Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0790g00020.t01
CDS Infomation

cds chromosome:12X:Un:35411707:35413967:-1 gene:VIT_00s0790g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGTGTCTTCACTTCACTCATCTCTCTCTCTTCTCTTCGTCTTTCTCTTGCTTGTT
ATCGGAATTTTGTTCCCAAGAAGAAGATATGGGAATCTCCCACCGAGCCCGCCTGCAGTT
CCAATTTTAGGTCATCTCCACCTCCTCAAACAACCGGTCCATCGATCTCTACAACGCCTT
TCACTAGAGTACGGTCCAATCTTCTCCCTCCGATTCGGATCCCAGCTCGTTGTCATCGTT
TCCTCTCCCTCCGCCGTCGAAGAATGCTTCACCAAGAACGACGTCGTCTTGGCCAACCGC
CCTCGCTTAGCGTCCGGCAAGTACCTGGGGTTCAACTACACCTCCGTGGTCTCAGCATCA
TACGGCGAACACTGGCGCAACCTCCGCCGCCTCTGCGCCCAGGAAATCTTCTCCTCGAAT
CGCCTCAACATGTTTCTAGGCATCCGCAGGGATGAAGTCAAGCTTCTACTCCTCCGATTG
GCTCGAGATTCGAGGGAGGGTTTTGCAAAGGTAGAGCTGAGACCGATGCTTACAGAGCTA
ACCTTTAATATTATAACGAGGATGGTTGCAGGAAAGCGATACTACGGAGAAGGCGTGGAA
TTTGAGGAGGCTAAGCGTTTTCGGGAGATTATCAGCGAGGCTTTCAAACTGAGTGAGGCA
TCATCAAATCCAACAGATTTTTTGCCCATATTGCGATGGATTGGGTTCGGAGATCATGAG
AAGAAGTTAAAGAAGACCATGAGAGAGACTGAGGTGATCTTGCAGGGTTTGATTGATGAG
CATAGAGGTGGTAATGACAGGGGTTCAGTGGATAATAATTCTATGATCGACCATCTGTTA
TCCTTGCAGACAACAGAACCAGAGTACTACACAGATGACATTATTAAAGGGCTTGTATTG
ATCTTAATTCTTGCTGGAACAGATACTTCAGCAGCGACGATGGAATGGGCAATGACCCTT
CTCCTCAATCATCCGGATGTTTTGAAGAAAGCTAAAGCCGAGTTGGATATTCACGTTGGA
AAGGACCGCTTGATAGAAGAATCTGATCTTCCCGAACTGCGGTACCTTCAAAGGATCATT
TCTGAAACTTTGAGACTATTTCCTGTGGCCCCTCTTTTAGTGCCCCATATGTCCTCAGAT
GACTGTCAAATAGGGGGATTTGATATACCAGGAGGCACATTTTTATTGATAAATGCATGG
GCCATTCACAGAGACCCTCAGGTGTGGGAAGATCCTACAAGTTTCATACCTGAAAGGTTT
CAAAATGGAGAACGTGAGAATTACAAACTACTACCATTTGGAATAGGAAGAAGAGCCTGT
CCTGGAGCAGGCCTAGCTCATCGAGTGGTGGGTTTGGCTTTGGGGTCGTTGATTCAGTGC
TATGACTGGAAGAGGATTAGCAAAACCACTATTGACACCACTGAAGGGAAAGGGCTCACC
ATGCCCAAACTGGAGCCATTAGAAGCCATGTGTAAGGCATGTGAGATTATAAAAACAGGT
TCACTAGAACTAGAAAACAATATCTACAGTTTAGGTACAGCACCGTATGGCGAACACTGG
CGCAACCTCCGCCGCATCAGCACACTTGAAGTATTCTCTTCCAATCGCCTTAACATGTTC
CTAGGCAATCCCAGGGATAAAATCAATCATTTATTAATCGCTTGTCTAGGAACTCCAATC
GAATAA

