Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0531g00050.t01
CDS Infomation

cds chromosome:12X:Un:31407648:31413510:1 gene:VIT_00s0531g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATACCCCCTTATTTATTTCTCCTGATCCACATCCACATACACGTTCCTCTCTCTGT
AGATTTCTTCCATGGCTCCTCATGATTCAATCAAACCTCGAGTTTTCATTGGGAACAGAT
GTTTGCATCGTGGGCGTTGCGCGGACCCCTATGGGCGGCTTTCTTGGTTTCCTTTCGTCT
TTATCAGCCACCAAGCTTGGCTCCATAGCTATTCGGGGTGCTCTTAGAAGGGCAAATATT
GATCCATCGCTGGTCCAAGAGGTGTTCTTTGGGAACGTTCTGAGTGCAAATTTGGGGCAA
GCTCCGGCAAGACAGGCGGCGTTGGGTGCGGGCATACCGAATTCAGTGGTGTGCACCACT
ATTAACAAAGTCTGTGCTTCAGGGATGAAAGCTATAATGTTTGCTGCACAGTCTATCCAA
TTGGGTGTCAATGATGTAGTTGTGGCTGGTGGCATGGAAAGTATGTCTAATGCGCCTAAA
TACCTAGTATATGCAAGGAATGGATCTCGATTAGGGCATGATACTATTGTTGATGGTATG
ATCAAAGATGGGCTCTGGGACGTTTACAATGATTTTGGAATGGGAATTTGTGCAGAAATA
TGTGCTGATCAGCATACGATAACGAGAGAAGAACAGGATTCTTACTCTATCCAGAGTTTT
GAGCGTGGTATTTCTGCACAAAATAATGGTGCCTTTGCATGGGAAATAATTCCGGTTGAA
GTATCTGGAGGGAGAGGAAAGCCATCTACACTTGTTGATAAGGATGAAGGTCTAGGAAAG
TTTGATGCTGCAAAACTAAGGAAACTTCGACCAAGTTTCAAGGATGGGGGTTCAGTTACT
GCAGGGAATGCTTCTAGCATAAGTGATGGTGCGGCTGCATTAGTGCTAGTGAGTGGTAAG
AAGGCAGTTGAGCTTAGACTCCAAGTGATTGCTAAGATTGCAGGATATGGTGATGCTGCT
CAGGCACCTGAATTGTTTACAACTACCCCAGCCCTTGCAATACCAAAAGCTATTTCTAAT
GCTGGCCTGAAGGCTTCTCAAATTGATTACTATGAAATAAATGAGGCTTTCGCCGTTGTA
GCTCTTGCCAATCAAAAGTTGCTTGGTCTTGATCCTGAAAAGGTCAATGTTCATGGTGGA
GCTGTATCTTTGGGACATCCAATAGGTTGCAGTGGTGCTCGTATCTTGGTCACATTGTTA
GGGATACTAAGACAGAAGAATGGGAAGTATGGAGTTGGTGGTATCTGCAATGGTGGAGGA
GGAGCATCTGCCCTTGTTCTAGAGCTCATGCCAGTTGCAAGGTTGGGACATTCCAAGTTA
TGA

Peptide Sequence

PEP ID

VIT_00s0531g00050.t01
PEP Infomation

pep chromosome:12X:Un:31407648:31413510:1 gene:VIT_00s0531g00050 transcript:VIT_00s0531g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHTPLFISPDPHPHTRSSLCRFLPWLLMIQSNLEFSLGTDVCIVGVARTPMGGFLGFLSS
LSATKLGSIAIRGALRRANIDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT
INKVCASGMKAIMFAAQSIQLGVNDVVVAGGMESMSNAPKYLVYARNGSRLGHDTIVDGM
IKDGLWDVYNDFGMGICAEICADQHTITREEQDSYSIQSFERGISAQNNGAFAWEIIPVE
VSGGRGKPSTLVDKDEGLGKFDAAKLRKLRPSFKDGGSVTAGNASSISDGAAALVLVSGK
KAVELRLQVIAKIAGYGDAAQAPELFTTTPALAIPKAISNAGLKASQIDYYEINEAFAVV
ALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGILRQKNGKYGVGGICNGGG
GASALVLELMPVARLGHSKL

