACCTTACACCACCGGTGATCACCATGTCTACTTGGCTGCTGAGGTTCAGTTTAGC
AGTAGGGTTATTGTTTGTGTTTGTCTTTTCCTGGTTGGCCAGATTCAATTACCCCACGTG
CTATAAAAAATAAAAAGGAAAGTTGCAGCTTTTTTTGAGGTA