Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0580g00010.t01
CDS Infomation

cds chromosome:12X:Un:32235167:32244299:1 gene:VIT_00s0580g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAACTAAATTTGGTGTAGGCTTTCCAAATAAAGGACACCCGTCAGTCCATCCAGCT
ACTTCCCCCCAATCAATCCCCACAAACTCCGGATCACAACACCAAAGCAGTAGTGAAGGA
AGAAAAAATGGTGCAGTGAAAGAGATCTCAAAATCCAAGCACATTCTCACTGTTTCTTTC
TTTCCACGTTTCTGTATGTCTCGACCGCAAAATTATGAGTTCCAAGAATGGTGGAACAAG
CAAAGGGAGAAGCATCACGACCTCTTCATCGACAAATCTGAAACCCAGAGGTTGTTCACT
TCCGTCGAGATCCACACTCCCACCGCCGATCCCGCCGTTGACAAGGAGCGAACCCGGAGC
GCCCGCCAGCTCTCCTGGGTCTGTCTTCTCAAGTTACAGCAACTAGCTAGTTCCATTGCC
TACCTGTCCAATGGCTTTGTCGCCATTCTCCGAACCGCCAATCGGAGAATTGCATCTTCT
TCTGTTGCCGCGGATTCGTCTCGATCTGAATCCAGGCTGTACCACGCAATTAAGGTGTTT
CTGGTTGTGGTTTTGGTTCTGCTCTTGTTTGAGCTTGTTGCTTACTTTAAGGGGTGGCAT
TTCAGTCCGCCGTCCCTCAGTTCGGCGGAGGTGGAGGTGTTGGGGTTGGTTGAGCTTGTG
TACGCCAATTGGTTGAAGATTAGGGCGAATTATCTGGCTCCGCCGTTGCAGAGTTTGACG
AATGTTTGTATTGTTTTGTTCTTGATACAGTCAGTGGATCGGATTGTTTTGATGTTGGGT
TGTTTTTGGATCAAGTTCCGGAAATTGAAGCCGGTTGCGGTGATGGAGTTTTCGGAGAAT
TCGGAGGGGCAGAATGTGCAGGATTATCCCATGGTGTTGGTTCAGATCCCAATGTGCAAT
GAGAGGGAGGTTTACCAGCAATCTATTGCAGCAGTATGTATCCAAGACTGGCCAAGGGAA
AGAATGCTCGTACAAGTATTAGATGATTCTGATGATTTGGATGTTCAACACCTTATCAAG
GCAGAAGTACAGAAATGGCAACAAAGAGGCTTGCGCATATTGTACAGACATCGCCTTATC
CGCACAGGCTACAAGGCAGGGAATCTCAAATCTGCAATGAGCTGTGACTATGTTAAGGAT
TATGAGTTTGTTGCAATCTTTGATGCCGATTTTCAACCAGGGCCAGATTTCTTGAAGAAA
ACTATTCCTTATTTTAAGGGGAATGATGATCTAGCATTGGTCCAAACAAGGTGGGCCTTT
GTAAACAAGGATGAGAATTTGCTTACGAGATTACAGAACATAAACCTGTCCTTCCACTTT
GAGGTTGAACAACAGGTCAATGGTGTGTTCATCAACTTCTTTGGTTTTAATGGAACTGCT
GGTGTATGGAGAATCAAAGCCCTTGAAGATTGTGGTGGCTGGTTGGAACGGACAACTGTT
GAGGACATGGATGTTGCCGTCCGAGCTCACCTTTGTGGATGGAAGTTCATATATCTGAAT
GATGTAAAGTGCCTTTGTGAACTCCCCGAGTCCTATGAGGCATACAAGAAACAGCAACAC
CGTTGGCATTCAGGTCCAATGCAATTGTTCCGCTTGTGCTTCTTTGACATACTCCGTTCA
AAGGTGAGTTCAGCCAAGAAAGCCAACTTAATACTTCTTTTCTTCCTCTTGCGGAAGCTT
ATCCTGCCCTTTTATTCATTCACCCTCTTCTGCATTATCCTCCCCCTGACCATGTTCTTG
CCTGAAGCTCAGTTGCCAGCTTGGGTGGTTTGTTATGTCCCTGGAATCATGTCCATCTTG
AATATTGTTCCGGCACCACGGTCATTCCCATTTATAGTCCCCTACCTTCTATTTGAGAAT
ACCATGTCAGTGACCAAATTCAATGCCATGATATCAGGGCTGTTTCGGTTTGGGAGTTCT
TATGAATGGATAGTTACAAAGAAATTGGGAAGATCCTCAGAGGCAGACCTAGTTGCATTT
GCTGAGAAAGAATCTGACCCTCTTGTGGAAGGCTCCAGTCTCCACAGGTCGTCCTCAGAC
CCAGGCATTTTAGAGCTGAACAAACTAGAAATGACCAAGAAAACTGGAAAAACCAAAAGA
AACCGTTTATACAGGAAAGAACTTGCTCTTGCCTTTATTTTGTTAACTGCCTCAGTAAGA
AGCTTGTTGTCTGCCCAGGGAATTCACTTCTACTTCCTGCTGTTTCAAGGGATCACCTTT
CTAGTGGTGGGTCTTGATTTGATCGGAGAGCAGGTGAGTTGA

