Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0515g00020.t01
CDS Infomation

cds chromosome:12X:Un:31016731:31020673:-1 gene:VIT_00s0515g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGAAGAGCTGATTCTTTTCTTTTTAAGAAAATTAAGTGAGCAGCTGAATGAAGAA
GGAGAGTTACTGTCTGGAGTTCATGAAGACATTGAATGGATCAAGAACGAGCTACAAGCC
ATGGTGGCCTTCCTGAGGGATGTCCACAGGACGCAGCAAAGGGATAAAAGGGTTGGAAGA
TGGGCTGAGGAGGTAAGGAAGTTGGTTTATGATGCTGAAGATATCATCGATGAGTTTTTG
ATTCGAATGGAAAACCCGCGCTGGAATTTCATAAAACACCTTCAGACCAGGCATCAAGTC
GGCTCTCAAATTCAGAAGGTCAAAAAACGGGTTATGGAGGTCAAAGAAAGAAGGGACCGG
TACAATTGGTTGCATATTGCACAAGAAAATACACCAGGAATCATGCGTGCCTCATCCACA
GGCTTTGGTGCAGCTACCCCCTTTTTCCAGGTGGATGATATCGTTGGAATTGAGGTTCAT
GTTGAACAACTAGTCGAGTTGTTAATAGAGGGAAAATCAGATCGGCGTCAAGTGATATCA
GTGTTTGGTATGGGAGGTTTGGGCAAGACTACTCTTGCTAAGGAAGTCTACAAAAGAGTT
AAAACCGATTTTGATTGTTATTCTTGGGTGTTCTTATCACAATCCTGTAATTTAAGGGAT
GTCCTCCAAAGAATCCTGTTTGGACTCAAAGAAAGTAAAAACGAGCCAGCCATGGAGGTA
ATGGATGTCATGAATGAGGGGCTGTTGCAAGAGATGATCTACAACTACCTGCAGGACAAG
ATGTATTTGATTGTGTTTGATGATGTATGGGATACCGAAATTTGGGAAGAATTGAAACAT
GCGCTGCCTCGAGAAAGAGGTCAGATCATACTTACGACACGGATACAGGATATAGCTTCA
TCGGTTGAAGATGGTTGTTACATCTATCATCTCCATCCTCTAACTCATGAGTTAGCTTGG
AAACTTTTCTGTAAAAAGGCATTCCGGAGAATGAAAGCTTGTCCTGAAGATTTGAGGGGA
CTAGCAGAGTCTATTGTGAATAGGTGCGGAGGATTACCGCTTGCAATTGTGGCCATTGCA
GGGCTTTTGTCAAGCAAGGGTACGAATGCACGAGACTGGCAGCATGTTCTTGATACTCTT
GATTGGGAACTTAACCATGACCGTGACCTAGACCGGCTACATAAAACCCTGTTGTTAAGT
TACAATCACCTACCATTTTACCTTAAGTATTGTTTCCTGCATATCGGTTTGTTTCCTGCA
GACTATGAGATTGGGAGGAAAAGGCTGATCCGAATGTGGGTAGCTGAAGGCTTTGTTGAA
AAATCTAGGAGTAAAACAGATGAAGAAGTTGCAAATCATTATTTTTTGAAGCTTATACGT
GGGAGTATGATCCAACCTATTACCTTACCTGCCCGAGACGTGGTTAAAGCATGTAGAGTA
CATGACCAAATGCGAGATGTTGCAGCCTACATGCTTAAGCAAGAGATGTTTGGAGCCGCT
TTAGAAGCTGGAGACAAGGAAATGGAAGGAAGACCGCGTCGATTATCAATCTATGACAAT
GCTAAAAATCTCCCATCCAACATGGGTAACTTGAAACTCCGCTCTTTTCTCATGTTCAAG
ATAACCGAATTGTCATCCTCTAACTTACTGAAAATATTTGAGGAGCTTAAACTAGTAAGA
GTGTTGGACTTACAAGGAGTTCCAATAGAAAGATTGCCAGGTGAGGTGGGTAGCCTAATT
CATTTGAGGTATCTAAATTTGAGAGGCACATTTATCAAATGTCTCCCAAAGCAGCTTAAG
AGTTTGAGAAATCTTCAGACTTTGGATATCAGAAACACAAATCTGACAAGTTTGCCAACT
GGAATCAATAGGCTTCAGCAGCTGAGACATCTTCATATAGCAAGCTTCTGTGACAGAGAG
AAGGGTTTCTTGAAGATGCCCAAGGGAAAAAAGTGGCTTAAGAACCTTCAAACACTCTCT
GGTGTTGAACCTGATGAGGATCTATTGAAAGAGCTGAGAAGCTTAACCAACTTGAGGAAA
TTATACATTGGGGGGATGAATAAGACAAACAGTGAAGAATTGTGGGTTTCTCTGGGGGAG
ATGAAGAGCTTGCGCTCCTTTACAATGGTAGCGGATAGTTCACCTGAACGACCCCAAGTA
GAATCTCTTTCCAGGCCCCCACCATCTCTCGAGAAATTAAAACTGCAGGTGTCTATGACC
AGATTGCCAAAATGGTTTGTTTCTCTTAGATACCTCCATACTCTGTACTTGCTCAAGAAT
TTTCTTGTGGAAGACCCATTTCCCATTCTCCAACAACTTCCCAATCTTTTTGTCTTGATA
CTGGCGTCTTCAGCATTTTTGAGCACGGAAATATGTTGCAGATCAGGAGGGTTTCCTAAG
CTCACACTACTGCGAATCCTGGGAATGGAAAACTGGAGGAGATGGATGCCAATTGAGGAG
GGTACCATGCCAAACCTCAGGGTTTCAATCTTCTATTTTGCTTTGAGGCTAGATGTACCA
ACAGAAGGGAGTGGTAAGCACCCTTAA

