Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0558g00030.t01
CDS Infomation

cds chromosome:12X:Un:31793999:31799640:-1 gene:VIT_00s0558g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGAAGCTAACCCTTACCTCTCTCCTCCTCCTCCTCCCTCTGATTTTCATCGTATTG
ACTTCAGCTCCGCCGACGATCGCATCAGAAGCGGCGACCAAAGGGTACTCCAAGTCAATC
CCCCGTTTTCTGGGAAAATTCGCGTACCCAAACAGGGGGAAACCATTCCAATATGAGACC
CGATATTTCGAACAGCGTCTCGACCACTTCAGCATCGCCGATCTCCCGAAATTTCGGCAG
CGGTACCTCATCAGCACCCGACACTGGACTGGTCCGGACCGAATGGGCCCAATCTTCTTA
TATTGCGGCAACGAAGGCGACATCGAGTGGTTCGCTGCCAACACCGGCTTCGTCTGGGAT
ATGGCTCCTCGGTTCGGTGCTATGGTCCTCTTCCCTGAACATCGATACTATGGCGAGTCA
ATGCCTTACGGAAGTAGGGATAAGGCATATGCGAATGCAGCTTCCTTGTCCTATCTTACA
GCGGAGCAAGCACTCGCTGATTTTGCAGTATTGGTTACTAATTTGAAACGAAATTTGTCT
GCTGAGGGTTGCCCTGTTGTGTTATTTGGTGGTTCCTATGGTGGAATGTTAGCCGCATGG
ATGAGACTCAAATATCCTCACATTGCAATTGGTGCACTTGCTTCTTCTGCCCCAATTCTT
CAATTTGAAGATATTGTGCCACCAGAAACATTTTATGACATTGTCTCCAATAACTTTAAA
CGTGAAAGTATCAGCTGCTTTGATACTATAAAGAAGTCTTGGGATGTACTAATATCTGAG
GGCCAGAAAAATGATGGGCTTAAGCAACTGACTAAAGCTTTCCGCCTATGTCGGGACTTG
AAAAGGACAGAAGATCTTTACGACTGGTTGGACTCTGCTTATAGTTTTTTGGCAATGGTG
AACTACCCATATCCTTCTGACTTTCTAATGCCTTTGCCTGGACACCCAATAAAAGAGGTG
TGTAGAAAGATGGACAGTTGTCCTGAGGGAACAAGTGTTCTGGAGCGCATATTTGAAGGA
GTAAGTGTCTATTACAACTACACTGGTAAAGTTGAATGCTTTCAGCTTGATGACGATCCT
CATGGCATGGATGGTTGGAACTGGCAGGCATGCACTGAGATGGTTATGCCAATGGCTAGT
AGCCGGGAGTCAAGCATGTTTCCAACATATGATTATAATTACTCCTCTTTTCAAGAGGAG
TGCTGGAAGGATTTCAGTGTGAAACCTAGGCCTACATGGATAACAACAGAATTTGGCGGA
CATGAGTTTAAGACCACATTGAAAGTTTTTGGAAGCAACATTATTTTCTCCAATGGTCTG
TTGGATCCCTGGAGTGGTGGCAGTGTTCTGCAGAATATATCTGAAACTGTTGTTGCTCTT
GTTACAGAAGAAGGTGCACATCACATCGATTTGCGTTCCTCAACTGCTGAGGATCCTGAT
TGGTTGGTCGAGCAGAGAGCATTTGAGGTGAAGCTGATCAAAGGCTGGATTGAAGACTAC
CACCAGAAACGCAATTCAGTTTTCAGCATATAG

Peptide Sequence

PEP ID

VIT_00s0558g00030.t01
PEP Infomation

pep chromosome:12X:Un:31793999:31799640:-1 gene:VIT_00s0558g00030 transcript:VIT_00s0558g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTKLTLTSLLLLLPLIFIVLTSAPPTIASEAATKGYSKSIPRFLGKFAYPNRGKPFQYET
RYFEQRLDHFSIADLPKFRQRYLISTRHWTGPDRMGPIFLYCGNEGDIEWFAANTGFVWD
MAPRFGAMVLFPEHRYYGESMPYGSRDKAYANAASLSYLTAEQALADFAVLVTNLKRNLS
AEGCPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYDIVSNNFK
RESISCFDTIKKSWDVLISEGQKNDGLKQLTKAFRLCRDLKRTEDLYDWLDSAYSFLAMV
NYPYPSDFLMPLPGHPIKEVCRKMDSCPEGTSVLERIFEGVSVYYNYTGKVECFQLDDDP
HGMDGWNWQACTEMVMPMASSRESSMFPTYDYNYSSFQEECWKDFSVKPRPTWITTEFGG
HEFKTTLKVFGSNIIFSNGLLDPWSGGSVLQNISETVVALVTEEGAHHIDLRSSTAEDPD
WLVEQRAFEVKLIKGWIEDYHQKRNSVFSI

