Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0515g00010.t01
CDS Infomation

cds chromosome:12X:Un:31005245:31015399:1 gene:VIT_00s0515g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCGAAGCTTTGTTCTATGGCTTCATGGGTTGGATGACTCTGGCCCTGCCAATGAA
CATATCAAGGCCCTCTTCACTTCATCTGAGTTCAGAAACACTGTCTGGTCCTTCCCTTCT
GCTCCTCCCATCCCAGTCACCTGCAATAATGGTGCCATCACACCTTCATGGTTTGACATT
CATGAGATACCTGTGACAACTGATTCTACTAAAGATGAAAATGGCGTGCTTAAAGCAGTT
AAGCATGTGCATGCAATGTTAGACAAGGAGCTTGCTGCAGGCACAAATGCTAATAATGTA
TTTGTATGTGGAGAGAGTCAAGGAGGTGCTTTGACCTTAGCAAGTGTTTTGCTATACCCA
AGAACTCTAGGAGGAGGTGCAATCTTTAGTGGATGGGTTCCTTTTAATTCGTCTATAATA
GAACAAATCCCACCAGGGTCAAAGAAGACACCCATTCTGTGGTTGCATGGTATGGCTGAC
AGAACAGTATTGTTTGAAACTGGACAAGCAGGTCAGCATTTCCTTGAACAAGCTGGCGTA
AGTTGTGAGTTTAAGTCTTATCCTGGTCTCGGCCATTCAATAAGCAATGAGGAGTTGCAA
GACCTAGAGTCATGGATCATCACTCATCTTCAGAGGTCTTTGTACCACCATGGAAGAACA
GCGATGGACCTTATAACAGTGTCAACAAAACCAATTGCTCTCCTTACAATCACCTTAGGT
AGCACCATTTTCTTCATACTTATCCTCCGGCCGCATACATTTTCTCCAAAGCCAGACTCC
ATGGCTCGAAGCTTTGTTTTGTGGCTTCATGGGTTGGGTGACTCAGGCCCTGCCAATGAA
CCCATCAAGACCCTCTTCACTTCTCCTGAGTTCAGAAACACCATATGGAAATTCCCTTCT
GCTCCTTCAAACCCAGTCACCTGCAATTATGGTTCTGTCATGCCTTCCTGGTTTGACATT
CATGAGATACCTGTGACAGCTGATTCTCCAAAAGATGAAAATGGTGTACTTAAAGCAGTT
CAGAATGTGCATGCAATGATAGATAAGGAGCTAGCTGCAGGCACAAATCCTAAAAACATA
TTTGTATGTGGATTCAGTCAAGGAGGTGCCTTGACCTTGGCAAGTGTTTTGCTATACCCA
AGAACTCTAGGAGGAGGTGCTGTCTTCAGTGGATGGGTTCCTTTTAATTCAACCATGATA
GAACGAATGCCAGCAGATGCCAAGAAGACACCTATTTTGTGGTCACATGGTATGGCTGAC
AGAACAGTATTGTTTGAAGCTGGACAAGCAGGTCCTCCTTTCCTTGAACAAGCTGGTGTA
AGTTGTGAGTTTAAGGCTTATCCTGGTCTGGCTCATTCCATAAGCAATGAGGAATTGCGG
TACCTAGAATCATGGATCAAAACTCGACTTCAGAGTTCTTCGTAG

Peptide Sequence

PEP ID

VIT_00s0515g00010.t01
PEP Infomation

pep chromosome:12X:Un:31005245:31015399:1 gene:VIT_00s0515g00010 transcript:VIT_00s0515g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MARSFVLWLHGLDDSGPANEHIKALFTSSEFRNTVWSFPSAPPIPVTCNNGAITPSWFDI
HEIPVTTDSTKDENGVLKAVKHVHAMLDKELAAGTNANNVFVCGESQGGALTLASVLLYP
RTLGGGAIFSGWVPFNSSIIEQIPPGSKKTPILWLHGMADRTVLFETGQAGQHFLEQAGV
SCEFKSYPGLGHSISNEELQDLESWIITHLQRSLYHHGRTAMDLITVSTKPIALLTITLG
STIFFILILRPHTFSPKPDSMARSFVLWLHGLGDSGPANEPIKTLFTSPEFRNTIWKFPS
APSNPVTCNYGSVMPSWFDIHEIPVTADSPKDENGVLKAVQNVHAMIDKELAAGTNPKNI
FVCGFSQGGALTLASVLLYPRTLGGGAVFSGWVPFNSTMIERMPADAKKTPILWSHGMAD
RTVLFEAGQAGPPFLEQAGVSCEFKAYPGLAHSISNEELRYLESWIKTRLQSSS

