Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0583g00040.t01
CDS Infomation

cds chromosome:12X:Un:32332576:32338497:-1 gene:VIT_00s0583g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCGAAAATCTTTCAAGGATTCTCTCAAAGTGCTTGAAGCCGATCTTCAGCACGCCAAT
ACTCTGGCGTCGGATTTCCCTAGGGAGTATGATGGTGCCTGCCTTCAGATGAGAATGTCA
TACAGTCCAGCTGCACACCTGTTTCTTTTCCTAGTGCAATGGACTGACTGCCACCTTGCT
GGTGCTCTTGGACTATTAAGGATCCTAATTTACAAGGTTTATGTGGATGGCACAACGACC
ATGTCCACTCATGAAAGAAAAGCAAGTATTAGAGAGTTTTATGCTGTAATTTATCCCTCT
TTACTGCAACTAGAAAGAGGTCTTACCGATACAGAAGATAAGAAGCAAAAGGCAGTGTGC
ATGGAAAGGTACAGAAGAAGAGATGATGAGGAACATAAGCAATATTCAGACGTGGACATT
GAACGAGAAGAAGAGTGTGGTATTTGCATGGAGATGAATAGTAAGATTGTTTTGCCCAAT
TGCAACCATGCCATGTGCTTGAAATGCTACCGAGAATGGCGATCGAGATCACAGTCGTGC
CCCTTCTGTCGTGACAGTCTTAAGAGAGTGAATTCTGGTGATCTCTGGGTATTCACAGAC
AGCAGGGACATAATTGACATGGTTACAGTCACTAGGGAGAATCTCAGAAGGCTTTTCATG
TACATAGACAAGTTGCCTCTGATCATTCCTGATTCCCTTTTTGACCAGTATGATTCTCAT
CTAAGATAG

Peptide Sequence

PEP ID

VIT_00s0583g00040.t01
PEP Infomation

pep chromosome:12X:Un:32332576:32338497:-1 gene:VIT_00s0583g00040 transcript:VIT_00s0583g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRKSFKDSLKVLEADLQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHLA
GALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLERGLTDTEDKKQKAVC
MERYRRRDDEEHKQYSDVDIEREEECGICMEMNSKIVLPNCNHAMCLKCYREWRSRSQSC
PFCRDSLKRVNSGDLWVFTDSRDIIDMVTVTRENLRRLFMYIDKLPLIIPDSLFDQYDSH
LR

Transcript Sequence

Transcript ID

VIT_00s0583g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:32332576:32338497:-1 gene:VIT_00s0583g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTCTGTTTGAAGTGGGGGCGATCGATTGATGGTGGTGGTGTGTGTTTCGTTTTGTGATT
GTTCTTGAGAAAGTTTGGGAGATATAGAGAGAGACCGTGGGGGGAGATGTACATAGCTTT
CCATGCGAAAATCTTTCAAGGATTCTCTCAAAGTGCTTGAAGCCGATCTTCAGCACGCCA
ATACTCTGGCGTCGGATTTCCCTAGGGAGTATGATGGTGCCTGCCTTCAGATGAGAATGT
CATACAGTCCAGCTGCACACCTGTTTCTTTTCCTAGTGCAATGGACTGACTGCCACCTTG
CTGGTGCTCTTGGACTATTAAGGATCCTAATTTACAAGGTTTATGTGGATGGCACAACGA
CCATGTCCACTCATGAAAGAAAAGCAAGTATTAGAGAGTTTTATGCTGTAATTTATCCCT
CTTTACTGCAACTAGAAAGAGGTCTTACCGATACAGAAGATAAGAAGCAAAAGGCAGTGT
GCATGGAAAGGTACAGAAGAAGAGATGATGAGGAACATAAGCAATATTCAGACGTGGACA
TTGAACGAGAAGAAGAGTGTGGTATTTGCATGGAGATGAATAGTAAGATTGTTTTGCCCA
ATTGCAACCATGCCATGTGCTTGAAATGCTACCGAGAATGGCGATCGAGATCACAGTCGT
GCCCCTTCTGTCGTGACAGTCTTAAGAGAGTGAATTCTGGTGATCTCTGGGTATTCACAG
ACAGCAGGGACATAATTGACATGGTTACAGTCACTAGGGAGAATCTCAGAAGGCTTTTCA
TGTACATAGACAAGTTGCCTCTGATCATTCCTGATTCCCTTTTTGACCAGTATGATTCTC
ATCTAAGATAGGTGATTAGTACACAGCCTGAGCCCACTGTCTCATGTGTTTTTCAATGAG
TCTGTAGTTCTCTGTCTGCTTTAATTTTACATAAGGACCGAGATTGATTGGTTCGGTCGA
TCTAGATTTAGTTACAACTGTTCTGCTTTCTTCCCGCTTCTGAGAAGGAAGAAGCAAAGG
CCTGAGTTATTGTGGGCAGGGAGGTGAAGGTAGTGGTCTATTTAGAAGGTTTATGAATTG
TAAGAGAATTTGTACATGTTTGTACAGTTTGAAAGTTTGCCC