Peptide Sequence

PEP ID

VIT_00s0580g00010.t01
PEP Infomation

pep chromosome:12X:Un:32235167:32244299:1 gene:VIT_00s0580g00010 transcript:VIT_00s0580g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKTKFGVGFPNKGHPSVHPATSPQSIPTNSGSQHQSSSEGRKNGAVKEISKSKHILTVSF
FPRFCMSRPQNYEFQEWWNKQREKHHDLFIDKSETQRLFTSVEIHTPTADPAVDKERTRS
ARQLSWVCLLKLQQLASSIAYLSNGFVAILRTANRRIASSSVAADSSRSESRLYHAIKVF
LVVVLVLLLFELVAYFKGWHFSPPSLSSAEVEVLGLVELVYANWLKIRANYLAPPLQSLT
NVCIVLFLIQSVDRIVLMLGCFWIKFRKLKPVAVMEFSENSEGQNVQDYPMVLVQIPMCN
EREVYQQSIAAVCIQDWPRERMLVQVLDDSDDLDVQHLIKAEVQKWQQRGLRILYRHRLI
RTGYKAGNLKSAMSCDYVKDYEFVAIFDADFQPGPDFLKKTIPYFKGNDDLALVQTRWAF
VNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDCGGWLERTTV
EDMDVAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFFDILRS
KVSSAKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFLPEAQLPAWVVCYVPGIMSIL
NIVPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWIVTKKLGRSSEADLVAF
AEKESDPLVEGSSLHRSSSDPGILELNKLEMTKKTGKTKRNRLYRKELALAFILLTASVR
SLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVS

