Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0704g00020.t01
CDS Infomation

cds chromosome:12X:Un:34449874:34451912:-1 gene:VIT_00s0704g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAATCTTCAACCTTCTGTTGATCTTCCTTCTTCCAATCTTCATCATACTTTTTCTT
AGAGAAAGAAGGGGGGTATCTCAAAAGCTTCCTCCTGGTTCTCTAGGCATCCCCATCATA
GGCCAAAGCTTCAGCTTCTTACATGCTCTGAGAAAAAACACAGGTGAAAAATGGCTTCAA
AGTAGAATTCAGAAGTATGGGGCAGTGTCCAAGCTCAGCCTCTTTGGGACTCCTACTGTT
CTTCTCAGTGGGGCAGCTGCAAACAAGTTCATATTCACTAATGATGGGGTGATTCTGGCG
AACCAGCAACCTCAGCCTATTAGAAGGATATTGGGGGATAAGAGTTTGACAGAGTTGAGA
GGTGAAGATCACAGAAGAGTAAGGGGTGCAATTGGGATGTTCTTGAAGCCTGAATCCTTG
AAGAAGTATGTTGGGAAGATTGATGGAGTGGTTAGGCAACATCTTGACATGAATTGGAAG
GGCCACCAAACAGTCAAGGTTTATCCGATGATGAAGCAGCTCATGTTTGATATCATATGC
TCTCTTCTATTTGGTCTAGAACAAGGGAAGGATAGGGAGATGCTTATTCATGATTTTCAC
CTCTTCACACAAGGCCTATGGTCTGTACCAATAAATCTGCCATTCACTCGGTTCAGTAAT
GGCCTAAAAGCAAGCAGAAGGATCAGAAGAGTGGTTAGTGAGCTCATACACGAGAAGAGA
TCAGCAATGGAGCTAGAGCAAGCTTCCCCACAGGATGATTTCATCACTTGCATGCTCAAC
ATCCAGCACCAAAGCAGTCCAGATGAGACGAGCGCAATGACCGAAGAAGAGATTTTGGAT
AATGCTATTGTTGTCATGTTTGCTGGACATGAGACTTCAACAAGCCTTTTAACTTTCCTG
CTATGGTTCCTAGCGAAAGACCCGGTCGCTTATGATGCTATTGTCCATGAGCATGAAGAA
ATAGCAAAGACCAAAGTTTCTGGAGAGCTTCTCAATTGGGATGATCTTTCTAAGATGAAA
CACACATGGAAAGCAGCAATGGAGACTATGAGAATCATCCCTCCCGTATTTGGTGGTTTC
AGGAAAGTCCTCAAAGATTTTGAGTATGGTGGCTACTTGATTCCTAAAGGGTGGCAAGTG
TTTTGGGTTGCAAGTCCAACCCATATGGATGATCAAATCTTTATAGATCAATGGAAGTTC
AACCCAGCTCGATTCGATAACCAAGCATCAATCCCACCTTACAATTTTGTTCCATTTGGA
GGAGGAATGAGGATTTGTCCAGGAAATGAGTTTGTGAGGATTGAATCCTTAGTCTCAATT
CACTATTTAATCACCCAATTTAGATGGAAACTACTCGACGATGAGGATGTTATCACTAGG
GATCCAATGCCAATGCCTCAACAAGGACTATTAGTCTATCTTGAGCCAAAGATTGCACCA
TAG

