Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0771g00010.t01
CDS Infomation

cds chromosome:12X:Un:35221902:35224326:1 gene:VIT_00s0771g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACCAAATCTCATGGACCCTCCAACGCTTCCGCCACCTACTGAAAACATGCATTGCC
GAGAGAGACCTGTCAACGGGCAAATCACTTCATTCCTTGTATATCAAGTCCTTTATCCCT
CCTTCGACCTACTTCTCCAACCACTTCATCCTCCTCTACTCCAAATGTGGTCGCCTTGCT
TGGGCTCGCAAGGCCTTCCAAGACATTTCAGACCCCAATGTCTTTTCATTCAACGCCATC
ATCGCTGCCTACGCGAAAGAGTCACGCCCACTCATTGCCCACCAGCTGTTCGACCAAATT
CCCGAACCAGACCTTGTTTCCTACAACACCCTCATCTCTGCTTATGCTGACTGCGGGGAG
ACCGCGCCTGCGCTAGGCCTTTTTAGCGGAATGAGAGAGATGGGGCTTGATATGGATGGC
TTCACTCTCTCTGCTGTCATCACGGCTTGCTGTGATGATGTTGGTTTGATCGGTCAGTTG
CATTCGGTGGCGGTTTCGAGTGGGTTTGATTCTTATGTTTCGGTGAACAATGCGCTTCTC
ACGTATTATGGCAAGAACGGGGATTTGGATGACGCGAAGCGGGTGTTTTACGGGATGGGT
GGGATAAGAGATGAGGTGTCTTGGAATTCTATGATTGTGGCGTATGGGCAACACCAGGAA
GGATCAAAAGCGCTGGGATTGTTTCAGGAAATGGTTCGAAGAGGGCTAAATGTTGATATG
TTCACTTTGGCGAGTGTTTTGACTGCGTTTACGTGCTTGGAGGATCTTTCCGGTGGCCTT
CAATTTCATGGTCAGTTGATTAAAACTGGGTTCCATCAGAATTCCCATGTTGGGAGTGGT
TTGATTGATTTATACTCCAAATGTGGAGGTGGTATGTCAGATTGTAGAAAAGTTTTTGAA
GAGATTACTGAACCGGATTTGGTTCTTTGGAACACTATGGTTTCTGGCTACTCCCAGAAT
GAGGAATTCTTAGAAGATGCTCTTGAATGTTTCCGGCAAATGCAAGGGATTGGTTATCGG
CCTAATGATTGCAGCTTTGTGTGCGTGATTAGTGCATGCTCCAATTTGTCATCTCCATCT
CAGGGAAAACAGATCCATTCTTTGGCACTCAAGTCTGACATACCTTCAAATCGAATTTCA
GTGGATAATGCCCTGATTGCAATGTACTCAAAATGTGGAAATCTTCAAGATGCTAGACGG
TTATTTGATAGAATGGCGGAGCATAATACGGTCTCTTTAAATTCGATGATAGCGGGTTAT
GCACAGCATGGGATTGAAATGGAATCATTACATCTTTTCCAGTGGATGCTGGAGAGGCAG
ATTGCTCCCACAAGTATAACTTTCATTTCTGTCCTTTCTGCATGTGCTCACACCGGAAGG
GTTGAGGAAGGTTGGAATTATTTTAATATGATGAAAGAAAAATTCAATATTGAACCCGAA
GCAGAACACTATTCATGCATGATTGACCTTCTGGGACGAGCAGGCAAACTGAGCGAAGCT
GAGAACTTGATTGCGAGGATGCCCTTTAACCCTGGCTCCATTGGCTGGGCATCATTGCTT
GGTGCTTGTAGAACCCATGGGAACATAGAGCTGGCAGTAAAGGCAGCCAACCAGGTTCTT
CAGCTAGAACCTTCAAATGCTGCTCCTTATGTCGTGCTTTCGAATATGTACGCGAGTGCA
GGCAGATGGGAGGAGGTAGCAACCGTTAGAAAGTTTATGCGAGATAGGGGTGTAAAGAAG
AAACCAGGATGCAGTTGGATTGAGGTGAAGAAGAGAATACATGTGTTTGTGGCTGAAGAT
AGTTCACATCCAATGATAAAGGAAATTTATGAGTTCTTGGAGGAGATGTCAGGGAAGATG
AAGCGAGCTGGGTATGTGCCAGATGTGAGATGGGCTTTGGTCAAGGATGATGGAACAAGG
GGAGGAGAGAAGGAGATACGGCTAGGGCACCACAGTGAGAAGCTAGCTGTTGCATTTGGG
TTGATCTCAACTAAAGATGGGGAACCTGTACTCGTGGTGAAGAACCTTCGAATATGTGGA
GATTGTCACAACGCGATCAAATTTATCTCTGCCATAGCTGGGAGGGAGATTACTGTTAGG
GATGCTCACAGGTTTCATTGCTTCAAGGAAGGGCAATGCTCTTGTGGGGATTATTGGTGA

Peptide Sequence

PEP ID

VIT_00s0771g00010.t01
PEP Infomation

pep chromosome:12X:Un:35221902:35224326:1 gene:VIT_00s0771g00010 transcript:VIT_00s0771g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLA
WARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE
TAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALL
TYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDM
FTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFE
EITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPS
QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGY
AQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPE
AEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVL
QLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAED
SSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFG
LISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW

