Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1291g00010.t01
CDS Infomation

cds chromosome:12X:Un:38379449:38384637:1 gene:VIT_00s1291g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACCGGTGACTAACTGGCTCTCTTTTTCGCTCTCTCCCATGGAAATGCTGCGGTGT
TCAGAGTCTCAGATTATGCCCTATGAGAGCTCGTCTGCTGCTTCTCCGCATTACTATGTC
GATAACTTCTATGCAAACGGGTGGACAAATCCTAAGCCTCAAGTTATGTACACAGAAGGA
GACGACTATCAAGTAAAAGAGGCTGCTACACCAAGCATTACCAACTCGTCCATGCTCACA
AGCTTCGTCGACCCTCAACTCCATCACCAACAGGTTCCCAAGCTCGAGGACTTCCTTGGC
GGCGACTCATCGTCCTTGGTCCGATATTCGGAGAGCCAAACAGAGACCCAAGATTCCTCC
CTGACTCACATCTACGACCATGGTTCTGCTTACTTCAACGAACAACAAGATCTCAAAGCC
ATTGCGGCGACGGCAGGATTTCAAGCCTTTTCTACTAACTCGGGATCGGAAGTGGAAGAC
TCATCGTCCATTGGGAGAACCCAGCTCGCATCGAGCGATTTTCCAGGTCATTCGATTGAG
TCAGGGAACGAGTTGGCCTTCTCGCATTGTCCTACAGGGGCATTGTCACTTGGGGTTACG
ACTACGACTACGACTACTCAGAGATCTGATCAGCAGGCTATTGTTTCAGCTGATTCTGAT
TGCTCTAAAAAGATTGCTGATACCTTTGGCCAAAGAACTTCTATTTACAGGGGAGTTACC
AGACACAGGTGGACGGGTAGATATGAAGCGCATCTGTGGGATAACAGCAGCAGAAGGGAG
GGCCAGGCCAGGAAGGGGCGTCAAGGTGGGTATGACAAGGAAGAAAAGGCAGCAAGGGCC
TATGATTTAGCAGCTCTAAAGTACTGGGGTGCTTCTGCAACTACCAATTTCCCTGTTTCA
AATTATACCAAAGAATTGGAGGAGATGAAACATGTGACCAAGCAAGAATTCATCGCTTCA
CTGAGAAGGAAAAGTAGTGGCTTTTCAAGGGGAGCTTCCATTTACAGGGGTGTCACAAGG
CATCATCAACAAGGTCGATGGCAAGCAAGGATAGGTCGAGTTGCTGGAAATAAAGACCTG
TACCTGGGGACATTTGCCACCGAAGAGGAAGCAGCAGAGGCATATGACATAGCAGCCATA
AAGTTCAGGGGTGTGAATGCGGTGACCAATTTCGAGATGAACCGATATGATGTGGAAGCA
ATTGCAAATAGTGCTCTTCCCATTGGTGGAGCAGCAAAGCGGCTAAAGCTCTCGCTTGAA
TCAGATCAGAAGCCTTGTTTGAACCTGGACCAGCAAACTCAGTCCAGCGCCAGCAGCAGT
GGCATCACTTTCGGCGCAATCCAACCAATTCCTGCAATCCCATGTGGAATTCCATTAGAT
ACTGCAACTGCATTTTATCATCACAACCTCTTCAACCATCTTCACTCCAGTAACATGGGC
GCCTCCAACTCCCCAGGCACGACCTCCTCCTCTATGCCAACCCCAATGGCTTTGTTGCCG
CCTCCAGCTGAGTTTTTCATATGGCCTCACCAGTCCTACTGA

Peptide Sequence

PEP ID

VIT_00s1291g00010.t01
PEP Infomation

pep chromosome:12X:Un:38379449:38384637:1 gene:VIT_00s1291g00010 transcript:VIT_00s1291g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPVTNWLSFSLSPMEMLRCSESQIMPYESSSAASPHYYVDNFYANGWTNPKPQVMYTEG
DDYQVKEAATPSITNSSMLTSFVDPQLHHQQVPKLEDFLGGDSSSLVRYSESQTETQDSS
LTHIYDHGSAYFNEQQDLKAIAATAGFQAFSTNSGSEVEDSSSIGRTQLASSDFPGHSIE
SGNELAFSHCPTGALSLGVTTTTTTTQRSDQQAIVSADSDCSKKIADTFGQRTSIYRGVT
RHRWTGRYEAHLWDNSSRREGQARKGRQGGYDKEEKAARAYDLAALKYWGASATTNFPVS
NYTKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDL
YLGTFATEEEAAEAYDIAAIKFRGVNAVTNFEMNRYDVEAIANSALPIGGAAKRLKLSLE
SDQKPCLNLDQQTQSSASSSGITFGAIQPIPAIPCGIPLDTATAFYHHNLFNHLHSSNMG
ASNSPGTTSSSMPTPMALLPPPAEFFIWPHQSY