Peptide Sequence

PEP ID

VIT_00s0704g00020.t01
PEP Infomation

pep chromosome:12X:Un:34449874:34451912:-1 gene:VIT_00s0704g00020 transcript:VIT_00s0704g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSIFNLLLIFLLPIFIILFLRERRGVSQKLPPGSLGIPIIGQSFSFLHALRKNTGEKWLQ
SRIQKYGAVSKLSLFGTPTVLLSGAAANKFIFTNDGVILANQQPQPIRRILGDKSLTELR
GEDHRRVRGAIGMFLKPESLKKYVGKIDGVVRQHLDMNWKGHQTVKVYPMMKQLMFDIIC
SLLFGLEQGKDREMLIHDFHLFTQGLWSVPINLPFTRFSNGLKASRRIRRVVSELIHEKR
SAMELEQASPQDDFITCMLNIQHQSSPDETSAMTEEEILDNAIVVMFAGHETSTSLLTFL
LWFLAKDPVAYDAIVHEHEEIAKTKVSGELLNWDDLSKMKHTWKAAMETMRIIPPVFGGF
RKVLKDFEYGGYLIPKGWQVFWVASPTHMDDQIFIDQWKFNPARFDNQASIPPYNFVPFG
GGMRICPGNEFVRIESLVSIHYLITQFRWKLLDDEDVITRDPMPMPQQGLLVYLEPKIAP

Transcript Sequence

Transcript ID

VIT_00s0704g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:34449874:34451912:-1 gene:VIT_00s0704g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAATCTTCAACCTTCTGTTGATCTTCCTTCTTCCAATCTTCATCATACTTTTTCTT
AGAGAAAGAAGGGGGGTATCTCAAAAGCTTCCTCCTGGTTCTCTAGGCATCCCCATCATA
GGCCAAAGCTTCAGCTTCTTACATGCTCTGAGAAAAAACACAGGTGAAAAATGGCTTCAA
AGTAGAATTCAGAAGTATGGGGCAGTGTCCAAGCTCAGCCTCTTTGGGACTCCTACTGTT
CTTCTCAGTGGGGCAGCTGCAAACAAGTTCATATTCACTAATGATGGGGTGATTCTGGCG
AACCAGCAACCTCAGCCTATTAGAAGGATATTGGGGGATAAGAGTTTGACAGAGTTGAGA
GGTGAAGATCACAGAAGAGTAAGGGGTGCAATTGGGATGTTCTTGAAGCCTGAATCCTTG
AAGAAGTATGTTGGGAAGATTGATGGAGTGGTTAGGCAACATCTTGACATGAATTGGAAG
GGCCACCAAACAGTCAAGGTTTATCCGATGATGAAGCAGCTCATGTTTGATATCATATGC
TCTCTTCTATTTGGTCTAGAACAAGGGAAGGATAGGGAGATGCTTATTCATGATTTTCAC
CTCTTCACACAAGGCCTATGGTCTGTACCAATAAATCTGCCATTCACTCGGTTCAGTAAT
GGCCTAAAAGCAAGCAGAAGGATCAGAAGAGTGGTTAGTGAGCTCATACACGAGAAGAGA
TCAGCAATGGAGCTAGAGCAAGCTTCCCCACAGGATGATTTCATCACTTGCATGCTCAAC
ATCCAGCACCAAAGCAGTCCAGATGAGACGAGCGCAATGACCGAAGAAGAGATTTTGGAT
AATGCTATTGTTGTCATGTTTGCTGGACATGAGACTTCAACAAGCCTTTTAACTTTCCTG
CTATGGTTCCTAGCGAAAGACCCGGTCGCTTATGATGCTATTGTCCATGAGCATGAAGAA
ATAGCAAAGACCAAAGTTTCTGGAGAGCTTCTCAATTGGGATGATCTTTCTAAGATGAAA
CACACATGGAAAGCAGCAATGGAGACTATGAGAATCATCCCTCCCGTATTTGGTGGTTTC
AGGAAAGTCCTCAAAGATTTTGAGTATGGTGGCTACTTGATTCCTAAAGGGTGGCAAGTG
TTTTGGGTTGCAAGTCCAACCCATATGGATGATCAAATCTTTATAGATCAATGGAAGTTC
AACCCAGCTCGATTCGATAACCAAGCATCAATCCCACCTTACAATTTTGTTCCATTTGGA
GGAGGAATGAGGATTTGTCCAGGAAATGAGTTTGTGAGGATTGAATCCTTAGTCTCAATT
CACTATTTAATCACCCAATTTAGATGGAAACTACTCGACGATGAGGATGTTATCACTAGG
GATCCAATGCCAATGCCTCAACAAGGACTATTAGTCTATCTTGAGCCAAAGATTGCACCA
TAG