Transcript Sequence

Transcript ID

VIT_00s0580g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:32235167:32244299:1 gene:VIT_00s0580g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAACTAAATTTGGTGTAGGCTTTCCAAATAAAGGACACCCGTCAGTCCATCCAGCT
ACTTCCCCCCAATCAATCCCCACAAACTCCGGATCACAACACCAAAGCAGTAGTGAAGGA
AGAAAAAATGGTGCAGTGAAAGAGATCTCAAAATCCAAGCACATTCTCACTGTTTCTTTC
TTTCCACGTTTCTGTATGTCTCGACCGCAAAATTATGAGTTCCAAGAATGGTGGAACAAG
CAAAGGGAGAAGCATCACGACCTCTTCATCGACAAATCTGAAACCCAGAGGTTGTTCACT
TCCGTCGAGATCCACACTCCCACCGCCGATCCCGCCGTTGACAAGGAGCGAACCCGGAGC
GCCCGCCAGCTCTCCTGGGTCTGTCTTCTCAAGTTACAGCAACTAGCTAGTTCCATTGCC
TACCTGTCCAATGGCTTTGTCGCCATTCTCCGAACCGCCAATCGGAGAATTGCATCTTCT
TCTGTTGCCGCGGATTCGTCTCGATCTGAATCCAGGCTGTACCACGCAATTAAGGTGTTT
CTGGTTGTGGTTTTGGTTCTGCTCTTGTTTGAGCTTGTTGCTTACTTTAAGGGGTGGCAT
TTCAGTCCGCCGTCCCTCAGTTCGGCGGAGGTGGAGGTGTTGGGGTTGGTTGAGCTTGTG
TACGCCAATTGGTTGAAGATTAGGGCGAATTATCTGGCTCCGCCGTTGCAGAGTTTGACG
AATGTTTGTATTGTTTTGTTCTTGATACAGTCAGTGGATCGGATTGTTTTGATGTTGGGT
TGTTTTTGGATCAAGTTCCGGAAATTGAAGCCGGTTGCGGTGATGGAGTTTTCGGAGAAT
TCGGAGGGGCAGAATGTGCAGGATTATCCCATGGTGTTGGTTCAGATCCCAATGTGCAAT
GAGAGGGAGGTTTACCAGCAATCTATTGCAGCAGTATGTATCCAAGACTGGCCAAGGGAA
AGAATGCTCGTACAAGTATTAGATGATTCTGATGATTTGGATGTTCAACACCTTATCAAG
GCAGAAGTACAGAAATGGCAACAAAGAGGCTTGCGCATATTGTACAGACATCGCCTTATC
CGCACAGGCTACAAGGCAGGGAATCTCAAATCTGCAATGAGCTGTGACTATGTTAAGGAT
TATGAGTTTGTTGCAATCTTTGATGCCGATTTTCAACCAGGGCCAGATTTCTTGAAGAAA
ACTATTCCTTATTTTAAGGGGAATGATGATCTAGCATTGGTCCAAACAAGGTGGGCCTTT
GTAAACAAGGATGAGAATTTGCTTACGAGATTACAGAACATAAACCTGTCCTTCCACTTT
GAGGTTGAACAACAGGTCAATGGTGTGTTCATCAACTTCTTTGGTTTTAATGGAACTGCT
GGTGTATGGAGAATCAAAGCCCTTGAAGATTGTGGTGGCTGGTTGGAACGGACAACTGTT
GAGGACATGGATGTTGCCGTCCGAGCTCACCTTTGTGGATGGAAGTTCATATATCTGAAT
GATGTAAAGTGCCTTTGTGAACTCCCCGAGTCCTATGAGGCATACAAGAAACAGCAACAC
CGTTGGCATTCAGGTCCAATGCAATTGTTCCGCTTGTGCTTCTTTGACATACTCCGTTCA
AAGGTGAGTTCAGCCAAGAAAGCCAACTTAATACTTCTTTTCTTCCTCTTGCGGAAGCTT
ATCCTGCCCTTTTATTCATTCACCCTCTTCTGCATTATCCTCCCCCTGACCATGTTCTTG
CCTGAAGCTCAGTTGCCAGCTTGGGTGGTTTGTTATGTCCCTGGAATCATGTCCATCTTG
AATATTGTTCCGGCACCACGGTCATTCCCATTTATAGTCCCCTACCTTCTATTTGAGAAT
ACCATGTCAGTGACCAAATTCAATGCCATGATATCAGGGCTGTTTCGGTTTGGGAGTTCT
TATGAATGGATAGTTACAAAGAAATTGGGAAGATCCTCAGAGGCAGACCTAGTTGCATTT
GCTGAGAAAGAATCTGACCCTCTTGTGGAAGGCTCCAGTCTCCACAGGTCGTCCTCAGAC
CCAGGCATTTTAGAGCTGAACAAACTAGAAATGACCAAGAAAACTGGAAAAACCAAAAGA
AACCGTTTATACAGGAAAGAACTTGCTCTTGCCTTTATTTTGTTAACTGCCTCAGTAAGA
AGCTTGTTGTCTGCCCAGGGAATTCACTTCTACTTCCTGCTGTTTCAAGGGATCACCTTT
CTAGTGGTGGGTCTTGATTTGATCGGAGAGCAGGTGAGTTGACCTTCCTATCACTATTTT