Transcript Sequence

Transcript ID

VIT_00s0771g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:35221902:35224326:1 gene:VIT_00s0771g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACCAAATCTCATGGACCCTCCAACGCTTCCGCCACCTACTGAAAACATGCATTGCC
GAGAGAGACCTGTCAACGGGCAAATCACTTCATTCCTTGTATATCAAGTCCTTTATCCCT
CCTTCGACCTACTTCTCCAACCACTTCATCCTCCTCTACTCCAAATGTGGTCGCCTTGCT
TGGGCTCGCAAGGCCTTCCAAGACATTTCAGACCCCAATGTCTTTTCATTCAACGCCATC
ATCGCTGCCTACGCGAAAGAGTCACGCCCACTCATTGCCCACCAGCTGTTCGACCAAATT
CCCGAACCAGACCTTGTTTCCTACAACACCCTCATCTCTGCTTATGCTGACTGCGGGGAG
ACCGCGCCTGCGCTAGGCCTTTTTAGCGGAATGAGAGAGATGGGGCTTGATATGGATGGC
TTCACTCTCTCTGCTGTCATCACGGCTTGCTGTGATGATGTTGGTTTGATCGGTCAGTTG
CATTCGGTGGCGGTTTCGAGTGGGTTTGATTCTTATGTTTCGGTGAACAATGCGCTTCTC
ACGTATTATGGCAAGAACGGGGATTTGGATGACGCGAAGCGGGTGTTTTACGGGATGGGT
GGGATAAGAGATGAGGTGTCTTGGAATTCTATGATTGTGGCGTATGGGCAACACCAGGAA
GGATCAAAAGCGCTGGGATTGTTTCAGGAAATGGTTCGAAGAGGGCTAAATGTTGATATG
TTCACTTTGGCGAGTGTTTTGACTGCGTTTACGTGCTTGGAGGATCTTTCCGGTGGCCTT
CAATTTCATGGTCAGTTGATTAAAACTGGGTTCCATCAGAATTCCCATGTTGGGAGTGGT
TTGATTGATTTATACTCCAAATGTGGAGGTGGTATGTCAGATTGTAGAAAAGTTTTTGAA
GAGATTACTGAACCGGATTTGGTTCTTTGGAACACTATGGTTTCTGGCTACTCCCAGAAT
GAGGAATTCTTAGAAGATGCTCTTGAATGTTTCCGGCAAATGCAAGGGATTGGTTATCGG
CCTAATGATTGCAGCTTTGTGTGCGTGATTAGTGCATGCTCCAATTTGTCATCTCCATCT
CAGGGAAAACAGATCCATTCTTTGGCACTCAAGTCTGACATACCTTCAAATCGAATTTCA
GTGGATAATGCCCTGATTGCAATGTACTCAAAATGTGGAAATCTTCAAGATGCTAGACGG
TTATTTGATAGAATGGCGGAGCATAATACGGTCTCTTTAAATTCGATGATAGCGGGTTAT
GCACAGCATGGGATTGAAATGGAATCATTACATCTTTTCCAGTGGATGCTGGAGAGGCAG
ATTGCTCCCACAAGTATAACTTTCATTTCTGTCCTTTCTGCATGTGCTCACACCGGAAGG
GTTGAGGAAGGTTGGAATTATTTTAATATGATGAAAGAAAAATTCAATATTGAACCCGAA
GCAGAACACTATTCATGCATGATTGACCTTCTGGGACGAGCAGGCAAACTGAGCGAAGCT
GAGAACTTGATTGCGAGGATGCCCTTTAACCCTGGCTCCATTGGCTGGGCATCATTGCTT
GGTGCTTGTAGAACCCATGGGAACATAGAGCTGGCAGTAAAGGCAGCCAACCAGGTTCTT
CAGCTAGAACCTTCAAATGCTGCTCCTTATGTCGTGCTTTCGAATATGTACGCGAGTGCA
GGCAGATGGGAGGAGGTAGCAACCGTTAGAAAGTTTATGCGAGATAGGGGTGTAAAGAAG
AAACCAGGATGCAGTTGGATTGAGGTGAAGAAGAGAATACATGTGTTTGTGGCTGAAGAT
AGTTCACATCCAATGATAAAGGAAATTTATGAGTTCTTGGAGGAGATGTCAGGGAAGATG
AAGCGAGCTGGGTATGTGCCAGATGTGAGATGGGCTTTGGTCAAGGATGATGGAACAAGG
GGAGGAGAGAAGGAGATACGGCTAGGGCACCACAGTGAGAAGCTAGCTGTTGCATTTGGG
TTGATCTCAACTAAAGATGGGGAACCTGTACTCGTGGTGAAGAACCTTCGAATATGTGGA
GATTGTCACAACGCGATCAAATTTATCTCTGCCATAGCTGGGAGGGAGATTACTGTTAGG
GATGCTCACAGGTTTCATTGCTTCAAGGAAGGGCAATGCTCTTGTGGGGATTATTGGTGA
TGGTTTGGCATGTCCGTTTAACTTTTCAAGTCTCTTGAGCCTTGAACGAAGCAAGCAAGG
CTATATGACACCTGGGGAAGGCAATGACTCACTGAATTTGGGGATACACCACAGTTCCAG
AAATGGCACTGATTGATGGAGAAGCTCATGAAAACCTTGTCAAGAGCGGCTTCTTGTTCC
TTATCTACTGGTCGAGTTTGAAACAATCTTGTTCTTTTTTTCCCAGATCAAATAATCCCC
ACTAGGAAAAGCCCAAGCTGGCTCG