Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0616g00010.t01
CDS Infomation

cds chromosome:12X:Un:32993289:32998707:-1 gene:VIT_00s0616g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACGGCGTTCCGAGACCGTGAGGGGTACTCCACCTGGAATTTTGCTCATAAAAAGC
ATAAGAGGCAAAGAGTGGCGACAAGGAACGTACAGATATGTGGTTCTCTTAATCACATTT
ATAGCATATGCTTGTTACCATGCTTCTCGAAAACCCAGTAGTATAGTCAAGAGTGTAATG
GACCCAGATCCTAAAATGATCATTGGGAAGGATCCCTGGCCAGTGGGTGAGATATTTGTA
AAGGAGAAATGGTTGGATAGTGGCATTAACAGAACAAGAAAAGAGGGATGGGCTCCCTTT
AATGGAACAGATGGGACCTCGAAATTGGGTGAGATTGATGTTGCATTTCTTGCATGTTAC
TCGTTGGGAATGTATGTTGCAGGGCATCTGGGTGATACACTGGACCTTCGGCTGTTTTTG
ACATCTGGAATGATTGGAAGTGGCTCCTTTGTTGTGCTTTTCGGAATGGGTTATTTTTGG
GACATTCATGTGTTCTGGTTTTATCTTCTTATGCAAATGATCGCGGGTTTGTTTCAAGCA
ACTGGCTGGCCCTCTGTCGTTGCTGTTATCGGTAATTGGTTTGGCAAGAGAAAGAGGGGT
TTGATAATGGGTGTATGGAATGCTCATACGTCAGTAGGGAATATTTCAGGGTCTCTTCTT
GCTGCTAGTGTTCTGGAGTATGGATGGGGCTGGTCTTTCATACTTCCTGGTTTCCTAATC
ATTTTGGGAGGGATAATGGTTTTCTTGTTTTTGCCTGCTTATCCTGAAGATATCGGTGTA
TATACAGATTCTACTGATGAAGAAGCTCAGGTAGAAAGAGGAAATTCGGAGCAGAGAGTG
ACAAATGTCCCTCGAAATGGGTCAGTAAGTAGGAGAAGTGTTGGGCTTGTTCAAGCTTGT
TTAATACCAGGAGTGATACCTTTTGCATTGTGCCTTTTCTTTGCAAAGCTTGTGGCATAC
ACATTTCTGTATTGGTTACCGTTTTATATAAGTCAAACAGCAATTGGTGGGGAATACATG
TCTGTGAAATCTGCTGGAAATCTTTCTACTTTGTTTGATGTCGGGGGCATTGTTGGTGGA
ATCTTTGCCGGCTATATATCTGATAAACTTAATGCTCGGGCTATTATAGCAGCCAGCTTT
ATGTATGCTGCAATCCCTTCAATGCTCCTATACCGCTTATATGGGAGCATTTCTCAGACC
TTGAACATTGTACTGATGATGACTGCTGGCTTGTTTGTAAATGGGCCCTATGCACTTATC
ACAACTGCAGTTTCTGCGGATCTTGGTACGCACAAATCTCTTAGAGGGGATTCTCGAGCA
CTGGCAACAGTTACTGCCATTATTGATGGAACTGGATCAGTTGGTGCAGCTCTTGGTCCT
CTTCTTACTGGTTTTCTTTCAACAAAGGGATGGAATGCGGTATTCACAATGCTAATTGCT
TGTGCTCTTATTGCGGGATTACTTTTATCACGTCTTGTCTTTGATGAAATTACTGAGAAA
ATGTGCAAGCCAAGGCCTCTATCTAGTGAGGAGCAAAGTTTTGCAGCTCCAGCATCTCAA
CCCCTTCTGAGGGACCAAAGACGATAA

