Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0517g00020.t01
CDS Infomation

cds chromosome:12X:Un:31106509:31107546:1 gene:VIT_00s0517g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAACCCATGCCATGTCAGATCAATTAGCTTACCTTCTAGATCCCATCCTACCACT
CTCAAAATCCAAGAGGAGCTTTACAAGCTCAGAAAATGGGAGGCATCATCCACATCAACA
TTGGGGACAATACACAATGGCCTCTCTGGAATGGAAGAGTTGTACAAATGCTTGGATGAT
CTTCTTAGTTTGCAGTCCACCCAACAAGCCATCTCCCACCATCAACATGAGAAATGGGTC
GAAGAATTGTTGGATGAATCTGTAAGCCTTTTAGATGTTTGTTGCAATACAAGGGATGTA
ATATCACAATTTAAGGAAAATGTTGGAGATCTTCAATCTGCTCTCAGGAGGAGAAAAGGA
GATTTGTGCATTGAAAGCAGCATCAACAATTACATTCGTTCAAGAAAGAAGATGAACAAG
GATGCCAAAAAGTTGCTAGCAGCAATGAAGAAGATGGATAACAAAGCTGGGGCCTCTCCA
CTCTTAGATCAAAATCACCAGCTCTCCACAGTGATCAGAGTGCTCAGAGATGTTAATGCA
ATGAGCATATCTATCTTCCAGTCACTTGTGTTGTTCTTGTCCACACCAGTGTTAAAGTCA
AAACCAAGTAGATGGTCGCTGGTTTCAAAATTTATGCAAAAGGGAGTGGTTTCTTGCGAA
GAAAAGCATGAGAATGTGGAAGAGTTGGAGAATATAGATTTTGCACTAAGCAAAATTTCA
AGCGACAGAGCGGACTTGGAGACAATGCAAATTGCTCATAAAGGACTGGGGGCATTGGAG
GTCAGCATTGAAGGCCTTGACAATGGTTTGGAGTGCATGTTTAGGGACTTGATCAAAACA
AGAGCCTCTCTCCTCAACATCATCTCTCACTAA

Peptide Sequence

PEP ID

VIT_00s0517g00020.t01
PEP Infomation

pep chromosome:12X:Un:31106509:31107546:1 gene:VIT_00s0517g00020 transcript:VIT_00s0517g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MANPCHVRSISLPSRSHPTTLKIQEELYKLRKWEASSTSTLGTIHNGLSGMEELYKCLDD
LLSLQSTQQAISHHQHEKWVEELLDESVSLLDVCCNTRDVISQFKENVGDLQSALRRRKG
DLCIESSINNYIRSRKKMNKDAKKLLAAMKKMDNKAGASPLLDQNHQLSTVIRVLRDVNA
MSISIFQSLVLFLSTPVLKSKPSRWSLVSKFMQKGVVSCEEKHENVEELENIDFALSKIS
SDRADLETMQIAHKGLGALEVSIEGLDNGLECMFRDLIKTRASLLNIISH

Transcript Sequence

Transcript ID

VIT_00s0517g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:31106509:31107546:1 gene:VIT_00s0517g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGAAAGAACAGGAACAATGGCTAACCCATGCCATGTCAGATCAATTAGCTTACCTTCTA
GATCCCATCCTACCACTCTCAAAATCCAAGAGGAGCTTTACAAGCTCAGAAAATGGGAGG
CATCATCCACATCAACATTGGGGACAATACACAATGGCCTCTCTGGAATGGAAGAGTTGT
ACAAATGCTTGGATGATCTTCTTAGTTTGCAGTCCACCCAACAAGCCATCTCCCACCATC
AACATGAGAAATGGGTCGAAGAATTGTTGGATGAATCTGTAAGCCTTTTAGATGTTTGTT
GCAATACAAGGGATGTAATATCACAATTTAAGGAAAATGTTGGAGATCTTCAATCTGCTC
TCAGGAGGAGAAAAGGAGATTTGTGCATTGAAAGCAGCATCAACAATTACATTCGTTCAA
GAAAGAAGATGAACAAGGATGCCAAAAAGTTGCTAGCAGCAATGAAGAAGATGGATAACA
AAGCTGGGGCCTCTCCACTCTTAGATCAAAATCACCAGCTCTCCACAGTGATCAGAGTGC
TCAGAGATGTTAATGCAATGAGCATATCTATCTTCCAGTCACTTGTGTTGTTCTTGTCCA
CACCAGTGTTAAAGTCAAAACCAAGTAGATGGTCGCTGGTTTCAAAATTTATGCAAAAGG
GAGTGGTTTCTTGCGAAGAAAAGCATGAGAATGTGGAAGAGTTGGAGAATATAGATTTTG
CACTAAGCAAAATTTCAAGCGACAGAGCGGACTTGGAGACAATGCAAATTGCTCATAAAG
GACTGGGGGCATTGGAGGTCAGCATTGAAGGCCTTGACAATGGTTTGGAGTGCATGTTTA
GGGACTTGATCAAAACAAGAGCCTCTCTCCTCAACATCATCTCTCACTAATGTCAACAGC
CTTCTCTATCTGCAAATCCTGCACAGGCATCCGAATTTTAGAGGATCTGCAAAAGGGTTG
AAGTTTTCAATCCAAAGTCAATGTATATGAGTGTAAGGGAACATAGTTACACAACGAAAT
GCTATTAGAATTTGAACA