Transcript Sequence

Transcript ID

VIT_00s1291g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:38379449:38384637:1 gene:VIT_00s1291g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCCTCTCTCTCTCTCTCTCTCTCAGATTTTACGCCCAATGGCATATGAAACCGCTGA
GTGCTCCCCAGTCTAATCCCAATTCCCACACAGTCACACACCCGCTCTCTCCTCTTTCGC
TTTCTCTTTCTACTTTCTACTTTCTACATAAGTGATTTTTTGTTAGGTTGAAGCAGCAGC
TTTAGTTACAAGTGGAGTTGCATGCAATGCGTTTCTGATCACCCTTCAACGCTCCTTCTG
CTCTCTTCTCTATCTTTTACCCCACTTCCTTCTTCTACTTCCTCATTCTCCAACTTTTCT
CCTCCTCTTCCTCACATGCTCACTCCTGGTAATTAACGCTTCGTTGTTTCTTCTCCTTTT
TCCAATATTGGGTGGGCGATTTTATTTTTCTATTTCATTTTCTTTTTGGGTTCTTGTTTG
GGAGGTGAGACTTGAGAGAGCCAAAATTAATCTTTCCCACTTGACTTCGATGTTTGGCTT
AACGTGGGATATTCTGGCTTTGTTTCAGTTTTCTCCACCACCAAACGGAGGATGAATGCG
ATCCGCTATTAGAGAAGCGAAAGATTAGTGGCTGAAGAAGTTCGCGAAAACAATGGCACC
GGTGACTAACTGGCTCTCTTTTTCGCTCTCTCCCATGGAAATGCTGCGGTGTTCAGAGTC
TCAGATTATGCCCTATGAGAGCTCGTCTGCTGCTTCTCCGCATTACTATGTCGATAACTT
CTATGCAAACGGGTGGACAAATCCTAAGCCTCAAGTTATGTACACAGAAGGAGACGACTA
TCAAGTAAAAGAGGCTGCTACACCAAGCATTACCAACTCGTCCATGCTCACAAGCTTCGT
CGACCCTCAACTCCATCACCAACAGGTTCCCAAGCTCGAGGACTTCCTTGGCGGCGACTC
ATCGTCCTTGGTCCGATATTCGGAGAGCCAAACAGAGACCCAAGATTCCTCCCTGACTCA
CATCTACGACCATGGTTCTGCTTACTTCAACGAACAACAAGATCTCAAAGCCATTGCGGC
GACGGCAGGATTTCAAGCCTTTTCTACTAACTCGGGATCGGAAGTGGAAGACTCATCGTC
CATTGGGAGAACCCAGCTCGCATCGAGCGATTTTCCAGGTCATTCGATTGAGTCAGGGAA
CGAGTTGGCCTTCTCGCATTGTCCTACAGGGGCATTGTCACTTGGGGTTACGACTACGAC
TACGACTACTCAGAGATCTGATCAGCAGGCTATTGTTTCAGCTGATTCTGATTGCTCTAA
AAAGATTGCTGATACCTTTGGCCAAAGAACTTCTATTTACAGGGGAGTTACCAGACACAG
GTGGACGGGTAGATATGAAGCGCATCTGTGGGATAACAGCAGCAGAAGGGAGGGCCAGGC
CAGGAAGGGGCGTCAAGGTGGGTATGACAAGGAAGAAAAGGCAGCAAGGGCCTATGATTT
AGCAGCTCTAAAGTACTGGGGTGCTTCTGCAACTACCAATTTCCCTGTTTCAAATTATAC
CAAAGAATTGGAGGAGATGAAACATGTGACCAAGCAAGAATTCATCGCTTCACTGAGAAG
GAAAAGTAGTGGCTTTTCAAGGGGAGCTTCCATTTACAGGGGTGTCACAAGGCATCATCA
ACAAGGTCGATGGCAAGCAAGGATAGGTCGAGTTGCTGGAAATAAAGACCTGTACCTGGG
GACATTTGCCACCGAAGAGGAAGCAGCAGAGGCATATGACATAGCAGCCATAAAGTTCAG
GGGTGTGAATGCGGTGACCAATTTCGAGATGAACCGATATGATGTGGAAGCAATTGCAAA
TAGTGCTCTTCCCATTGGTGGAGCAGCAAAGCGGCTAAAGCTCTCGCTTGAATCAGATCA
GAAGCCTTGTTTGAACCTGGACCAGCAAACTCAGTCCAGCGCCAGCAGCAGTGGCATCAC
TTTCGGCGCAATCCAACCAATTCCTGCAATCCCATGTGGAATTCCATTAGATACTGCAAC
TGCATTTTATCATCACAACCTCTTCAACCATCTTCACTCCAGTAACATGGGCGCCTCCAA
CTCCCCAGGCACGACCTCCTCCTCTATGCCAACCCCAATGGCTTTGTTGCCGCCTCCAGC
TGAGTTTTTCATATGGCCTCACCAGTCCTACTGACCGCACAATTATGCTAACAATTAGCA
AAAGCTCTTGTTTGTGCTTCCTACCCAGCTGACCCACATCTGACCCACCACCTCTTTCAT
GACTTTTAGCAGTTGTTGAAACATATGAGGTTTTGTTTGAGACAAGATGAAGTTCTAGTT
ATGCTAGGAAAACTAGGTTTTGTAAACTTCTCAATGGATGTTGAATGGGAGCCCTAATCT
TTTTTCTTAACA