Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0516g00020.t01
CDS Infomation

cds chromosome:12X:Un:31055721:31060441:1 gene:VIT_00s0516g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATAGCATCCGTTCCGATCAGTTCGTGTTCCAAACACAACCAAAAGATCTACCAA
GAATGGTTCAACTACGCCGATTCAGATAACGATGGACGCATTACTGGAAATGATGCCACA
AAGTTCTTCGCAATGTCCAACCTTTCCCGTTCGGAACTCAAACAGGTTTGGGCTATTGCA
GATTCCAAACGACAAGGATTTCTTGGTTTCAGGGAGTTCATCACTGCAATGCAGCTGGTT
TCTCTGGCGCAAGCAGGAAATGAGATTACTTCGGACATCCTTAAAACTACAGGCAAGCAG
AATAATATAACATTGTTTAATTTAGAACCTCCATCAATGGAAGGTTTGAATGCCTTACTA
GCTAAAAATAAGGTCTCAACAAATAATGGCGAGCTTGAATTAAATGGAGATTCTAGGCCA
CAGCCATCACCATCAGCTCCTTGGTTCACCTCAAAATCTGTAAAGAAAGCACCTCTTAAT
TCCGTTACATCAATAATAGATGGCTTGAAGAGACTATACAATGAAAAGTTAAAGCCATTG
GAAGTCACCTACCGCTATAATGATTTTGTTTCTCCCTTATTGACACATAGTGACTTTGAT
GCCAAACCCATGGTTATGCTTTTGGGTCAGTATTCAACTGGGAAAACTACATTCATAAAA
CATTTACTCGGATGTAATTTCCCAGGAGCTCACATTGGACCAGAGCCTACAACCGATCGT
TTTGTTGTTGTCATGTCTGGACCTGATGAAAGGAGCATTCCTGGAAATACCATTGCAGTT
AATGCAGAGATGCCATTCAATGGACTGACAACTTTTGGAGGGGCATTTTTATCAAAATTT
GAGTGTTCCCAGATACCACATTCTCTTCTAGAACACATCACCTTTGTGGACACTCCAGGG
GTCCTATCTGGAGAAAAGCAAAGAACACAAAGAAGCTATGATTTCACTGGTGTAATATCT
TGGTTTGCAGCAAAATGTGATCTCATTCTTCTTCTTTTTGATCCCCACAAACTTGATATC
AGTGATGAATTTAAGCGTGTGATTGCATCTCTACGTGGTAATGATGACAAGATACGTGTA
GTTTTGAACAAAGCTGATCAAGTCGATACACAACAACTAATGAGGGTCTATGGTGCATTG
ATGTGGTCACTTGGGAAAGTTTTGAATACTCCCGAGGTTGTGCGAGTTTATATTGGTTCA
TTCAATGACAAGCCTGTGAATGAAGCAGCCGTGGGTCCAATAGGGAAGGATCTTTTTGAG
AAAGAGCAGGATGATCTTCTTGCAGACTTGATAGATATTCCAAAAAAAGCTTGTGATCGT
CGGATCAATGAATTTGTAAAACGAGCTAGAGCTGCCAAGATTCATGCCTATATAATCAGT
CACCTCAAAAAGGAGATGCCTGCAATGATGGGCAAAGCTAAAGCACAACAGCGACTAACC
GATAATCTTGAAGATGAATTTGCAAAGATCCAAAGGGAGTTCCATCTTCCAGCTGGTGAC
TTCCCAAATGTGGAGCACTTTAGGGAGGTTCTGAACGGCTACAGCATCGATAAATTTGAG
AAGCTGAAGCCTAAAATGATACAAGCTGTGGATGACATGCTTGGCTATGATATTCCGGAG
CTCCTGAAGAATTTCAGAAACCCCTATGAGTGA