Transcript Sequence

Transcript ID

VIT_00s0531g00050.t01
Transcript Infomation

cdna chromosome:12X:Un:31407648:31413510:1 gene:VIT_00s0531g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGGATAGTCCTGATCCTATTGAAAATACCAGTGGAAGTGAAGACCGGGTTATAAATAATA
CGGATAAAAACATTAATAATTGGAGTCAAATTAAGAGTTCTAGTTATAGTAATGTTGATA
ATTTATTCGGCATCAGGGACATTCGAAATTTCATCTCTGATGACAATTTTTATAGTTAGG
GATAGGAATGGGGCAATTTATTTCATATATTTTGATATTGAAAATCAGGTTTTTGAGATT
GATAACGATAAATCTTTTTTGAGTGAATTAGAAAGTTTTTTTTTATAGTTATTGGAATTC
TAGTTATCTGAATAATGTATCTAAGAGTAATCGTCCCCACTATGATCGTTACATGTATAA
TACTAAATATAGTTGGAATAAACACATTAATAGTTGCATCAATAATTACTCTTTTCTAAA
AATCATATTTTTTACCAAATAAAAAGTGAGTCTCGTGGTCGAGTAAGAATGCACGGAAAA
ACAAAAATAAGTGGCAACTCCAAGTCTTTCATCAAATAAAAAGTGAGTACGGTGATAGAG
TGAAAATATGCACATGAAAAATGCAGATTAATACTTATCATATCCAAATCTTTTATCTTA
TCCTACCGAAACCTTTTATACAATGTGCCTAATCCCCACCGGAAAAGAGAAAAAAAAACC
ATGAGTTGTAAATATTTAATTTTAGTCTATTTAATAAAATTTGGTATGATCCATGAATAG
GTCTGAAATTCAACATATTTTTCGTAAATTCAATCTGGGAGTCGTACAAATTTGATCGGA
ATTAAATTAACTTAAACTATGTCGTTCATTATATAAACTCATGTAAAACTTCACTTGAGT
ATTAAAGAAAATTTGATCGCCAATCACAGAAACGGTTCAATGTACCACACCAGGCAGATA
AGCAGAAGGCACCGTGGAAACTGACACTAGTAACTGCTGATGACGTCTTCTTCCTACTCT
GAGATCAACATTCATGGAGACCATACCCAAGAGTAAAGTCAAAATCAAATGGTGGGTCCC
CAGCAGAGCAGCTGTGTACTGAGTTTCCCAAAGTAGAAAGAGAAGCCCCTTATGCATAGA
AATCTTAACTGCTGCATCATCAAATAAATGGATTCTCATTTGCCAAGTCTATCCGTAGAT
GCATACCCCCTTATTTATTTCTCCTGATCCACATCCACATACACGTTCCTCTCTCTGTAG
ATTTCTTCCATGGCTCCTCATGATTCAATCAAACCTCGAGTTTTCATTGGGAACAGATGT
TTGCATCGTGGGCGTTGCGCGGACCCCTATGGGCGGCTTTCTTGGTTTCCTTTCGTCTTT
ATCAGCCACCAAGCTTGGCTCCATAGCTATTCGGGGTGCTCTTAGAAGGGCAAATATTGA
TCCATCGCTGGTCCAAGAGGTGTTCTTTGGGAACGTTCTGAGTGCAAATTTGGGGCAAGC
TCCGGCAAGACAGGCGGCGTTGGGTGCGGGCATACCGAATTCAGTGGTGTGCACCACTAT
TAACAAAGTCTGTGCTTCAGGGATGAAAGCTATAATGTTTGCTGCACAGTCTATCCAATT
GGGTGTCAATGATGTAGTTGTGGCTGGTGGCATGGAAAGTATGTCTAATGCGCCTAAATA
CCTAGTATATGCAAGGAATGGATCTCGATTAGGGCATGATACTATTGTTGATGGTATGAT
CAAAGATGGGCTCTGGGACGTTTACAATGATTTTGGAATGGGAATTTGTGCAGAAATATG
TGCTGATCAGCATACGATAACGAGAGAAGAACAGGATTCTTACTCTATCCAGAGTTTTGA
GCGTGGTATTTCTGCACAAAATAATGGTGCCTTTGCATGGGAAATAATTCCGGTTGAAGT
ATCTGGAGGGAGAGGAAAGCCATCTACACTTGTTGATAAGGATGAAGGTCTAGGAAAGTT
TGATGCTGCAAAACTAAGGAAACTTCGACCAAGTTTCAAGGATGGGGGTTCAGTTACTGC
AGGGAATGCTTCTAGCATAAGTGATGGTGCGGCTGCATTAGTGCTAGTGAGTGGTAAGAA
GGCAGTTGAGCTTAGACTCCAAGTGATTGCTAAGATTGCAGGATATGGTGATGCTGCTCA
GGCACCTGAATTGTTTACAACTACCCCAGCCCTTGCAATACCAAAAGCTATTTCTAATGC
TGGCCTGAAGGCTTCTCAAATTGATTACTATGAAATAAATGAGGCTTTCGCCGTTGTAGC
TCTTGCCAATCAAAAGTTGCTTGGTCTTGATCCTGAAAAGGTCAATGTTCATGGTGGAGC
TGTATCTTTGGGACATCCAATAGGTTGCAGTGGTGCTCGTATCTTGGTCACATTGTTAGG
GATACTAAGACAGAAGAATGGGAAGTATGGAGTTGGTGGTATCTGCAATGGTGGAGGAGG
AGCATCTGCCCTTGTTCTAGAGCTCATGCCAGTTGCAAGGTTGGGACATTCCAAGTTATG
AAGAAATTGAGTTGTTCCTCAGCTAGCTACTGTGTGACCAAGATATTTTGTGCAACGAAC
ATTTTCTTACCATTACAAATAAAAAGATACTTTCCTTTAACATA