Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0742g00030.t01
CDS Infomation

cds chromosome:12X:Un:34912364:34918288:-1 gene:VIT_00s0742g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGACAAAGAAGCGTGGAGTGCCCACTGCGATTCCAGAGAAAGCAAGCCCAAGGGTG
TGGCTGTATCTTGTACTTCTTACCCTTCAGTACGGAGCTCAGCCTTTGATCTCCAAACGT
TTCATCAGGCGAGAGGTTATTGTTACTTCATCCGTCTTAACATGCGAGGTAGCAAAGGTT
ATCTGTGCCCTATTTCTCATTGCAAGAGGAGGTGGTTTGAAGAAACTATATAATGAATGG
ACTTTAGTTGGCTCATTGACGGCATCAGGACTTCCAGCAGCAATTTATGCATTGCAAAAT
AGTTTGCTGCAGATTTCTTACAAAAATCTTGATTCACTCACATTCTCAATGCTGAACCAA
ACAAAACTTTTCTTCACAGCATTGTTTACATATATAATATTGAGGCAGAAGCAATCAACT
CAACAAATCGGGGCCCTTTTCTTGTTGATAATTGCAGCTGTTCTTCTAAGCATTGGTGAA
GGCTCTAGCAAAGGTTCTAGCGGTAGTAACCCTGACCAAATTTTATTTCATGGAATTGTT
CCTGTCTTGGTTGCTTCTGTTCTCTCAGGTCTTGCATCCGCTCTGTGTCAATGGGCTTCT
CAGGTGAAGAAACACACATCATACATGATGACTATAGAAATGTCTGTTGTGGGAAGCCTG
TGCTTATTGGCCAGCACCTATAAGTCCCCAGATGGAAAAGCTATCAGACAGCATGGATTC
TTTTATGGTTGGACTCCACTAACTTTGATTCCAGTTATATTTAATGCTGTTGGTGGAATT
CTTGTTGGCCTGGTTACATCCTATGCTGGAGGCGTTCGAAAGGGGTTTGTCATTGTTTCC
GCACTTCTGGTGACAGCTTTGCTGCAATTTATATTTGACGGGAAGCCACCTTCGTTTTAT
TGCATTCTGGCTCTCCCCCTTGTGATCACTAGCATTTCAATATATCAGAAATACCCTTAC
CGGGTCAAAAAGAAAGAATCCTAA

Peptide Sequence

PEP ID

VIT_00s0742g00030.t01
PEP Infomation

pep chromosome:12X:Un:34912364:34918288:-1 gene:VIT_00s0742g00030 transcript:VIT_00s0742g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATKKRGVPTAIPEKASPRVWLYLVLLTLQYGAQPLISKRFIRREVIVTSSVLTCEVAKV
ICALFLIARGGGLKKLYNEWTLVGSLTASGLPAAIYALQNSLLQISYKNLDSLTFSMLNQ
TKLFFTALFTYIILRQKQSTQQIGALFLLIIAAVLLSIGEGSSKGSSGSNPDQILFHGIV
PVLVASVLSGLASALCQWASQVKKHTSYMMTIEMSVVGSLCLLASTYKSPDGKAIRQHGF
FYGWTPLTLIPVIFNAVGGILVGLVTSYAGGVRKGFVIVSALLVTALLQFIFDGKPPSFY
CILALPLVITSISIYQKYPYRVKKKES

Transcript Sequence

Transcript ID

VIT_00s0742g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:34912364:34918288:-1 gene:VIT_00s0742g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATCAGACAGCGAAGAAAGAGGAGGAAGGGGAAGAAGAAGGAGGGACCGGGTCTCTCTCT
AGTCGCCATTAATGGCGACAAAGAAGCGTGGAGTGCCCACTGCGATTCCAGAGAAAGCAA
GCCCAAGGGTGTGGCTGTATCTTGTACTTCTTACCCTTCAGTACGGAGCTCAGCCTTTGA
TCTCCAAACGTTTCATCAGGCGAGAGGTTATTGTTACTTCATCCGTCTTAACATGCGAGG
TAGCAAAGGTTATCTGTGCCCTATTTCTCATTGCAAGAGGAGGTGGTTTGAAGAAACTAT
ATAATGAATGGACTTTAGTTGGCTCATTGACGGCATCAGGACTTCCAGCAGCAATTTATG
CATTGCAAAATAGTTTGCTGCAGATTTCTTACAAAAATCTTGATTCACTCACATTCTCAA
TGCTGAACCAAACAAAACTTTTCTTCACAGCATTGTTTACATATATAATATTGAGGCAGA
AGCAATCAACTCAACAAATCGGGGCCCTTTTCTTGTTGATAATTGCAGCTGTTCTTCTAA
GCATTGGTGAAGGCTCTAGCAAAGGTTCTAGCGGTAGTAACCCTGACCAAATTTTATTTC
ATGGAATTGTTCCTGTCTTGGTTGCTTCTGTTCTCTCAGGTCTTGCATCCGCTCTGTGTC
AATGGGCTTCTCAGGTGAAGAAACACACATCATACATGATGACTATAGAAATGTCTGTTG
TGGGAAGCCTGTGCTTATTGGCCAGCACCTATAAGTCCCCAGATGGAAAAGCTATCAGAC
AGCATGGATTCTTTTATGGTTGGACTCCACTAACTTTGATTCCAGTTATATTTAATGCTG
TTGGTGGAATTCTTGTTGGCCTGGTTACATCCTATGCTGGAGGCGTTCGAAAGGGGTTTG
TCATTGTTTCCGCACTTCTGGTGACAGCTTTGCTGCAATTTATATTTGACGGGAAGCCAC
CTTCGTTTTATTGCATTCTGGCTCTCCCCCTTGTGATCACTAGCATTTCAATATATCAGA
AATACCCTTACCGGGTCAAAAAGAAAGAATCCTAAATGTAATCATCACCAGATTAGGGTA
GATCCCAGATCTTCCCCCAAATTGATATGGTTTTCAATTGGTTTAACATGTATGCCTTCT
TGCAGAAAGGAAAAAGGAAAAGGGTGGGGGGGAGGTACCAAGTTTTTTTAT