Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s1188g00010.t01
CDS Infomation

cds chromosome:12X:Un:37731112:37733432:1 gene:VIT_00s1188g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGAGCAGTGATAGTTCTGCTGATGGGTTACGGAAAAACCGACTTGTCCTAGCTGAC
CTGACAAATCAAACAGGGAAAAGGGGTTTTCAGTTTATTTCGGGTAACAGGGGTGTTAAG
TCTGGGGATGGGTATGGCAACATTGTGGACTACAAGCAGGGAGATTTAGAGTTTGCAAAG
CGAGTATGCCAAGGGGTGGAAAATTTGATGAAGGGGAAATGCAATACCAATTGTGGATTA
AATGGTGATGACGAGGATTTGTCTTTGTTAAAGGGTAAGAAGGTTTGTGGTTTGCGGGAA
AATGTCTCGTCTCTGATCTCAAACATTCCCAAAGAAATCAAGGAGCCTTCCAACTTGTTG
GACAACAGCACTGGCATTGCTTTGGGCGGTGTTGTTATACCTTCTGATAAGGAAGTAGGC
AATGCATCAAGAGATAGTTGTCCTTCTACTGGTTCAATGCCCACAGGATCGGAACCGAGC
GAAAGTGAGGGTTATAATTTTGGAGAAAAATGTCAAGATGATGATCAAATAATTGCTTCT
GATGTTACACAAAAGGGTCCCTCACTTGGATCTTGTGGAAACGATGGCAAAGGTGCACCT
GTTGTTGATATGCCAAATAGATATGGTTCTGTTGATTTCTCGAGATTTGCTGAGTCACAA
GGGTCTAAATCTTTTGAATTGGGGAGATGCACAGGACTCAAGAATGATGCTTGTTCTAAT
CTAAATGTTGATGCTAACATGCTCAAGGCCTGCTCTTGTCCTTTTTGCTTGAAAGCTGCT
TATATTTGGTCGGATCTTCATTACCAGGATATCAAGGGTCGGATTGCTGCATTAAAGAAG
AGTCAAAAGGAAGCAAGCATTTTGGTTCAAAGAAGTTGTAGGGCTAAGGAGACTGATGCA
CATGGTCATGTGAATCCCAATAAAGCTTCTAAATTAGAATCTGAGCTTATGGGTCAGTGG
AGGTCGCTCTTTCTCAGTATGGGGGATATACTTGCTCACGAAAACGGCCAGCTTCAAAGC
AGTTTTCTCACACTAAAGGATTTGAGGGAAAATTGCAAGACTAATCTGGAGTTGACTAAT
CGGATGCCTTCTGATAAACAGTAG

Peptide Sequence

PEP ID

VIT_00s1188g00010.t01
PEP Infomation

pep chromosome:12X:Un:37731112:37733432:1 gene:VIT_00s1188g00010 transcript:VIT_00s1188g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMSSDSSADGLRKNRLVLADLTNQTGKRGFQFISGNRGVKSGDGYGNIVDYKQGDLEFAK
RVCQGVENLMKGKCNTNCGLNGDDEDLSLLKGKKVCGLRENVSSLISNIPKEIKEPSNLL
DNSTGIALGGVVIPSDKEVGNASRDSCPSTGSMPTGSEPSESEGYNFGEKCQDDDQIIAS
DVTQKGPSLGSCGNDGKGAPVVDMPNRYGSVDFSRFAESQGSKSFELGRCTGLKNDACSN
LNVDANMLKACSCPFCLKAAYIWSDLHYQDIKGRIAALKKSQKEASILVQRSCRAKETDA
HGHVNPNKASKLESELMGQWRSLFLSMGDILAHENGQLQSSFLTLKDLRENCKTNLELTN
RMPSDKQ

Transcript Sequence

Transcript ID

VIT_00s1188g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:37731112:37733432:1 gene:VIT_00s1188g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCACTTTTCAGTTTTCAGTTTGCCCCCAAATATTTTCCATCTCCTCATCCTACCTCTGCC
GGTGTAAGTGAGAGGTGGGGTTTCTTAATATGTGGATCAAAGGGTTAAGAATTCGTTGAT
TTCGAAGAATAGGTGCAGTGGGGTTCGAGTTTATATGTACTGAAAGTTGAATCCAGGATT
AGGTTGGTAGGATCTGTTTCTTAGAAGCGAATTCATGATGAGCAGTGATAGTTCTGCTGA
TGGGTTACGGAAAAACCGACTTGTCCTAGCTGACCTGACAAATCAAACAGGGAAAAGGGG
TTTTCAGTTTATTTCGGGTAACAGGGGTGTTAAGTCTGGGGATGGGTATGGCAACATTGT
GGACTACAAGCAGGGAGATTTAGAGTTTGCAAAGCGAGTATGCCAAGGGGTGGAAAATTT
GATGAAGGGGAAATGCAATACCAATTGTGGATTAAATGGTGATGACGAGGATTTGTCTTT
GTTAAAGGGTAAGAAGGTTTGTGGTTTGCGGGAAAATGTCTCGTCTCTGATCTCAAACAT
TCCCAAAGAAATCAAGGAGCCTTCCAACTTGTTGGACAACAGCACTGGCATTGCTTTGGG
CGGTGTTGTTATACCTTCTGATAAGGAAGTAGGCAATGCATCAAGAGATAGTTGTCCTTC
TACTGGTTCAATGCCCACAGGATCGGAACCGAGCGAAAGTGAGGGTTATAATTTTGGAGA
AAAATGTCAAGATGATGATCAAATAATTGCTTCTGATGTTACACAAAAGGGTCCCTCACT
TGGATCTTGTGGAAACGATGGCAAAGGTGCACCTGTTGTTGATATGCCAAATAGATATGG
TTCTGTTGATTTCTCGAGATTTGCTGAGTCACAAGGGTCTAAATCTTTTGAATTGGGGAG
ATGCACAGGACTCAAGAATGATGCTTGTTCTAATCTAAATGTTGATGCTAACATGCTCAA
GGCCTGCTCTTGTCCTTTTTGCTTGAAAGCTGCTTATATTTGGTCGGATCTTCATTACCA
GGATATCAAGGGTCGGATTGCTGCATTAAAGAAGAGTCAAAAGGAAGCAAGCATTTTGGT
TCAAAGAAGTTGTAGGGCTAAGGAGACTGATGCACATGGTCATGTGAATCCCAATAAAGC
TTCTAAATTAGAATCTGAGCTTATGGGTCAGTGGAGGTCGCTCTTTCTCAGTATGGGGGA
TATACTTGCTCACGAAAACGGCCAGCTTCAAAGCAGTTTTCTCACACTAAAGGATTTGAG
GGAAAATTGCAAGACTAATCTGGAGTTGACTAATCGGATGCCTTCTGATAAACAGTAGTG
TTCTTCTGAAGCTTCTAGTGATCATATGGTTATCAACCCACTCCAATTCCGGTAATTTGT
GTGTGATACCGGCTTAATGTTTAGAAAGTTTCTTGAAGTTTTACCATTCTCACAAAG