Peptide Sequence

PEP ID

VIT_00s0790g00020.t01
PEP Infomation

pep chromosome:12X:Un:35411707:35413967:-1 gene:VIT_00s0790g00020 transcript:VIT_00s0790g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEVSSLHSSLSLLFVFLLLVIGILFPRRRYGNLPPSPPAVPILGHLHLLKQPVHRSLQRL
SLEYGPIFSLRFGSQLVVIVSSPSAVEECFTKNDVVLANRPRLASGKYLGFNYTSVVSAS
YGEHWRNLRRLCAQEIFSSNRLNMFLGIRRDEVKLLLLRLARDSREGFAKVELRPMLTEL
TFNIITRMVAGKRYYGEGVEFEEAKRFREIISEAFKLSEASSNPTDFLPILRWIGFGDHE
KKLKKTMRETEVILQGLIDEHRGGNDRGSVDNNSMIDHLLSLQTTEPEYYTDDIIKGLVL
ILILAGTDTSAATMEWAMTLLLNHPDVLKKAKAELDIHVGKDRLIEESDLPELRYLQRII
SETLRLFPVAPLLVPHMSSDDCQIGGFDIPGGTFLLINAWAIHRDPQVWEDPTSFIPERF
QNGERENYKLLPFGIGRRACPGAGLAHRVVGLALGSLIQCYDWKRISKTTIDTTEGKGLT
MPKLEPLEAMCKACEIIKTGSLELENNIYSLGTAPYGEHWRNLRRISTLEVFSSNRLNMF
LGNPRDKINHLLIACLGTPIE

Transcript Sequence

Transcript ID

VIT_00s0790g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:35411707:35413967:-1 gene:VIT_00s0790g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCGACGATACTACCATGGAAGTGTCTTCACTTCACTCATCTCTCTCTCTTCTCTTCGTC
TTTCTCTTGCTTGTTATCGGAATTTTGTTCCCAAGAAGAAGATATGGGAATCTCCCACCG
AGCCCGCCTGCAGTTCCAATTTTAGGTCATCTCCACCTCCTCAAACAACCGGTCCATCGA
TCTCTACAACGCCTTTCACTAGAGTACGGTCCAATCTTCTCCCTCCGATTCGGATCCCAG
CTCGTTGTCATCGTTTCCTCTCCCTCCGCCGTCGAAGAATGCTTCACCAAGAACGACGTC
GTCTTGGCCAACCGCCCTCGCTTAGCGTCCGGCAAGTACCTGGGGTTCAACTACACCTCC
GTGGTCTCAGCATCATACGGCGAACACTGGCGCAACCTCCGCCGCCTCTGCGCCCAGGAA
ATCTTCTCCTCGAATCGCCTCAACATGTTTCTAGGCATCCGCAGGGATGAAGTCAAGCTT
CTACTCCTCCGATTGGCTCGAGATTCGAGGGAGGGTTTTGCAAAGGTAGAGCTGAGACCG
ATGCTTACAGAGCTAACCTTTAATATTATAACGAGGATGGTTGCAGGAAAGCGATACTAC
GGAGAAGGCGTGGAATTTGAGGAGGCTAAGCGTTTTCGGGAGATTATCAGCGAGGCTTTC
AAACTGAGTGAGGCATCATCAAATCCAACAGATTTTTTGCCCATATTGCGATGGATTGGG
TTCGGAGATCATGAGAAGAAGTTAAAGAAGACCATGAGAGAGACTGAGGTGATCTTGCAG
GGTTTGATTGATGAGCATAGAGGTGGTAATGACAGGGGTTCAGTGGATAATAATTCTATG
ATCGACCATCTGTTATCCTTGCAGACAACAGAACCAGAGTACTACACAGATGACATTATT
AAAGGGCTTGTATTGATCTTAATTCTTGCTGGAACAGATACTTCAGCAGCGACGATGGAA
TGGGCAATGACCCTTCTCCTCAATCATCCGGATGTTTTGAAGAAAGCTAAAGCCGAGTTG
GATATTCACGTTGGAAAGGACCGCTTGATAGAAGAATCTGATCTTCCCGAACTGCGGTAC
CTTCAAAGGATCATTTCTGAAACTTTGAGACTATTTCCTGTGGCCCCTCTTTTAGTGCCC
CATATGTCCTCAGATGACTGTCAAATAGGGGGATTTGATATACCAGGAGGCACATTTTTA
TTGATAAATGCATGGGCCATTCACAGAGACCCTCAGGTGTGGGAAGATCCTACAAGTTTC
ATACCTGAAAGGTTTCAAAATGGAGAACGTGAGAATTACAAACTACTACCATTTGGAATA
GGAAGAAGAGCCTGTCCTGGAGCAGGCCTAGCTCATCGAGTGGTGGGTTTGGCTTTGGGG
TCGTTGATTCAGTGCTATGACTGGAAGAGGATTAGCAAAACCACTATTGACACCACTGAA
GGGAAAGGGCTCACCATGCCCAAACTGGAGCCATTAGAAGCCATGTGTAAGGCATGTGAG
ATTATAAAAACAGGTTCACTAGAACTAGAAAACAATATCTACAGTTTAGGTACAGCACCG
TATGGCGAACACTGGCGCAACCTCCGCCGCATCAGCACACTTGAAGTATTCTCTTCCAAT
CGCCTTAACATGTTCCTAGGCAATCCCAGGGATAAAATCAATCATTTATTAATCGCTTGT
CTAGGAACTCCAATCGAATAA