Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0586g00020.t01
CDS Infomation

cds chromosome:12X:Un:32391628:32400392:1 gene:VIT_00s0586g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCAGCGGCCAAACATCCCACTCCTTGGCATTTCGGGTGATGCGACTATGCAGACCC
TCCTTCCACGTCGACAATCCCCTCCGCCTTGACCCCGCCGATCTCCTCGCCGGCGAAGAC
ATCTTCGACGATCCGCTGGCCGCTTCCGACCTTCCCCGTCTCCTCCACAATCACACCCTC
AAATCCAACGACTCTGATCTCACCTACCGCACCAGATTCCTCCTCAATGATCCCTCCGAC
GCCATGGGCCTCTCTGGCCTCCTCGTCCTCCCTCAGTCGTTCGGAGCGATTTATCTAGGA
GAGACTTTTTGCAGCTATATTAGCATCAACAACAGTTCTAATTTTGAAGTTAGGGATGTT
GTAATCAAGGCAGAAATTCAAACGGAGAAGCAGAGAATACTGTTGTTGGATACATCAAAG
TCGCCAGTTGAGTCAATACGAGCTGGGGGCCGTTATGATTTCATTGTGGAACATGACGTG
AAGGAACTTGGGGCACACACTTTGGTCTGCAGTGCTTTGTACAATGATGGGGATGGAGAG
CGTAAATATTTACCGCAGTTTTTCAAGTTTGTGGTTGCTAATCCACTTTCAGTTAAGACA
AAGGTTCGCATTGTCAAGGACAATACATTTTTGGAGGCTTGCATAGAAAATCATACAAAA
TCAAACCTTTATATGGACCAAGTTGAATTTGAGCCATCTCAGCATTGGACTGCAACAGTA
CTAAAAGCTGGTGAAGGCCTTTCAGACAACGATTCTCCGACTAGGGAGATATTTAAGCAA
CCAATTCTCATCAGATCTGGAGGAGGAATTCAGAATTATCTGTATCAGTTGAAATTGTCC
TCACAGGGCTCTGCACAAATGAAAGTTGATGGAAGTAATGTTCTTGGTAAACTTCAAATA
ACATGGCGTACAAACTTGGGTGAACCTGGCCGCTTACAGACACAGCAAATTCTTGGTAGT
CCCATCACACGCAAAGAGATAGAGTTGCAGGTCATGGAGGTTCCATCAGTTACCATCTTG
GAAAGACCCTTTTTGGTACACTTGAATCTCACAAACCAGACAGACAGGACAATGGGCCCT
TTTGAAGTTTGGTTATCACAAAGTGATTCCCGGGAGGAGCAGGTTGTTATGGTTAATGGC
CTCCGAGCAATGGCCTTACCTCAGGTGGAAGCTTTCTGCTCCACAGATTTTCGTCTGAAC
TTGATTGCCACCAAACTTGGAGTTCAGAAAATCACAGGGATCACGGTATTTGACATTAGA
GAGAAAAGAACTTATGAACCCTTGCCAGATTTGGAGATATTTGTGGATTCAGTCTGA

Peptide Sequence

PEP ID

VIT_00s0586g00020.t01
PEP Infomation

pep chromosome:12X:Un:32391628:32400392:1 gene:VIT_00s0586g00020 transcript:VIT_00s0586g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSGQTSHSLAFRVMRLCRPSFHVDNPLRLDPADLLAGEDIFDDPLAASDLPRLLHNHTL
KSNDSDLTYRTRFLLNDPSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVRDV
VIKAEIQTEKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCSALYNDGDGE
RKYLPQFFKFVVANPLSVKTKVRIVKDNTFLEACIENHTKSNLYMDQVEFEPSQHWTATV
LKAGEGLSDNDSPTREIFKQPILIRSGGGIQNYLYQLKLSSQGSAQMKVDGSNVLGKLQI
TWRTNLGEPGRLQTQQILGSPITRKEIELQVMEVPSVTILERPFLVHLNLTNQTDRTMGP
FEVWLSQSDSREEQVVMVNGLRAMALPQVEAFCSTDFRLNLIATKLGVQKITGITVFDIR
EKRTYEPLPDLEIFVDSV

