Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0533g00020.t01
CDS Infomation

cds chromosome:12X:Un:31460974:31463790:-1 gene:VIT_00s0533g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAAAAGTTTGGCTTCTCTCCTTCTTAATTCTCCTCTCTCACCGCCTTCTTCTTTC
TCTCAATCACTTCACCATCTTCAAGCCAAAACATTCCCACAGAGCCAATCTTACTCTGGA
GTTGGAACCAGAACTAAACCCATTTCTGCATCGATGGTGGAAGCTCAACCCCCTGTCCGA
AAGGAGGATATCATCATCGTCGGTGCCGGAATCGCTGGCCTTGCCACTGCAGTGTCCCTC
CACAGGCTCGGAGTCGGGTCGTTGGTGCTTGAGCAGGCAGAGTCACTTCGCACTGGTGGA
ACCTCACTCACCCTCTTCAAGAATGGGTGGGGAGTATTAGATGCAATGGGAGTGGGAAAT
GATCTCAGGAGCCAATTCCTTGAAATCCAAGGGATGGTGGTAAAATCAGAAGATGGTAGG
GAGCTGCGCTCCTTCAGGTTCAAAGATGAAGATGAAAGCCAAGAGGTCCGCGCGGTGGAG
AGGAGAATACTTTTGGAGACTCTTGCTAATCAATTGCCAACAGATTCAATTCACTTTTCT
TCAAAGCTGGCAAAGATTGAAAGAATTGAGACGGGTGAAACGTTGTTGGAACTTGAGGAT
GGAACCCGACTGAGTGGGAAGATTGTGATTGGCTGTGATGGGATACGCTCTCCGGTAGCG
AAGTGGATGGGGTTTTCTGAGCCTAGGTATGTGGGGCACTGTGCTTTCCGTGGGCTTGGA
TTTTTTCCTGAGAGAATGCCATATGAACCAAAGGTCAACTACGTCTATGGAAGGGGATTA
CGTGCTGGATATGTTCCTGTTTCTCCAACAAAAGTTTATTGGTTCATCTGCTTCAACAGC
CCATCCCCAGGTCCAAAGATAACTGATCCATCAGTGCTGAAGAAGCAGGCTAGAGAACTG
GTTAGAAACTGGCCTTCAGAGCTGTTGAACATCATAGATCTGACACCAGATGACACAATC
ATTAGAACTCCCCTGGTAGACCGGTGGCTGTGGCCTGCCATAAGCCCTCCCGCCTCATCA
GGTGGAGTTGTGCTGGTCGGGGATGCTTGGCACCCAATGACTCCCAATCTTGGGCAAGGC
GCTTGTTGTGCATTGGAAGATGCAGTAGTTCTCGCAAAAAAGCTCTCAGATGCACTCAGG
TTAGGGCCCGAATCTGTGGAAGGTGCACTCAGATTGTATGGAAGCGAAAGGTGGCCTCGT
ATCTTTCCATTAACGATGCGTGCAAATCTTGTGGGATCACTCCTGCAGTGGGACAACCCA
GTTGTGTGTTCTGTCAGGAACAATGTCATCGTACCTAAGCTGGTTAGGCTTGGACCACTA
TTGGAACATACCAATTTTGAGTTTGAGCCTCTATAA

Peptide Sequence

PEP ID

VIT_00s0533g00020.t01
PEP Infomation

pep chromosome:12X:Un:31460974:31463790:-1 gene:VIT_00s0533g00020 transcript:VIT_00s0533g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKSLASLLLNSPLSPPSSFSQSLHHLQAKTFPQSQSYSGVGTRTKPISASMVEAQPPVR
KEDIIIVGAGIAGLATAVSLHRLGVGSLVLEQAESLRTGGTSLTLFKNGWGVLDAMGVGN
DLRSQFLEIQGMVVKSEDGRELRSFRFKDEDESQEVRAVERRILLETLANQLPTDSIHFS
SKLAKIERIETGETLLELEDGTRLSGKIVIGCDGIRSPVAKWMGFSEPRYVGHCAFRGLG
FFPERMPYEPKVNYVYGRGLRAGYVPVSPTKVYWFICFNSPSPGPKITDPSVLKKQAREL
VRNWPSELLNIIDLTPDDTIIRTPLVDRWLWPAISPPASSGGVVLVGDAWHPMTPNLGQG
ACCALEDAVVLAKKLSDALRLGPESVEGALRLYGSERWPRIFPLTMRANLVGSLLQWDNP
VVCSVRNNVIVPKLVRLGPLLEHTNFEFEPL

