Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1235g00020.t01
CDS Infomation

cds chromosome:12X:Un:38073749:38074693:-1 gene:VIT_00s1235g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCATTTTTGCCAAGGGCTGATAGCCGCTACCATGTTCGATCCATTAGCCTGCCT
ACTAGATCACATCCCAGTACGGTCAAGGTTGAAGAACAGCTGAACAAGCTTAAAGCTTGT
GAGGCTTCGTCTTCATCACAGGCAGAAAAAATTTGCAGGGGTCTATTTGGCCTTGTGGAG
TTGTATAGATGCGTAGAGGAACTCCTAAATTTGCCACTGACCCAACAAGCTCTAGCCCAG
TACCAACATGAGAAATGGGTGAACGAGCTGCTAGATGGATCAGTAAAATACTTGGATATA
TGCAGCAAAGCAAGCGACACTGTGTTATTGATGAAAGAAAGTGTCAGGGAACTCCAATCT
GCCCTTAGGCGAAGGAAGGGAGGGGAGTTCAGCATTGAAGGCAATGTTGCTGGTTACACT
TGCTGCAGAAAGAAGATGAAGAAGGAGGTTGCAAAGTCCCTTTCATCATTGAAGCAAATG
GAAAACAAATCCGGGACATCGCCTATCTTGGATCTCGATCAGCACCTCTCTTCAGTGGTT
AGAGTTCTCAGGGAAGCAAGTCTGATCACCACTTCCATCTTTCAACAGCTGTTGCTGTTC
CTCTCTGCGCCTGTGTTGAAACCAAAGCCTACCAAATGGTCATTGGTCTCAAGACTGGCG
CACAAAGGAGTAATAGTATGTGAAGCCCAAGGGAAGAAGATCAATGAATTAGAAAGTGTG
GATATTGCAGTTTGCAACCTACTAGTGCAGAATCCAAGCAAGGATCCTGAGGCAGAGAAG
ATTCAGTCTGCACACAAAAGATTGGAGGCTTTGGATATGAGCATTGAAGGCCTTGAAAAT
GGATTGGGGTGCTTGTTTAGGCGGTTGATCCAAACAAGAGTCTCCCTCCTCAATATACTT
TCTCACTAG

Peptide Sequence

PEP ID

VIT_00s1235g00020.t01
PEP Infomation

pep chromosome:12X:Un:38073749:38074693:-1 gene:VIT_00s1235g00020 transcript:VIT_00s1235g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAFLPRADSRYHVRSISLPTRSHPSTVKVEEQLNKLKACEASSSSQAEKICRGLFGLVE
LYRCVEELLNLPLTQQALAQYQHEKWVNELLDGSVKYLDICSKASDTVLLMKESVRELQS
ALRRRKGGEFSIEGNVAGYTCCRKKMKKEVAKSLSSLKQMENKSGTSPILDLDQHLSSVV
RVLREASLITTSIFQQLLLFLSAPVLKPKPTKWSLVSRLAHKGVIVCEAQGKKINELESV
DIAVCNLLVQNPSKDPEAEKIQSAHKRLEALDMSIEGLENGLGCLFRRLIQTRVSLLNIL
SH

Transcript Sequence

Transcript ID

VIT_00s1235g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:38073749:38074693:-1 gene:VIT_00s1235g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCAAATTTGAACTTCTCTCTGATGAAAAGAGCAACCATGGCTGCATTTTTGCCAAGGGCT
GATAGCCGCTACCATGTTCGATCCATTAGCCTGCCTACTAGATCACATCCCAGTACGGTC
AAGGTTGAAGAACAGCTGAACAAGCTTAAAGCTTGTGAGGCTTCGTCTTCATCACAGGCA
GAAAAAATTTGCAGGGGTCTATTTGGCCTTGTGGAGTTGTATAGATGCGTAGAGGAACTC
CTAAATTTGCCACTGACCCAACAAGCTCTAGCCCAGTACCAACATGAGAAATGGGTGAAC
GAGCTGCTAGATGGATCAGTAAAATACTTGGATATATGCAGCAAAGCAAGCGACACTGTG
TTATTGATGAAAGAAAGTGTCAGGGAACTCCAATCTGCCCTTAGGCGAAGGAAGGGAGGG
GAGTTCAGCATTGAAGGCAATGTTGCTGGTTACACTTGCTGCAGAAAGAAGATGAAGAAG
GAGGTTGCAAAGTCCCTTTCATCATTGAAGCAAATGGAAAACAAATCCGGGACATCGCCT
ATCTTGGATCTCGATCAGCACCTCTCTTCAGTGGTTAGAGTTCTCAGGGAAGCAAGTCTG
ATCACCACTTCCATCTTTCAACAGCTGTTGCTGTTCCTCTCTGCGCCTGTGTTGAAACCA
AAGCCTACCAAATGGTCATTGGTCTCAAGACTGGCGCACAAAGGAGTAATAGTATGTGAA
GCCCAAGGGAAGAAGATCAATGAATTAGAAAGTGTGGATATTGCAGTTTGCAACCTACTA
GTGCAGAATCCAAGCAAGGATCCTGAGGCAGAGAAGATTCAGTCTGCACACAAAAGATTG
GAGGCTTTGGATATGAGCATTGAAGGCCTTGAAAATGGATTGGGGTGCTTGTTTAGGCGG
TTGATCCAAACAAGAGTCTCCCTCCTCAATATACTTTCTCACTAG