Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0878g00020.t01
CDS Infomation

cds chromosome:12X:Un:36421267:36430023:1 gene:VIT_00s0878g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCTGATCCCCCCATCGCTCGGGTCTCTGCAACTCAATGCCCCTTTTTCTTCATTT
CTATCTCCAAAGCACACTATCTTTACATCTCCACATGGGCATGGCTTTGGTTGCGTGTGT
CTCCATAAGACTTGGAGGAGACCACCCTCCATGTTTCTTACCAACAAACCTGTTATTAAA
GATGGGGTTCTGAGTATCAACGGCAAGGATACTCTCACTGGCGTGCCGGACAACGTGGTC
GTCACCCCATTGTCGAATTCGTCTGCTTTTGTGGGAGCCACTTCCACTCTTCCCGATTCT
CGACATGTGTTTAGGCTTGGACTTATTCAGGATATCAGATTGCTATGTCTGTTCAGATTT
AAGCTTTGGTGGATGATACCTCGGATGGGAAATTCTGGACAGGACATTCCCATTGAAACT
CAGATGCTACTTCTGGAAGCAAAGGAAGAACCTGATGGACCTGCCTCTTATATCCTTTTC
TTGCCGGTGTTAGATGGTGATTTTAGAAGCAGCCTGCAGGGGAACCAATCAAACGAACTC
GAATTGTGCGTTGAAAGTGGTGACCCAGCTATAGTCACGTCACGGTCTCTAAAAGCAGTT
TTTGTGAATTGTGGGGACAATCCATTTGATCTGATGAACCAATCTATGAAGACACTAGAG
AAGCATCTTGGAACCTTTTCACATCGAGAGACCAAACAGATGCCTGGAATGTTAGATTGG
TTTGGTTGGTGCACATGGGATGCTTTCTACCATGGGGTTAATCCTCAAGGAATTAGAGAT
GGACTGAAAAGCCTATCTGAGGGTGGGACTCCAGCAAAGTTCTTGATAATAGATGATGGA
TGGCAAGATACTACTAATGAGTTTCAGAAAGAAGGAGAGCCATTTATTGAAGGGTCACAG
TTTGGAGCCAGATTAGTCAGCATCAAAGAAAATAATAAGTTTCGGGAAACTGCGAATGAA
GATCTAAATGAGGCACCTAGTGGTCTTAAAGACTTTGTTTCAGATATTAAGAGCACTTTT
GGCCTTAAGTATGTTTATGTATGGCATGCGCTGTTGGGGTACTGGGGAGGATTTCATCCA
GATGCTCCAGAGGGTAGAAAGTATAATCCAAAATTAAAATTCCCAATACAGTCACCAGGG
AATCTGGCAAATATGAGGGACATATCAATGGATTGCATGGAGAAGTATGGTATTGGAGCA
ATTGATCCAGCTAAAGCATCTGAATTCTATGATGATCTACACAGTTACCTTGTGTCACAG
GATGTGGATGGGGTTAAGGTTGATGTTCAGAACATACTGGAAACTTTGGCAACAGGTTTA
GGAGGCAGAGTCTCACTTACCAGAAAATTCCAACAAGCTCTTGAGAAGTCAATTGCCGCC
AACTTCCAAGACAATAGCATAATCTGCTGCATGGGTCTTAGCACAGATACCCTTTACAAT
GCAAGAAGAAGTGCAATTACGCGGGCATCTGATGATTACTATCCGAAAATCCCAACTACT
CAGTCACTGCACATAGCTGCTGTGGCTTTTAACAGCATATTTCTCGGAGAAGTTGTAGTC
CCAGACTGGGACATGTTCTATAGCCTTCACAGTGCAGCTGAATTTCATGCAGTTGCTCGA
GCTGTTGGGGGTTGTGGGGTCTATGTTAGTGACAAACCGGGGCAGCATGACTTCGAGATA
CTTAGGAGACTTGTACTCCCTGATGGATCAGTGCTGAGAGCCAAATACCCTGGAAGACCA
TCACGAGATTGTTTATTCAATGACCCAGTAATGGATGGAGAGAGTCTTCTGAAGATTTGG
AACTTGAACAAAGTCACAGGAGTTATAGGAGTCTTCAATTGCCAAGGAGCAGGAAGCTGG
CCTTGTCTGGACAATCCTGTTCAGAAAGATGTCAGTCCCAAGCTCTCTGGGCAGGTCTCT
CCTGCAGATATTGAATACTTCGAAGAAGTTGCTCCAACCCCATGGACAGGAGATTGTGCA
GTTTTTTCCTTTAAAGCAGGGTCTTTGTCCCGATTGCCAAAGAGAGGATCATTTGATGTC
AAACTGAAGATCTTGGAGTGTGATGTGTTCACTGTATCTCCCATTAAGGTTTACCATGGA
AAGGTCCATTTTGCAGCAATTGGGTTAATAGATATGTACAATTCAGGTGGAGCAGTTGAG
ACAGTTGAAGCTTTGAATGCTTCTGATAATGGTGGAATAAGCATCAAGGGAAGAGGGGCA
GGTCGGTTTGGGGCATACACCAATGAAAAGCCAAAGCTTTGCTCTGTGAACTCAAAGGAA
GAGGCGTTCACATTTAGAGATGAAGATAATCTTTTGACCATAACAATCCCAAGTGGCACC
AATTTTTGGGAAATTGTTGTTTCCTATTAA