Transcript Sequence

Transcript ID

VIT_00s0533g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:31460974:31463790:-1 gene:VIT_00s0533g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCATGCCCCAACCTGCCTCCTCCTCTCTTCCCATACGAACCATATCCAATACAGGTGC
ACCACCATTGAACCGCCACTCAGCATCCATGGCTAAAAGTTTGGCTTCTCTCCTTCTTAA
TTCTCCTCTCTCACCGCCTTCTTCTTTCTCTCAATCACTTCACCATCTTCAAGCCAAAAC
ATTCCCACAGAGCCAATCTTACTCTGGAGTTGGAACCAGAACTAAACCCATTTCTGCATC
GATGGTGGAAGCTCAACCCCCTGTCCGAAAGGAGGATATCATCATCGTCGGTGCCGGAAT
CGCTGGCCTTGCCACTGCAGTGTCCCTCCACAGGCTCGGAGTCGGGTCGTTGGTGCTTGA
GCAGGCAGAGTCACTTCGCACTGGTGGAACCTCACTCACCCTCTTCAAGAATGGGTGGGG
AGTATTAGATGCAATGGGAGTGGGAAATGATCTCAGGAGCCAATTCCTTGAAATCCAAGG
GATGGTGGTAAAATCAGAAGATGGTAGGGAGCTGCGCTCCTTCAGGTTCAAAGATGAAGA
TGAAAGCCAAGAGGTCCGCGCGGTGGAGAGGAGAATACTTTTGGAGACTCTTGCTAATCA
ATTGCCAACAGATTCAATTCACTTTTCTTCAAAGCTGGCAAAGATTGAAAGAATTGAGAC
GGGTGAAACGTTGTTGGAACTTGAGGATGGAACCCGACTGAGTGGGAAGATTGTGATTGG
CTGTGATGGGATACGCTCTCCGGTAGCGAAGTGGATGGGGTTTTCTGAGCCTAGGTATGT
GGGGCACTGTGCTTTCCGTGGGCTTGGATTTTTTCCTGAGAGAATGCCATATGAACCAAA
GGTCAACTACGTCTATGGAAGGGGATTACGTGCTGGATATGTTCCTGTTTCTCCAACAAA
AGTTTATTGGTTCATCTGCTTCAACAGCCCATCCCCAGGTCCAAAGATAACTGATCCATC
AGTGCTGAAGAAGCAGGCTAGAGAACTGGTTAGAAACTGGCCTTCAGAGCTGTTGAACAT
CATAGATCTGACACCAGATGACACAATCATTAGAACTCCCCTGGTAGACCGGTGGCTGTG
GCCTGCCATAAGCCCTCCCGCCTCATCAGGTGGAGTTGTGCTGGTCGGGGATGCTTGGCA
CCCAATGACTCCCAATCTTGGGCAAGGCGCTTGTTGTGCATTGGAAGATGCAGTAGTTCT
CGCAAAAAAGCTCTCAGATGCACTCAGGTTAGGGCCCGAATCTGTGGAAGGTGCACTCAG
ATTGTATGGAAGCGAAAGGTGGCCTCGTATCTTTCCATTAACGATGCGTGCAAATCTTGT
GGGATCACTCCTGCAGTGGGACAACCCAGTTGTGTGTTCTGTCAGGAACAATGTCATCGT
ACCTAAGCTGGTTAGGCTTGGACCACTATTGGAACATACCAATTTTGAGTTTGAGCCTCT
ATAATTGGCAGAGAATTTCAGGCCAAAGAAATACACTTATATAAAAGATCTGTAACTCAA
TGTAAAGGCACCTCAGCGTCTTTTATATTCAGGACAGATATAACATTGTTTCGAATCCTG
CAGACAAAAGTTGTATTATGTTGTATACTTGGACGAGAGTTCAGTAGACATGAAGTTAAT
TGTTATACCA