Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0620g00020.t01
CDS Infomation

cds chromosome:12X:Un:33087352:33093234:1 gene:VIT_00s0620g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAACCACAAACCCTTTCGATCTCTTGGGCGATGACGACAACGACGACCCCTCTCAG
CTTGCTTCTCATCTGCTCAAGCTCGCGCCTGCTAAGAAATCCTCAGCGCCTCCTCCTCAG
GCCGCTCCTGCGCAGCAGGCTAAGCCGGCTAAGTTGCCCTCTAAGCCTCTTCCCCCGGCT
CAGGCTGTGAGGGAAACAAAGAATGAAGTTGGGCGCGGAGGCGGCCGTGGCGGTGGACGT
GGTTATGGACGTGGACGTGGTGGAGCTGGATTGAACAGAGACTCATTCAATAACGAAAGT
ACGCTTAACAACAATGATGGATTCTCTGGAGGGTACAGACCATCTGAAGAGGGCGATACA
GGCAAATCTTCTGAAAGGCGTGGTTCTGGTGGACCTCGTTCTCCTTACCGTGGTGGTGGT
CGTCGTGGTGGTTTTAGCAATGGAGAGGTTGGGGAGGGGGAACGTCCCCGTAGGGCATAT
GAACGCCGAAGTGGAACTGGGCGTGGAAATGAGATTAAGCGTGATGGAGCTGGTCGAGGG
AACTGGGGAACTCCTGCTGATGAGATTGCTCCGGAGAATGAAGAACCTATCAATGAAACT
GAGAAGAATACAAGTGCTGAGAAGCAGTTGGGAGAGGAAATTGCTGCAGATGCCAACAAG
GAGAATCCTGTCAATGAATCAGAGGAGAAGGAGCCTGAGGATAAGGAGATGACTCTTGAA
GAGTATCAGAAAGTACTTGAGGAGAAGAGGAAGGCTCTACTTGCACTGAAGACTGAGGAG
AGGAAGGTTGATGTCAAAGACTTTGAAGCCATGCAACAGCTTTCAAGCAAGAAGGATAAT
GATGATGTCTTCATTAAGCTGGGTTCTGAAAAGGATAAACGTAAAGAGCTTGCTGACAAA
GAAGAGAGAGCCAAAAAGTCTGTCAGCATAAATGAGTTCCTGAAGCCAGCTGAAGGGGAG
AGGTACTATGGTGGTCGTGGTAGGGGTCGTGGCCGTGGTACAAGAGGAGGATTTGCAGGC
AACACCTACAGCAATGTGGCTGCTCCATCCATTGAAGATCCTGGGCAGTTCCCTACATTG
GGTGGCAAGTGA

Peptide Sequence

PEP ID

VIT_00s0620g00020.t01
PEP Infomation

pep chromosome:12X:Un:33087352:33093234:1 gene:VIT_00s0620g00020 transcript:VIT_00s0620g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATTNPFDLLGDDDNDDPSQLASHLLKLAPAKKSSAPPPQAAPAQQAKPAKLPSKPLPPA
QAVRETKNEVGRGGGRGGGRGYGRGRGGAGLNRDSFNNESTLNNNDGFSGGYRPSEEGDT
GKSSERRGSGGPRSPYRGGGRRGGFSNGEVGEGERPRRAYERRSGTGRGNEIKRDGAGRG
NWGTPADEIAPENEEPINETEKNTSAEKQLGEEIAADANKENPVNESEEKEPEDKEMTLE
EYQKVLEEKRKALLALKTEERKVDVKDFEAMQQLSSKKDNDDVFIKLGSEKDKRKELADK
EERAKKSVSINEFLKPAEGERYYGGRGRGRGRGTRGGFAGNTYSNVAAPSIEDPGQFPTL
GGK

Transcript Sequence

Transcript ID

VIT_00s0620g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:33087352:33093234:1 gene:VIT_00s0620g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCGCATCGGCTAGGGTTTTCACTATCATTTTTCTTCCCGTAGCCATCATCGTTGCAGTG
TTCTGTGAGATCTATCCATCCATCCATGGAGTTTAGCAATTTGTAGGGTTTCGTGGTTGC
TGTTACGGTCGTAAACGTAGGGTTTTGTCTGAGAGTTGTTGTAACTACAACAACAAGTAA
TGGCAACCACAAACCCTTTCGATCTCTTGGGCGATGACGACAACGACGACCCCTCTCAGC
TTGCTTCTCATCTGCTCAAGCTCGCGCCTGCTAAGAAATCCTCAGCGCCTCCTCCTCAGG
CCGCTCCTGCGCAGCAGGCTAAGCCGGCTAAGTTGCCCTCTAAGCCTCTTCCCCCGGCTC
AGGCTGTGAGGGAAACAAAGAATGAAGTTGGGCGCGGAGGCGGCCGTGGCGGTGGACGTG
GTTATGGACGTGGACGTGGTGGAGCTGGATTGAACAGAGACTCATTCAATAACGAAAGTA
CGCTTAACAACAATGATGGATTCTCTGGAGGGTACAGACCATCTGAAGAGGGCGATACAG
GCAAATCTTCTGAAAGGCGTGGTTCTGGTGGACCTCGTTCTCCTTACCGTGGTGGTGGTC
GTCGTGGTGGTTTTAGCAATGGAGAGGTTGGGGAGGGGGAACGTCCCCGTAGGGCATATG
AACGCCGAAGTGGAACTGGGCGTGGAAATGAGATTAAGCGTGATGGAGCTGGTCGAGGGA
ACTGGGGAACTCCTGCTGATGAGATTGCTCCGGAGAATGAAGAACCTATCAATGAAACTG
AGAAGAATACAAGTGCTGAGAAGCAGTTGGGAGAGGAAATTGCTGCAGATGCCAACAAGG
AGAATCCTGTCAATGAATCAGAGGAGAAGGAGCCTGAGGATAAGGAGATGACTCTTGAAG
AGTATCAGAAAGTACTTGAGGAGAAGAGGAAGGCTCTACTTGCACTGAAGACTGAGGAGA
GGAAGGTTGATGTCAAAGACTTTGAAGCCATGCAACAGCTTTCAAGCAAGAAGGATAATG
ATGATGTCTTCATTAAGCTGGGTTCTGAAAAGGATAAACGTAAAGAGCTTGCTGACAAAG
AAGAGAGAGCCAAAAAGTCTGTCAGCATAAATGAGTTCCTGAAGCCAGCTGAAGGGGAGA
GGTACTATGGTGGTCGTGGTAGGGGTCGTGGCCGTGGTACAAGAGGAGGATTTGCAGGCA
ACACCTACAGCAATGTGGCTGCTCCATCCATTGAAGATCCTGGGCAGTTCCCTACATTGG
GTGGCAAGTGAGATGTCAGCTCTTGCAGCCTGCTGCTCCTGCTCGATGTCTCTTTGGTTT
CTGCTTGTTTGGGAATTCGTTCTTGTGATAGGGAGTGGCAGGATATCAACAGGAATAAAG
GCATTTCCTGTATTAAAATTTAAAACCATTTTAACCGTTGTCTTTTTTGAGTGTAAATTT
TAGATGTTTCTCCATAGGCTTACTGCCTATGGTTTCCTTGACTTTTGACATGCATGCTTA
CATCTTTTCCTTTTTTCCTTTTCTTTTTCCCTTTAAAATTAGGGCATATGGGCTGTTT