Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0620g00010.t01
CDS Infomation

cds chromosome:12X:Un:33079930:33081646:1 gene:VIT_00s0620g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGATTGGTGCTACGCTCCCGGCTCAGAACCTCCACCTCTTTCAGGCGAGGCGTGCC
AGCTTTAAATGTAGTGGATCGCCTTTGAACCCTTTAACCAAGCGTCCTCCTTCTGCAAAG
CCTCTGCAAAGGGTCGCAAACATCGAAATGACTCGGCTTCACCTCTCCAACCTTGAAAAA
CTGCTTCAGAAGCAAGAACAGCCTCCTCTGTCCCAACCAGTTGAGAAAATTTCCAGTGAT
GGGTTGCCAGAGAACAAGGGAAGAGGTCTGTTAGAAGGCCTGAGCTTGGCCAGACTCTGG
CCGGAGATGAAGGCGACAGAGGAAATGTCGCCGCGCCATATGAACCGCCTCCAGCGGCTT
CTATCGAAATCGCAGGAGTATTCTCCAAGAAATACTCTCGGCGGGCGGTGGCGCGAGTAC
CATGGCAGCAAAGACTGGTCCGGCATGCTCGACCCTCTCGACGAGAATCTCCGGCGAGAG
GTGGTGCGATACGGCGAGTTCGTGCAAGCCGCGTACCATTCATTCCACTCCAACCCCGCC
ATGTCAGCGGAGGAACCTCCCCTTCCTCGCCATGTAACGCTTCCGGATAGGGCCTATAGA
GTAACGAAGAGCCTCTACGCCACTTCATCAGTAGGGTTGCCGGACTGGGTTGACGACGTG
GCTCCCGATCTCGGGTGGATGACCCAGCGGTCGAGTTGGATGGGCTACGTGGCGGTCTGC
GAGGACCGAAGGGAGATCGCAAGGATGGGGCGTAGAGACATAGTCATCGCCCTCCGTGGA
ACCGCCACGTGTCTAGAATGGGCGGAGAACATGAGGGACTTACTGGTCCAAATCCCGGGT
GAAGATGACTCAGTCCAGGGCCAGGGGCAACCCAAGGTGGAGTGCGGGTTCTTGAGCCTG
TACAAGACTCGTGGAGCTCACGTGCCGAGCCTAGCAGAGTCCGTGGTCCAAGAGATACAG
CGGCTGATGGAGGTATACAAGGGCGAGACCCTCAGCATCACAGTGACCGGGCACAGCCTT
GGTGCGGCCCTAGCCGTGTTAGTAGCCGACGAGTTGAGTACCTGTGACTTCGAGGTGCCC
CCACTAGCGGTTTTCTCCTTTGGAGGGCCTCGAGTGGGCAACAGAGGCTTCGCCAATCGC
ATTAAACAAAACAACGTCAAAGTTCTACGTATAGTAAATTCTCAGGACGTGATAACCAGA
GTCCCAGGAATGTTTGTAAGTGAAGAACTTGACCAGAAGTTGAGAAACACAAAAATGGGC
GGAGTCCTCAATGTGCTGGACAAGATGCCATGGGCATATTCGCACGTAGGGACAGAGCTC
AGAGTGGATACCAAACAATCGCCTTATCTGAAGCCCAATGCCGACGTAGCATGTTGTCAT
GACTTGGAGGCCTACCTGCACTTAGTGGATGGATTCTTGGCTTCCAACAGTCCATTTAGA
GCAAATGCGAAGAGGAGTTTACTAAAGCTGGTACACGAGCAGGGCTCTAATGTGAAAAAA
CTGTACACAAGGAAGGCCCCGGCCTTGAATTTGAATCTTGAAAGGGATAGAATGCCCATG
TCTCCCTGTTTGCCCAGCCCATCCTGA

Peptide Sequence

PEP ID

VIT_00s0620g00010.t01
PEP Infomation

pep chromosome:12X:Un:33079930:33081646:1 gene:VIT_00s0620g00010 transcript:VIT_00s0620g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQIGATLPAQNLHLFQARRASFKCSGSPLNPLTKRPPSAKPLQRVANIEMTRLHLSNLEK
LLQKQEQPPLSQPVEKISSDGLPENKGRGLLEGLSLARLWPEMKATEEMSPRHMNRLQRL
LSKSQEYSPRNTLGGRWREYHGSKDWSGMLDPLDENLRREVVRYGEFVQAAYHSFHSNPA
MSAEEPPLPRHVTLPDRAYRVTKSLYATSSVGLPDWVDDVAPDLGWMTQRSSWMGYVAVC
EDRREIARMGRRDIVIALRGTATCLEWAENMRDLLVQIPGEDDSVQGQGQPKVECGFLSL
YKTRGAHVPSLAESVVQEIQRLMEVYKGETLSITVTGHSLGAALAVLVADELSTCDFEVP
PLAVFSFGGPRVGNRGFANRIKQNNVKVLRIVNSQDVITRVPGMFVSEELDQKLRNTKMG
GVLNVLDKMPWAYSHVGTELRVDTKQSPYLKPNADVACCHDLEAYLHLVDGFLASNSPFR
ANAKRSLLKLVHEQGSNVKKLYTRKAPALNLNLERDRMPMSPCLPSPS