Transcript Sequence

Transcript ID

VIT_00s0586g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:32391628:32400392:1 gene:VIT_00s0586g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCAATAGCAGTTGAGTGAGATTTGGGAGGAGAGAAGAAAAAGAAAGATGAGCAGCGGCC
AAACATCCCACTCCTTGGCATTTCGGGTGATGCGACTATGCAGACCCTCCTTCCACGTCG
ACAATCCCCTCCGCCTTGACCCCGCCGATCTCCTCGCCGGCGAAGACATCTTCGACGATC
CGCTGGCCGCTTCCGACCTTCCCCGTCTCCTCCACAATCACACCCTCAAATCCAACGACT
CTGATCTCACCTACCGCACCAGATTCCTCCTCAATGATCCCTCCGACGCCATGGGCCTCT
CTGGCCTCCTCGTCCTCCCTCAGTCGTTCGGAGCGATTTATCTAGGAGAGACTTTTTGCA
GCTATATTAGCATCAACAACAGTTCTAATTTTGAAGTTAGGGATGTTGTAATCAAGGCAG
AAATTCAAACGGAGAAGCAGAGAATACTGTTGTTGGATACATCAAAGTCGCCAGTTGAGT
CAATACGAGCTGGGGGCCGTTATGATTTCATTGTGGAACATGACGTGAAGGAACTTGGGG
CACACACTTTGGTCTGCAGTGCTTTGTACAATGATGGGGATGGAGAGCGTAAATATTTAC
CGCAGTTTTTCAAGTTTGTGGTTGCTAATCCACTTTCAGTTAAGACAAAGGTTCGCATTG
TCAAGGACAATACATTTTTGGAGGCTTGCATAGAAAATCATACAAAATCAAACCTTTATA
TGGACCAAGTTGAATTTGAGCCATCTCAGCATTGGACTGCAACAGTACTAAAAGCTGGTG
AAGGCCTTTCAGACAACGATTCTCCGACTAGGGAGATATTTAAGCAACCAATTCTCATCA
GATCTGGAGGAGGAATTCAGAATTATCTGTATCAGTTGAAATTGTCCTCACAGGGCTCTG
CACAAATGAAAGTTGATGGAAGTAATGTTCTTGGTAAACTTCAAATAACATGGCGTACAA
ACTTGGGTGAACCTGGCCGCTTACAGACACAGCAAATTCTTGGTAGTCCCATCACACGCA
AAGAGATAGAGTTGCAGGTCATGGAGGTTCCATCAGTTACCATCTTGGAAAGACCCTTTT
TGGTACACTTGAATCTCACAAACCAGACAGACAGGACAATGGGCCCTTTTGAAGTTTGGT
TATCACAAAGTGATTCCCGGGAGGAGCAGGTTGTTATGGTTAATGGCCTCCGAGCAATGG
CCTTACCTCAGGTGGAAGCTTTCTGCTCCACAGATTTTCGTCTGAACTTGATTGCCACCA
AACTTGGAGTTCAGAAAATCACAGGGATCACGGTATTTGACATTAGAGAGAAAAGAACTT
ATGAACCCTTGCCAGATTTGGAGATATTTGTGGATTCAGTCTGATTTATTGGCCAGTTGA
CTGTTCCAAGGACTATTTCATGTGGATCTTGAGTATTGTTTTGAGCGAGTGATTTGATGA
TGCGTCCCACATACCATTTGTTAGCTTTCATTAGATCTAGCTTATGAAACCAGGAAGCCC
TAAAGCATGTCAAGCTTGATGATCAGATGCCTGCACTCCAGGTCACAGAGACTGGCTTCT
TGTTCCTACAAGAATTATCCTCAATCTCCAACAAGCCAGATGGATGTACTCTTTTTTTGG
TTTTTCTTTTTCTAATTTAAGTTTTTACTGCTCCTTGTTTCCTACATATCAAATGCAAAC
CCCTATGTTCAATTAGGTTAACGGATTTTTTTCTACACTTACGATGTGAGGAAGCAAAGA
ACTTTCAAACAGAATTATAGAACACTGGTGTATAACTGAACTTCTTGTTGCTGAAGATAT
AATATGAATGGAGCTAAGTAATAGTTCACTCCCGGTCCATGCCTTGGTTGTGATGCAAGT
CAATTCAAGTTGGGCTACTCACTCACAATATTCACTATGGCAGATGTGTTGCTTGGTTGT
AGTTGGGGTG