Peptide Sequence

PEP ID

VIT_00s0515g00020.t01
PEP Infomation

pep chromosome:12X:Un:31016731:31020673:-1 gene:VIT_00s0515g00020 transcript:VIT_00s0515g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEELILFFLRKLSEQLNEEGELLSGVHEDIEWIKNELQAMVAFLRDVHRTQQRDKRVGR
WAEEVRKLVYDAEDIIDEFLIRMENPRWNFIKHLQTRHQVGSQIQKVKKRVMEVKERRDR
YNWLHIAQENTPGIMRASSTGFGAATPFFQVDDIVGIEVHVEQLVELLIEGKSDRRQVIS
VFGMGGLGKTTLAKEVYKRVKTDFDCYSWVFLSQSCNLRDVLQRILFGLKESKNEPAMEV
MDVMNEGLLQEMIYNYLQDKMYLIVFDDVWDTEIWEELKHALPRERGQIILTTRIQDIAS
SVEDGCYIYHLHPLTHELAWKLFCKKAFRRMKACPEDLRGLAESIVNRCGGLPLAIVAIA
GLLSSKGTNARDWQHVLDTLDWELNHDRDLDRLHKTLLLSYNHLPFYLKYCFLHIGLFPA
DYEIGRKRLIRMWVAEGFVEKSRSKTDEEVANHYFLKLIRGSMIQPITLPARDVVKACRV
HDQMRDVAAYMLKQEMFGAALEAGDKEMEGRPRRLSIYDNAKNLPSNMGNLKLRSFLMFK
ITELSSSNLLKIFEELKLVRVLDLQGVPIERLPGEVGSLIHLRYLNLRGTFIKCLPKQLK
SLRNLQTLDIRNTNLTSLPTGINRLQQLRHLHIASFCDREKGFLKMPKGKKWLKNLQTLS
GVEPDEDLLKELRSLTNLRKLYIGGMNKTNSEELWVSLGEMKSLRSFTMVADSSPERPQV
ESLSRPPPSLEKLKLQVSMTRLPKWFVSLRYLHTLYLLKNFLVEDPFPILQQLPNLFVLI
LASSAFLSTEICCRSGGFPKLTLLRILGMENWRRWMPIEEGTMPNLRVSIFYFALRLDVP
TEGSGKHP

