Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0572g00010.t01
CDS Infomation

cds chromosome:12X:Un:32052121:32054279:-1 gene:VIT_00s0572g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTGATTGCCATAACAATCTCTACGAACTAGCACTTGGCTTCCGGCTATTGAGACAA
GAAGGTTACTATGCGAGTGCAGATGTCTTTAACAATCTCAAGGACACAGAGGGAAAGATT
CAAGAAAAACTAAGCGAAGATGTCAAGGGATTAATGGGTTTGTATGAAGCTTCGCAGCTA
AGTATAAAGGGGGAAGATATACTCGAAGAAATCGGAAACTTCAGTAGCCAGCTTCTTAAT
GCATGGAACACGCACAATGATCACAGTCAAGCTAGAATTGTTAGGAACACATTAGGGCAT
CCCCATCATAAGAGCTTGGCAAGGTTCATGGCCAAAAGCTTTCTTAGCGATTTTCAAGGC
ACAGATGGATGGATAAATGTCTTTAGAGAACTAGCAAAAATGGATTTCAACGTAGTTAAA
TCCATACACCAGAAGGAGATGCTTCAGGTTTCCAAATGGTGGAAAGATCTAGGTTTGGCC
AAGGAGTTGAAGTTTGCAAGAAACCAACCACTGAAATGGTACATGTGGCCCTTGGCGGTC
CTCCCGGATCCAAGCTTGTCGGAACAGAGGGTTGAGCTCACAAAACCCATCTCACTAGTC
TACATAATAGATGACATTTTTGATGTTCATGGAACACTTGATGAACTCACTCTCTTCACA
GAAGCTGTCAACAGATGGGAATATGCGGCTGTTGAACAACTACCAGACTACATGAAGATA
TGTTTCAATGCTCTTAATGGAATCACCAATGAAATAAGTTCCAAGGTCTACAATGATCAT
GGGTGGAACCCCATGGAATCTCTTCGAAAGGCATGGGCATGTTTATGCAATGCATTTCTA
GTAGAAGCAAAATGGTTTGCTGATGGACACGTGCCAAAAGCTGATGAGTACTTGAAGAAT
GGGGTCATTAGCTCCGGAGTACATGTGGTGCTAGTTCATATGTTTTTTCTCCTGGGTCAT
GGCATAACCAAGAGAAATGTAGACATTGTGGATGATTTTCCTGAGATTATATCTTCGGTA
GCAAAAATTCTTCGCCTCTGGGATGACTTGGGAAGCGCCAAGGACGAGAATCAGGACGGG
CACGACGGATCATACCTGGAGTGCTACATGAAAGAAAAACCAGGGACTTCCATAGAAAAT
GCCCGATGCCATGTTATGCATACTATTTCAGAGACATGGAAGCGCCTCAACAAGGAATGC
CTTGTTCCAAATCCATTTTCAACGTCTTTTACCAAGGCTTGTCTCAATGTTGCAAGGATG
GTTCCTTTGATGTATAGTTATGATGATAATCAGTGCCTCCCAAGCCTTGAAGAGCACATG
AAGTTGCTTGTCAATGAAAGCATTTCCTCATAA

Peptide Sequence

PEP ID

VIT_00s0572g00010.t01
PEP Infomation

pep chromosome:12X:Un:32052121:32054279:-1 gene:VIT_00s0572g00010 transcript:VIT_00s0572g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSDCHNNLYELALGFRLLRQEGYYASADVFNNLKDTEGKIQEKLSEDVKGLMGLYEASQL
SIKGEDILEEIGNFSSQLLNAWNTHNDHSQARIVRNTLGHPHHKSLARFMAKSFLSDFQG
TDGWINVFRELAKMDFNVVKSIHQKEMLQVSKWWKDLGLAKELKFARNQPLKWYMWPLAV
LPDPSLSEQRVELTKPISLVYIIDDIFDVHGTLDELTLFTEAVNRWEYAAVEQLPDYMKI
CFNALNGITNEISSKVYNDHGWNPMESLRKAWACLCNAFLVEAKWFADGHVPKADEYLKN
GVISSGVHVVLVHMFFLLGHGITKRNVDIVDDFPEIISSVAKILRLWDDLGSAKDENQDG
HDGSYLECYMKEKPGTSIENARCHVMHTISETWKRLNKECLVPNPFSTSFTKACLNVARM
VPLMYSYDDNQCLPSLEEHMKLLVNESISS

Transcript Sequence

Transcript ID

VIT_00s0572g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:32052121:32054279:-1 gene:VIT_00s0572g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTACTACCATTTTCATGGAGAGATTGAAGTGGTACTACAGAGACTACATACGAAATTTAA
CACTATGAGTGATTGCCATAACAATCTCTACGAACTAGCACTTGGCTTCCGGCTATTGAG
ACAAGAAGGTTACTATGCGAGTGCAGATGTCTTTAACAATCTCAAGGACACAGAGGGAAA
GATTCAAGAAAAACTAAGCGAAGATGTCAAGGGATTAATGGGTTTGTATGAAGCTTCGCA
GCTAAGTATAAAGGGGGAAGATATACTCGAAGAAATCGGAAACTTCAGTAGCCAGCTTCT
TAATGCATGGAACACGCACAATGATCACAGTCAAGCTAGAATTGTTAGGAACACATTAGG
GCATCCCCATCATAAGAGCTTGGCAAGGTTCATGGCCAAAAGCTTTCTTAGCGATTTTCA
AGGCACAGATGGATGGATAAATGTCTTTAGAGAACTAGCAAAAATGGATTTCAACGTAGT
TAAATCCATACACCAGAAGGAGATGCTTCAGGTTTCCAAATGGTGGAAAGATCTAGGTTT
GGCCAAGGAGTTGAAGTTTGCAAGAAACCAACCACTGAAATGGTACATGTGGCCCTTGGC
GGTCCTCCCGGATCCAAGCTTGTCGGAACAGAGGGTTGAGCTCACAAAACCCATCTCACT
AGTCTACATAATAGATGACATTTTTGATGTTCATGGAACACTTGATGAACTCACTCTCTT
CACAGAAGCTGTCAACAGATGGGAATATGCGGCTGTTGAACAACTACCAGACTACATGAA
GATATGTTTCAATGCTCTTAATGGAATCACCAATGAAATAAGTTCCAAGGTCTACAATGA
TCATGGGTGGAACCCCATGGAATCTCTTCGAAAGGCATGGGCATGTTTATGCAATGCATT
TCTAGTAGAAGCAAAATGGTTTGCTGATGGACACGTGCCAAAAGCTGATGAGTACTTGAA
GAATGGGGTCATTAGCTCCGGAGTACATGTGGTGCTAGTTCATATGTTTTTTCTCCTGGG
TCATGGCATAACCAAGAGAAATGTAGACATTGTGGATGATTTTCCTGAGATTATATCTTC
GGTAGCAAAAATTCTTCGCCTCTGGGATGACTTGGGAAGCGCCAAGGACGAGAATCAGGA
CGGGCACGACGGATCATACCTGGAGTGCTACATGAAAGAAAAACCAGGGACTTCCATAGA
AAATGCCCGATGCCATGTTATGCATACTATTTCAGAGACATGGAAGCGCCTCAACAAGGA
ATGCCTTGTTCCAAATCCATTTTCAACGTCTTTTACCAAGGCTTGTCTCAATGTTGCAAG
GATGGTTCCTTTGATGTATAGTTATGATGATAATCAGTGCCTCCCAAGCCTTGAAGAGCA
CATGAAGTTGCTTGTCAATGAAAGCATTTCCTCATAA