Transcript Sequence

Transcript ID

VIT_00s0620g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:33079930:33081646:1 gene:VIT_00s0620g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGATTGGTGCTACGCTCCCGGCTCAGAACCTCCACCTCTTTCAGGCGAGGCGTGCC
AGCTTTAAATGTAGTGGATCGCCTTTGAACCCTTTAACCAAGCGTCCTCCTTCTGCAAAG
CCTCTGCAAAGGGTCGCAAACATCGAAATGACTCGGCTTCACCTCTCCAACCTTGAAAAA
CTGCTTCAGAAGCAAGAACAGCCTCCTCTGTCCCAACCAGTTGAGAAAATTTCCAGTGAT
GGGTTGCCAGAGAACAAGGGAAGAGGTCTGTTAGAAGGCCTGAGCTTGGCCAGACTCTGG
CCGGAGATGAAGGCGACAGAGGAAATGTCGCCGCGCCATATGAACCGCCTCCAGCGGCTT
CTATCGAAATCGCAGGAGTATTCTCCAAGAAATACTCTCGGCGGGCGGTGGCGCGAGTAC
CATGGCAGCAAAGACTGGTCCGGCATGCTCGACCCTCTCGACGAGAATCTCCGGCGAGAG
GTGGTGCGATACGGCGAGTTCGTGCAAGCCGCGTACCATTCATTCCACTCCAACCCCGCC
ATGTCAGCGGAGGAACCTCCCCTTCCTCGCCATGTAACGCTTCCGGATAGGGCCTATAGA
GTAACGAAGAGCCTCTACGCCACTTCATCAGTAGGGTTGCCGGACTGGGTTGACGACGTG
GCTCCCGATCTCGGGTGGATGACCCAGCGGTCGAGTTGGATGGGCTACGTGGCGGTCTGC
GAGGACCGAAGGGAGATCGCAAGGATGGGGCGTAGAGACATAGTCATCGCCCTCCGTGGA
ACCGCCACGTGTCTAGAATGGGCGGAGAACATGAGGGACTTACTGGTCCAAATCCCGGGT
GAAGATGACTCAGTCCAGGGCCAGGGGCAACCCAAGGTGGAGTGCGGGTTCTTGAGCCTG
TACAAGACTCGTGGAGCTCACGTGCCGAGCCTAGCAGAGTCCGTGGTCCAAGAGATACAG
CGGCTGATGGAGGTATACAAGGGCGAGACCCTCAGCATCACAGTGACCGGGCACAGCCTT
GGTGCGGCCCTAGCCGTGTTAGTAGCCGACGAGTTGAGTACCTGTGACTTCGAGGTGCCC
CCACTAGCGGTTTTCTCCTTTGGAGGGCCTCGAGTGGGCAACAGAGGCTTCGCCAATCGC
ATTAAACAAAACAACGTCAAAGTTCTACGTATAGTAAATTCTCAGGACGTGATAACCAGA
GTCCCAGGAATGTTTGTAAGTGAAGAACTTGACCAGAAGTTGAGAAACACAAAAATGGGC
GGAGTCCTCAATGTGCTGGACAAGATGCCATGGGCATATTCGCACGTAGGGACAGAGCTC
AGAGTGGATACCAAACAATCGCCTTATCTGAAGCCCAATGCCGACGTAGCATGTTGTCAT
GACTTGGAGGCCTACCTGCACTTAGTGGATGGATTCTTGGCTTCCAACAGTCCATTTAGA
GCAAATGCGAAGAGGAGTTTACTAAAGCTGGTACACGAGCAGGGCTCTAATGTGAAAAAA
CTGTACACAAGGAAGGCCCCGGCCTTGAATTTGAATCTTGAAAGGGATAGAATGCCCATG
TCTCCCTGTTTGCCCAGCCCATCCTGAAACTTGGAAACTTACCACAAATTACCTGTACAA
ACCCCTGGATAAGTACTTACCCACCATCCCTTCTCCAATTATTTATTCAAATTTCATTAC
CAACTTACAAAATTCTAATCCAAACATGATGGGATTA