Transcript Sequence

Transcript ID

VIT_00s0515g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:31016731:31020673:-1 gene:VIT_00s0515g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGAAGAGCTGATTCTTTTCTTTTTAAGAAAATTAAGTGAGCAGCTGAATGAAGAA
GGAGAGTTACTGTCTGGAGTTCATGAAGACATTGAATGGATCAAGAACGAGCTACAAGCC
ATGGTGGCCTTCCTGAGGGATGTCCACAGGACGCAGCAAAGGGATAAAAGGGTTGGAAGA
TGGGCTGAGGAGGTAAGGAAGTTGGTTTATGATGCTGAAGATATCATCGATGAGTTTTTG
ATTCGAATGGAAAACCCGCGCTGGAATTTCATAAAACACCTTCAGACCAGGCATCAAGTC
GGCTCTCAAATTCAGAAGGTCAAAAAACGGGTTATGGAGGTCAAAGAAAGAAGGGACCGG
TACAATTGGTTGCATATTGCACAAGAAAATACACCAGGAATCATGCGTGCCTCATCCACA
GGCTTTGGTGCAGCTACCCCCTTTTTCCAGGTGGATGATATCGTTGGAATTGAGGTTCAT
GTTGAACAACTAGTCGAGTTGTTAATAGAGGGAAAATCAGATCGGCGTCAAGTGATATCA
GTGTTTGGTATGGGAGGTTTGGGCAAGACTACTCTTGCTAAGGAAGTCTACAAAAGAGTT
AAAACCGATTTTGATTGTTATTCTTGGGTGTTCTTATCACAATCCTGTAATTTAAGGGAT
GTCCTCCAAAGAATCCTGTTTGGACTCAAAGAAAGTAAAAACGAGCCAGCCATGGAGGTA
ATGGATGTCATGAATGAGGGGCTGTTGCAAGAGATGATCTACAACTACCTGCAGGACAAG
ATGTATTTGATTGTGTTTGATGATGTATGGGATACCGAAATTTGGGAAGAATTGAAACAT
GCGCTGCCTCGAGAAAGAGGTCAGATCATACTTACGACACGGATACAGGATATAGCTTCA
TCGGTTGAAGATGGTTGTTACATCTATCATCTCCATCCTCTAACTCATGAGTTAGCTTGG
AAACTTTTCTGTAAAAAGGCATTCCGGAGAATGAAAGCTTGTCCTGAAGATTTGAGGGGA
CTAGCAGAGTCTATTGTGAATAGGTGCGGAGGATTACCGCTTGCAATTGTGGCCATTGCA
GGGCTTTTGTCAAGCAAGGGTACGAATGCACGAGACTGGCAGCATGTTCTTGATACTCTT
GATTGGGAACTTAACCATGACCGTGACCTAGACCGGCTACATAAAACCCTGTTGTTAAGT
TACAATCACCTACCATTTTACCTTAAGTATTGTTTCCTGCATATCGGTTTGTTTCCTGCA
GACTATGAGATTGGGAGGAAAAGGCTGATCCGAATGTGGGTAGCTGAAGGCTTTGTTGAA
AAATCTAGGAGTAAAACAGATGAAGAAGTTGCAAATCATTATTTTTTGAAGCTTATACGT
GGGAGTATGATCCAACCTATTACCTTACCTGCCCGAGACGTGGTTAAAGCATGTAGAGTA
CATGACCAAATGCGAGATGTTGCAGCCTACATGCTTAAGCAAGAGATGTTTGGAGCCGCT
TTAGAAGCTGGAGACAAGGAAATGGAAGGAAGACCGCGTCGATTATCAATCTATGACAAT
GCTAAAAATCTCCCATCCAACATGGGTAACTTGAAACTCCGCTCTTTTCTCATGTTCAAG
ATAACCGAATTGTCATCCTCTAACTTACTGAAAATATTTGAGGAGCTTAAACTAGTAAGA
GTGTTGGACTTACAAGGAGTTCCAATAGAAAGATTGCCAGGTGAGGTGGGTAGCCTAATT
CATTTGAGGTATCTAAATTTGAGAGGCACATTTATCAAATGTCTCCCAAAGCAGCTTAAG
AGTTTGAGAAATCTTCAGACTTTGGATATCAGAAACACAAATCTGACAAGTTTGCCAACT
GGAATCAATAGGCTTCAGCAGCTGAGACATCTTCATATAGCAAGCTTCTGTGACAGAGAG
AAGGGTTTCTTGAAGATGCCCAAGGGAAAAAAGTGGCTTAAGAACCTTCAAACACTCTCT
GGTGTTGAACCTGATGAGGATCTATTGAAAGAGCTGAGAAGCTTAACCAACTTGAGGAAA
TTATACATTGGGGGGATGAATAAGACAAACAGTGAAGAATTGTGGGTTTCTCTGGGGGAG
ATGAAGAGCTTGCGCTCCTTTACAATGGTAGCGGATAGTTCACCTGAACGACCCCAAGTA
GAATCTCTTTCCAGGCCCCCACCATCTCTCGAGAAATTAAAACTGCAGGTGTCTATGACC
AGATTGCCAAAATGGTTTGTTTCTCTTAGATACCTCCATACTCTGTACTTGCTCAAGAAT
TTTCTTGTGGAAGACCCATTTCCCATTCTCCAACAACTTCCCAATCTTTTTGTCTTGATA
CTGGCGTCTTCAGCATTTTTGAGCACGGAAATATGTTGCAGATCAGGAGGGTTTCCTAAG
CTCACACTACTGCGAATCCTGGGAATGGAAAACTGGAGGAGATGGATGCCAATTGAGGAG
GGTACCATGCCAAACCTCAGGGTTTCAATCTTCTATTTTGCTTTGAGGCTAGATGTACCA
ACAGAAGGGAGTGGTAAGCACCCTTAA