Transcript Sequence

Transcript ID

VIT_00s0558g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:31793999:31799640:-1 gene:VIT_00s0558g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTATCAGCTCATCATCAATTCATCGTCACCGAAGCGAATTAACGGTTTCATACTAACT
GTTACCGGGCTGGTAAAATGACGAAGCTAACCCTTACCTCTCTCCTCCTCCTCCTCCCTC
TGATTTTCATCGTATTGACTTCAGCTCCGCCGACGATCGCATCAGAAGCGGCGACCAAAG
GGTACTCCAAGTCAATCCCCCGTTTTCTGGGAAAATTCGCGTACCCAAACAGGGGGAAAC
CATTCCAATATGAGACCCGATATTTCGAACAGCGTCTCGACCACTTCAGCATCGCCGATC
TCCCGAAATTTCGGCAGCGGTACCTCATCAGCACCCGACACTGGACTGGTCCGGACCGAA
TGGGCCCAATCTTCTTATATTGCGGCAACGAAGGCGACATCGAGTGGTTCGCTGCCAACA
CCGGCTTCGTCTGGGATATGGCTCCTCGGTTCGGTGCTATGGTCCTCTTCCCTGAACATC
GATACTATGGCGAGTCAATGCCTTACGGAAGTAGGGATAAGGCATATGCGAATGCAGCTT
CCTTGTCCTATCTTACAGCGGAGCAAGCACTCGCTGATTTTGCAGTATTGGTTACTAATT
TGAAACGAAATTTGTCTGCTGAGGGTTGCCCTGTTGTGTTATTTGGTGGTTCCTATGGTG
GAATGTTAGCCGCATGGATGAGACTCAAATATCCTCACATTGCAATTGGTGCACTTGCTT
CTTCTGCCCCAATTCTTCAATTTGAAGATATTGTGCCACCAGAAACATTTTATGACATTG
TCTCCAATAACTTTAAACGTGAAAGTATCAGCTGCTTTGATACTATAAAGAAGTCTTGGG
ATGTACTAATATCTGAGGGCCAGAAAAATGATGGGCTTAAGCAACTGACTAAAGCTTTCC
GCCTATGTCGGGACTTGAAAAGGACAGAAGATCTTTACGACTGGTTGGACTCTGCTTATA
GTTTTTTGGCAATGGTGAACTACCCATATCCTTCTGACTTTCTAATGCCTTTGCCTGGAC
ACCCAATAAAAGAGGTGTGTAGAAAGATGGACAGTTGTCCTGAGGGAACAAGTGTTCTGG
AGCGCATATTTGAAGGAGTAAGTGTCTATTACAACTACACTGGTAAAGTTGAATGCTTTC
AGCTTGATGACGATCCTCATGGCATGGATGGTTGGAACTGGCAGGCATGCACTGAGATGG
TTATGCCAATGGCTAGTAGCCGGGAGTCAAGCATGTTTCCAACATATGATTATAATTACT
CCTCTTTTCAAGAGGAGTGCTGGAAGGATTTCAGTGTGAAACCTAGGCCTACATGGATAA
CAACAGAATTTGGCGGACATGAGTTTAAGACCACATTGAAAGTTTTTGGAAGCAACATTA
TTTTCTCCAATGGTCTGTTGGATCCCTGGAGTGGTGGCAGTGTTCTGCAGAATATATCTG
AAACTGTTGTTGCTCTTGTTACAGAAGAAGGTGCACATCACATCGATTTGCGTTCCTCAA
CTGCTGAGGATCCTGATTGGTTGGTCGAGCAGAGAGCATTTGAGGTGAAGCTGATCAAAG
GCTGGATTGAAGACTACCACCAGAAACGCAATTCAGTTTTCAGCATATAGAGCTCGAAGT
TCCATGGGGCTAACATCTGTATGTTGTAGATATCTCTCCTTTTATGCCTCTTTTCAGCTC
CTTACGAAGTGAACACTGCTGGTGTGTTCAATTATGCTTGGGCTAATCTGTTGTGTTTAT
TATCAAAGGACGATATTGTAAGGACTAAGAATATTATTGTAAATAAAGCTCATCTTAACC
CA