Peptide Sequence

PEP ID

VIT_00s0878g00020.t01
PEP Infomation

pep chromosome:12X:Un:36421267:36430023:1 gene:VIT_00s0878g00020 transcript:VIT_00s0878g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALIPPSLGSLQLNAPFSSFLSPKHTIFTSPHGHGFGCVCLHKTWRRPPSMFLTNKPVIK
DGVLSINGKDTLTGVPDNVVVTPLSNSSAFVGATSTLPDSRHVFRLGLIQDIRLLCLFRF
KLWWMIPRMGNSGQDIPIETQMLLLEAKEEPDGPASYILFLPVLDGDFRSSLQGNQSNEL
ELCVESGDPAIVTSRSLKAVFVNCGDNPFDLMNQSMKTLEKHLGTFSHRETKQMPGMLDW
FGWCTWDAFYHGVNPQGIRDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQKEGEPFIEGSQ
FGARLVSIKENNKFRETANEDLNEAPSGLKDFVSDIKSTFGLKYVYVWHALLGYWGGFHP
DAPEGRKYNPKLKFPIQSPGNLANMRDISMDCMEKYGIGAIDPAKASEFYDDLHSYLVSQ
DVDGVKVDVQNILETLATGLGGRVSLTRKFQQALEKSIAANFQDNSIICCMGLSTDTLYN
ARRSAITRASDDYYPKIPTTQSLHIAAVAFNSIFLGEVVVPDWDMFYSLHSAAEFHAVAR
AVGGCGVYVSDKPGQHDFEILRRLVLPDGSVLRAKYPGRPSRDCLFNDPVMDGESLLKIW
NLNKVTGVIGVFNCQGAGSWPCLDNPVQKDVSPKLSGQVSPADIEYFEEVAPTPWTGDCA
VFSFKAGSLSRLPKRGSFDVKLKILECDVFTVSPIKVYHGKVHFAAIGLIDMYNSGGAVE
TVEALNASDNGGISIKGRGAGRFGAYTNEKPKLCSVNSKEEAFTFRDEDNLLTITIPSGT
NFWEIVVSY

