Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0665g00020.t01
CDS Infomation

cds chromosome:12X:Un:33816946:33819476:-1 gene:VIT_00s0665g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTAGAGTCCGATCTCTGGCTCACGCACCTCATCCACCACTCTCGCCCCTCCACCCTT
TCTTCTTCCTTCATTTCGTTCAAGCCTTGGGGTGGGAACCGCCGGATATCTGGCGGGGTT
GGGCTTTTCCGGCGACACAAGAGACGGGGTGGTGTTTTCTTGTCGGTGAGTTTGTGGGTA
GGTAAGGGGGATGATGGGTGTGTTGGGGAATCGGAGGAGGAGGCAGAGGAGGAAGTGGTG
TTTGCGGTGGAGAAGACACGGAAGAGTGGAGGAGGAGGGGCTGGCGGAGGTGCCATGAAC
ACCACTAAGCATCTCTGGGCTGGTGCTGTGGCTGCTATGGTTTCAAGAACTTTTGTGGCT
CCACTTGAGAGACTAAAGCTGGAATATGTAGTTCGAGGTGAACAGAAGAATCTGTTTGAG
CTGACACAGAAAATTGCGGCTTCTCAAGGGCTGAAGGGCTTTTGGAAAGGAAATTTTGTC
AACATCCTACGCACAGCCCCATTTAAGTCTATCAATTTTTATGCTTACGATACATACAGA
AATCAACTAATGAAACTGTCTGGGAAGGAGGAAAACACAAATTTCGAGAGGTTCCTTGCT
GGGGCTGCAGCTGGAATCACTGCCACCTTGCTGTGTTTACCCTTGGACACTATCAGGACG
AAGATGGTTGCGCCTGGTGGGGAAGCCTTGGGTGGTATCATTGGTGCATTCCGTTACATG
ATCCAAACTGAAGGGTTCTTTTCTCTTTATAAGGGCATAGTACCCTCGATTATAAGCATG
GCACCTTCAGGTGCTGTTTACTATGGTGTTTATGACATACTGAAATCAGCTTTTCTGCAT
TCCCCAGAAGGGAAGAAAAGAATTCTTCACATGAAACAGCAGAGTGAGGAACTGAGTGCT
TTGGAACAACTGGAGTTGGGACCCCTTAGAACATTAGTCTACGGGGCGATTGCTGGTTGT
TGTTCTGAAGTTGCCACATACCCATTTGAAGTTGTGAGGAGACACCTTCAAATGCAAGTT
CAAGCAACAAAAATGAGTGCATTGGCAACTACTGTCAAGCTGGTCAAGCAAGGAGGTGTT
CCTGCTCTGTATGCTGGACTAACTCCCAGCTTATTGCAGGTTTTACCATCAGCTGCCATA
AGTTACTTGGTTTACGAGTTTATGAAGATTGTTCTTAAGGTGGAATCCACATGCATCGTC
AATCCTATCAAGAAAAATTCTGGGTTTGCTCCGGCTAGTTGA

Peptide Sequence

PEP ID

VIT_00s0665g00020.t01
PEP Infomation

pep chromosome:12X:Un:33816946:33819476:-1 gene:VIT_00s0665g00020 transcript:VIT_00s0665g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLESDLWLTHLIHHSRPSTLSSSFISFKPWGGNRRISGGVGLFRRHKRRGGVFLSVSLWV
GKGDDGCVGESEEEAEEEVVFAVEKTRKSGGGGAGGGAMNTTKHLWAGAVAAMVSRTFVA
PLERLKLEYVVRGEQKNLFELTQKIAASQGLKGFWKGNFVNILRTAPFKSINFYAYDTYR
NQLMKLSGKEENTNFERFLAGAAAGITATLLCLPLDTIRTKMVAPGGEALGGIIGAFRYM
IQTEGFFSLYKGIVPSIISMAPSGAVYYGVYDILKSAFLHSPEGKKRILHMKQQSEELSA
LEQLELGPLRTLVYGAIAGCCSEVATYPFEVVRRHLQMQVQATKMSALATTVKLVKQGGV
PALYAGLTPSLLQVLPSAAISYLVYEFMKIVLKVESTCIVNPIKKNSGFAPAS

Transcript Sequence

Transcript ID

VIT_00s0665g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:33816946:33819476:-1 gene:VIT_00s0665g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTAGAGTCCGATCTCTGGCTCACGCACCTCATCCACCACTCTCGCCCCTCCACCCTT
TCTTCTTCCTTCATTTCGTTCAAGCCTTGGGGTGGGAACCGCCGGATATCTGGCGGGGTT
GGGCTTTTCCGGCGACACAAGAGACGGGGTGGTGTTTTCTTGTCGGTGAGTTTGTGGGTA
GGTAAGGGGGATGATGGGTGTGTTGGGGAATCGGAGGAGGAGGCAGAGGAGGAAGTGGTG
TTTGCGGTGGAGAAGACACGGAAGAGTGGAGGAGGAGGGGCTGGCGGAGGTGCCATGAAC
ACCACTAAGCATCTCTGGGCTGGTGCTGTGGCTGCTATGGTTTCAAGAACTTTTGTGGCT
CCACTTGAGAGACTAAAGCTGGAATATGTAGTTCGAGGTGAACAGAAGAATCTGTTTGAG
CTGACACAGAAAATTGCGGCTTCTCAAGGGCTGAAGGGCTTTTGGAAAGGAAATTTTGTC
AACATCCTACGCACAGCCCCATTTAAGTCTATCAATTTTTATGCTTACGATACATACAGA
AATCAACTAATGAAACTGTCTGGGAAGGAGGAAAACACAAATTTCGAGAGGTTCCTTGCT
GGGGCTGCAGCTGGAATCACTGCCACCTTGCTGTGTTTACCCTTGGACACTATCAGGACG
AAGATGGTTGCGCCTGGTGGGGAAGCCTTGGGTGGTATCATTGGTGCATTCCGTTACATG
ATCCAAACTGAAGGGTTCTTTTCTCTTTATAAGGGCATAGTACCCTCGATTATAAGCATG
GCACCTTCAGGTGCTGTTTACTATGGTGTTTATGACATACTGAAATCAGCTTTTCTGCAT
TCCCCAGAAGGGAAGAAAAGAATTCTTCACATGAAACAGCAGAGTGAGGAACTGAGTGCT
TTGGAACAACTGGAGTTGGGACCCCTTAGAACATTAGTCTACGGGGCGATTGCTGGTTGT
TGTTCTGAAGTTGCCACATACCCATTTGAAGTTGTGAGGAGACACCTTCAAATGCAAGTT
CAAGCAACAAAAATGAGTGCATTGGCAACTACTGTCAAGCTGGTCAAGCAAGGAGGTGTT
CCTGCTCTGTATGCTGGACTAACTCCCAGCTTATTGCAGGTTTTACCATCAGCTGCCATA
AGTTACTTGGTTTACGAGTTTATGAAGATTGTTCTTAAGGTGGAATCCACATGCATCGTC
AATCCTATCAAGAAAAATTCTGGGTTTGCTCCGGCTAGTTGATGCTCAGAATGAGTAACA
TTTTGTTAGAAAGCAGTTTCTTGAAAGAGAATAATCCTCCCATGCCATCTCCCTTGACAA
AGATCAAAAGAAAAT