Peptide Sequence

PEP ID

VIT_00s0516g00020.t01
PEP Infomation

pep chromosome:12X:Un:31055721:31060441:1 gene:VIT_00s0516g00020 transcript:VIT_00s0516g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEIASVPISSCSKHNQKIYQEWFNYADSDNDGRITGNDATKFFAMSNLSRSELKQVWAIA
DSKRQGFLGFREFITAMQLVSLAQAGNEITSDILKTTGKQNNITLFNLEPPSMEGLNALL
AKNKVSTNNGELELNGDSRPQPSPSAPWFTSKSVKKAPLNSVTSIIDGLKRLYNEKLKPL
EVTYRYNDFVSPLLTHSDFDAKPMVMLLGQYSTGKTTFIKHLLGCNFPGAHIGPEPTTDR
FVVVMSGPDERSIPGNTIAVNAEMPFNGLTTFGGAFLSKFECSQIPHSLLEHITFVDTPG
VLSGEKQRTQRSYDFTGVISWFAAKCDLILLLFDPHKLDISDEFKRVIASLRGNDDKIRV
VLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDKPVNEAAVGPIGKDLFE
KEQDDLLADLIDIPKKACDRRINEFVKRARAAKIHAYIISHLKKEMPAMMGKAKAQQRLT
DNLEDEFAKIQREFHLPAGDFPNVEHFREVLNGYSIDKFEKLKPKMIQAVDDMLGYDIPE
LLKNFRNPYE

Transcript Sequence

Transcript ID

VIT_00s0516g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:31055721:31060441:1 gene:VIT_00s0516g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTCTGTGTTGATCGATGGAGATAGCATCCGTTCCGATCAGTTCGTGTTCCAAACACAAC
CAAAAGATCTACCAAGAATGGTTCAACTACGCCGATTCAGATAACGATGGACGCATTACT
GGAAATGATGCCACAAAGTTCTTCGCAATGTCCAACCTTTCCCGTTCGGAACTCAAACAG
GTTTGGGCTATTGCAGATTCCAAACGACAAGGATTTCTTGGTTTCAGGGAGTTCATCACT
GCAATGCAGCTGGTTTCTCTGGCGCAAGCAGGAAATGAGATTACTTCGGACATCCTTAAA
ACTACAGGCAAGCAGAATAATATAACATTGTTTAATTTAGAACCTCCATCAATGGAAGGT
TTGAATGCCTTACTAGCTAAAAATAAGGTCTCAACAAATAATGGCGAGCTTGAATTAAAT
GGAGATTCTAGGCCACAGCCATCACCATCAGCTCCTTGGTTCACCTCAAAATCTGTAAAG
AAAGCACCTCTTAATTCCGTTACATCAATAATAGATGGCTTGAAGAGACTATACAATGAA
AAGTTAAAGCCATTGGAAGTCACCTACCGCTATAATGATTTTGTTTCTCCCTTATTGACA
CATAGTGACTTTGATGCCAAACCCATGGTTATGCTTTTGGGTCAGTATTCAACTGGGAAA
ACTACATTCATAAAACATTTACTCGGATGTAATTTCCCAGGAGCTCACATTGGACCAGAG
CCTACAACCGATCGTTTTGTTGTTGTCATGTCTGGACCTGATGAAAGGAGCATTCCTGGA
AATACCATTGCAGTTAATGCAGAGATGCCATTCAATGGACTGACAACTTTTGGAGGGGCA
TTTTTATCAAAATTTGAGTGTTCCCAGATACCACATTCTCTTCTAGAACACATCACCTTT
GTGGACACTCCAGGGGTCCTATCTGGAGAAAAGCAAAGAACACAAAGAAGCTATGATTTC
ACTGGTGTAATATCTTGGTTTGCAGCAAAATGTGATCTCATTCTTCTTCTTTTTGATCCC
CACAAACTTGATATCAGTGATGAATTTAAGCGTGTGATTGCATCTCTACGTGGTAATGAT
GACAAGATACGTGTAGTTTTGAACAAAGCTGATCAAGTCGATACACAACAACTAATGAGG
GTCTATGGTGCATTGATGTGGTCACTTGGGAAAGTTTTGAATACTCCCGAGGTTGTGCGA
GTTTATATTGGTTCATTCAATGACAAGCCTGTGAATGAAGCAGCCGTGGGTCCAATAGGG
AAGGATCTTTTTGAGAAAGAGCAGGATGATCTTCTTGCAGACTTGATAGATATTCCAAAA
AAAGCTTGTGATCGTCGGATCAATGAATTTGTAAAACGAGCTAGAGCTGCCAAGATTCAT
GCCTATATAATCAGTCACCTCAAAAAGGAGATGCCTGCAATGATGGGCAAAGCTAAAGCA
CAACAGCGACTAACCGATAATCTTGAAGATGAATTTGCAAAGATCCAAAGGGAGTTCCAT
CTTCCAGCTGGTGACTTCCCAAATGTGGAGCACTTTAGGGAGGTTCTGAACGGCTACAGC
ATCGATAAATTTGAGAAGCTGAAGCCTAAAATGATACAAGCTGTGGATGACATGCTTGGC
TATGATATTCCGGAGCTCCTGAAGAATTTCAGAAACCCCTATGAGTGAACA