Peptide Sequence

PEP ID

VIT_00s0616g00010.t01
PEP Infomation

pep chromosome:12X:Un:32993289:32998707:-1 gene:VIT_00s0616g00010 transcript:VIT_00s0616g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MARRSETVRGTPPGILLIKSIRGKEWRQGTYRYVVLLITFIAYACYHASRKPSSIVKSVM
DPDPKMIIGKDPWPVGEIFVKEKWLDSGINRTRKEGWAPFNGTDGTSKLGEIDVAFLACY
SLGMYVAGHLGDTLDLRLFLTSGMIGSGSFVVLFGMGYFWDIHVFWFYLLMQMIAGLFQA
TGWPSVVAVIGNWFGKRKRGLIMGVWNAHTSVGNISGSLLAASVLEYGWGWSFILPGFLI
ILGGIMVFLFLPAYPEDIGVYTDSTDEEAQVERGNSEQRVTNVPRNGSVSRRSVGLVQAC
LIPGVIPFALCLFFAKLVAYTFLYWLPFYISQTAIGGEYMSVKSAGNLSTLFDVGGIVGG
IFAGYISDKLNARAIIAASFMYAAIPSMLLYRLYGSISQTLNIVLMMTAGLFVNGPYALI
TTAVSADLGTHKSLRGDSRALATVTAIIDGTGSVGAALGPLLTGFLSTKGWNAVFTMLIA
CALIAGLLLSRLVFDEITEKMCKPRPLSSEEQSFAAPASQPLLRDQRR

Transcript Sequence

Transcript ID

VIT_00s0616g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:32993289:32998707:-1 gene:VIT_00s0616g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTATAAGGATGGCACGGCGTTCCGAGACCGTGAGGGGTACTCCACCTGGAATTTTGCTC
ATAAAAAGCATAAGAGGCAAAGAGTGGCGACAAGGAACGTACAGATATGTGGTTCTCTTA
ATCACATTTATAGCATATGCTTGTTACCATGCTTCTCGAAAACCCAGTAGTATAGTCAAG
AGTGTAATGGACCCAGATCCTAAAATGATCATTGGGAAGGATCCCTGGCCAGTGGGTGAG
ATATTTGTAAAGGAGAAATGGTTGGATAGTGGCATTAACAGAACAAGAAAAGAGGGATGG
GCTCCCTTTAATGGAACAGATGGGACCTCGAAATTGGGTGAGATTGATGTTGCATTTCTT
GCATGTTACTCGTTGGGAATGTATGTTGCAGGGCATCTGGGTGATACACTGGACCTTCGG
CTGTTTTTGACATCTGGAATGATTGGAAGTGGCTCCTTTGTTGTGCTTTTCGGAATGGGT
TATTTTTGGGACATTCATGTGTTCTGGTTTTATCTTCTTATGCAAATGATCGCGGGTTTG
TTTCAAGCAACTGGCTGGCCCTCTGTCGTTGCTGTTATCGGTAATTGGTTTGGCAAGAGA
AAGAGGGGTTTGATAATGGGTGTATGGAATGCTCATACGTCAGTAGGGAATATTTCAGGG
TCTCTTCTTGCTGCTAGTGTTCTGGAGTATGGATGGGGCTGGTCTTTCATACTTCCTGGT
TTCCTAATCATTTTGGGAGGGATAATGGTTTTCTTGTTTTTGCCTGCTTATCCTGAAGAT
ATCGGTGTATATACAGATTCTACTGATGAAGAAGCTCAGGTAGAAAGAGGAAATTCGGAG
CAGAGAGTGACAAATGTCCCTCGAAATGGGTCAGTAAGTAGGAGAAGTGTTGGGCTTGTT
CAAGCTTGTTTAATACCAGGAGTGATACCTTTTGCATTGTGCCTTTTCTTTGCAAAGCTT
GTGGCATACACATTTCTGTATTGGTTACCGTTTTATATAAGTCAAACAGCAATTGGTGGG
GAATACATGTCTGTGAAATCTGCTGGAAATCTTTCTACTTTGTTTGATGTCGGGGGCATT
GTTGGTGGAATCTTTGCCGGCTATATATCTGATAAACTTAATGCTCGGGCTATTATAGCA
GCCAGCTTTATGTATGCTGCAATCCCTTCAATGCTCCTATACCGCTTATATGGGAGCATT
TCTCAGACCTTGAACATTGTACTGATGATGACTGCTGGCTTGTTTGTAAATGGGCCCTAT
GCACTTATCACAACTGCAGTTTCTGCGGATCTTGGTACGCACAAATCTCTTAGAGGGGAT
TCTCGAGCACTGGCAACAGTTACTGCCATTATTGATGGAACTGGATCAGTTGGTGCAGCT
CTTGGTCCTCTTCTTACTGGTTTTCTTTCAACAAAGGGATGGAATGCGGTATTCACAATG
CTAATTGCTTGTGCTCTTATTGCGGGATTACTTTTATCACGTCTTGTCTTTGATGAAATT
ACTGAGAAAATGTGCAAGCCAAGGCCTCTATCTAGTGAGGAGCAAAGTTTTGCAGCTCCA
GCATCTCAACCCCTTCTGAGGGACCAAAGACGATAA