Transcript Sequence

Transcript ID

VIT_00s0878g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:36421267:36430023:1 gene:VIT_00s0878g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TATATAGATAGATGGTGCAAATGCTTTGTACTTGTGTAGAAATTTACATTATGATACCAT
TGCCGCTATCGGAGAGCAAAGGAAAGCCTTGTTTCTGGTTGCAGTGGCAGAGTGGTCCAA
GCAGCAAAAAAACAAGACTAGGATGATGACAGAAGTAAAAAATGTGGCCAATAATGATGA
TAATTCCCATCCTCACAGCCAAGTCAGTCCTTTTCTATCAACTGGGAATCAACTAAGTTC
ACAAAAGTCCTTGTGAGGCCTCCCCTTCGAATTTGAACCTTAAAACCAATAGACACACAC
ACCCCTGACTTTACCATCACCATGGCGCTGATCCCCCCATCGCTCGGGTCTCTGCAACTC
AATGCCCCTTTTTCTTCATTTCTATCTCCAAAGCACACTATCTTTACATCTCCACATGGG
CATGGCTTTGGTTGCGTGTGTCTCCATAAGACTTGGAGGAGACCACCCTCCATGTTTCTT
ACCAACAAACCTGTTATTAAAGATGGGGTTCTGAGTATCAACGGCAAGGATACTCTCACT
GGCGTGCCGGACAACGTGGTCGTCACCCCATTGTCGAATTCGTCTGCTTTTGTGGGAGCC
ACTTCCACTCTTCCCGATTCTCGACATGTGTTTAGGCTTGGACTTATTCAGGATATCAGA
TTGCTATGTCTGTTCAGATTTAAGCTTTGGTGGATGATACCTCGGATGGGAAATTCTGGA
CAGGACATTCCCATTGAAACTCAGATGCTACTTCTGGAAGCAAAGGAAGAACCTGATGGA
CCTGCCTCTTATATCCTTTTCTTGCCGGTGTTAGATGGTGATTTTAGAAGCAGCCTGCAG
GGGAACCAATCAAACGAACTCGAATTGTGCGTTGAAAGTGGTGACCCAGCTATAGTCACG
TCACGGTCTCTAAAAGCAGTTTTTGTGAATTGTGGGGACAATCCATTTGATCTGATGAAC
CAATCTATGAAGACACTAGAGAAGCATCTTGGAACCTTTTCACATCGAGAGACCAAACAG
ATGCCTGGAATGTTAGATTGGTTTGGTTGGTGCACATGGGATGCTTTCTACCATGGGGTT
AATCCTCAAGGAATTAGAGATGGACTGAAAAGCCTATCTGAGGGTGGGACTCCAGCAAAG
TTCTTGATAATAGATGATGGATGGCAAGATACTACTAATGAGTTTCAGAAAGAAGGAGAG
CCATTTATTGAAGGGTCACAGTTTGGAGCCAGATTAGTCAGCATCAAAGAAAATAATAAG
TTTCGGGAAACTGCGAATGAAGATCTAAATGAGGCACCTAGTGGTCTTAAAGACTTTGTT
TCAGATATTAAGAGCACTTTTGGCCTTAAGTATGTTTATGTATGGCATGCGCTGTTGGGG
TACTGGGGAGGATTTCATCCAGATGCTCCAGAGGGTAGAAAGTATAATCCAAAATTAAAA
TTCCCAATACAGTCACCAGGGAATCTGGCAAATATGAGGGACATATCAATGGATTGCATG
GAGAAGTATGGTATTGGAGCAATTGATCCAGCTAAAGCATCTGAATTCTATGATGATCTA
CACAGTTACCTTGTGTCACAGGATGTGGATGGGGTTAAGGTTGATGTTCAGAACATACTG
GAAACTTTGGCAACAGGTTTAGGAGGCAGAGTCTCACTTACCAGAAAATTCCAACAAGCT
CTTGAGAAGTCAATTGCCGCCAACTTCCAAGACAATAGCATAATCTGCTGCATGGGTCTT
AGCACAGATACCCTTTACAATGCAAGAAGAAGTGCAATTACGCGGGCATCTGATGATTAC
TATCCGAAAATCCCAACTACTCAGTCACTGCACATAGCTGCTGTGGCTTTTAACAGCATA
TTTCTCGGAGAAGTTGTAGTCCCAGACTGGGACATGTTCTATAGCCTTCACAGTGCAGCT
GAATTTCATGCAGTTGCTCGAGCTGTTGGGGGTTGTGGGGTCTATGTTAGTGACAAACCG
GGGCAGCATGACTTCGAGATACTTAGGAGACTTGTACTCCCTGATGGATCAGTGCTGAGA
GCCAAATACCCTGGAAGACCATCACGAGATTGTTTATTCAATGACCCAGTAATGGATGGA
GAGAGTCTTCTGAAGATTTGGAACTTGAACAAAGTCACAGGAGTTATAGGAGTCTTCAAT
TGCCAAGGAGCAGGAAGCTGGCCTTGTCTGGACAATCCTGTTCAGAAAGATGTCAGTCCC
AAGCTCTCTGGGCAGGTCTCTCCTGCAGATATTGAATACTTCGAAGAAGTTGCTCCAACC
CCATGGACAGGAGATTGTGCAGTTTTTTCCTTTAAAGCAGGGTCTTTGTCCCGATTGCCA
AAGAGAGGATCATTTGATGTCAAACTGAAGATCTTGGAGTGTGATGTGTTCACTGTATCT
CCCATTAAGGTTTACCATGGAAAGGTCCATTTTGCAGCAATTGGGTTAATAGATATGTAC
AATTCAGGTGGAGCAGTTGAGACAGTTGAAGCTTTGAATGCTTCTGATAATGGTGGAATA
AGCATCAAGGGAAGAGGGGCAGGTCGGTTTGGGGCATACACCAATGAAAAGCCAAAGCTT
TGCTCTGTGAACTCAAAGGAAGAGGCGTTCACATTTAGAGATGAAGATAATCTTTTGACC
ATAACAATCCCAAGTGGCACCAATTTTTGGGAAATTGTTGTTTCCTATTAAGGCCATATG
ACTAGAGAAAAAGCCTACCCTCTCATATCTAGCCAAGTATGGTATGATTTTTGTAAATAG
TCATTTATCTAGTTATTAATCATATATGTAACAACCCACCTATTTTGGAGGAGAGAAGGA
GATGGGTATTGAATATTGATGCAAGTGCAAGTGTTGTATGTTTATGATTGAAAAATGACT
ATACTCCCCCT