Transcript Sequence

Transcript ID

VIT_00s0515g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:31005245:31015399:1 gene:VIT_00s0515g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCATGGCTCGAAGCTTTGTTCTATGGCTTCATGGGTTGGATGACTCTGGCCCTGCCAAT
GAACATATCAAGGCCCTCTTCACTTCATCTGAGTTCAGAAACACTGTCTGGTCCTTCCCT
TCTGCTCCTCCCATCCCAGTCACCTGCAATAATGGTGCCATCACACCTTCATGGTTTGAC
ATTCATGAGATACCTGTGACAACTGATTCTACTAAAGATGAAAATGGCGTGCTTAAAGCA
GTTAAGCATGTGCATGCAATGTTAGACAAGGAGCTTGCTGCAGGCACAAATGCTAATAAT
GTATTTGTATGTGGAGAGAGTCAAGGAGGTGCTTTGACCTTAGCAAGTGTTTTGCTATAC
CCAAGAACTCTAGGAGGAGGTGCAATCTTTAGTGGATGGGTTCCTTTTAATTCGTCTATA
ATAGAACAAATCCCACCAGGGTCAAAGAAGACACCCATTCTGTGGTTGCATGGTATGGCT
GACAGAACAGTATTGTTTGAAACTGGACAAGCAGGTCAGCATTTCCTTGAACAAGCTGGC
GTAAGTTGTGAGTTTAAGTCTTATCCTGGTCTCGGCCATTCAATAAGCAATGAGGAGTTG
CAAGACCTAGAGTCATGGATCATCACTCATCTTCAGAGGTCTTTGTACCACCATGGAAGA
ACAGCGATGGACCTTATAACAGTGTCAACAAAACCAATTGCTCTCCTTACAATCACCTTA
GGTAGCACCATTTTCTTCATACTTATCCTCCGGCCGCATACATTTTCTCCAAAGCCAGAC
TCCATGGCTCGAAGCTTTGTTTTGTGGCTTCATGGGTTGGGTGACTCAGGCCCTGCCAAT
GAACCCATCAAGACCCTCTTCACTTCTCCTGAGTTCAGAAACACCATATGGAAATTCCCT
TCTGCTCCTTCAAACCCAGTCACCTGCAATTATGGTTCTGTCATGCCTTCCTGGTTTGAC
ATTCATGAGATACCTGTGACAGCTGATTCTCCAAAAGATGAAAATGGTGTACTTAAAGCA
GTTCAGAATGTGCATGCAATGATAGATAAGGAGCTAGCTGCAGGCACAAATCCTAAAAAC
ATATTTGTATGTGGATTCAGTCAAGGAGGTGCCTTGACCTTGGCAAGTGTTTTGCTATAC
CCAAGAACTCTAGGAGGAGGTGCTGTCTTCAGTGGATGGGTTCCTTTTAATTCAACCATG
ATAGAACGAATGCCAGCAGATGCCAAGAAGACACCTATTTTGTGGTCACATGGTATGGCT
GACAGAACAGTATTGTTTGAAGCTGGACAAGCAGGTCCTCCTTTCCTTGAACAAGCTGGT
GTAAGTTGTGAGTTTAAGGCTTATCCTGGTCTGGCTCATTCCATAAGCAATGAGGAATTG
CGGTACCTAGAATCATGGATCAAAACTCGACTTCAGAGTTCTTCGTAGAGGTTTGTCTAG
AATGACATTGCTGTCTACTGTTATCAAAGCTCCTTGCGCTTGAGCTGTTATTGGATGATT
AATATGGATGAGACTTGATATATCACATATTCTTATGGTATACATAACTCTGGAAGGAGG
GAGGCCTTTCTTTTAGCTTTTTCAACTTTTGCCCAGTTGTAATTTAGCTTTATCATGAAC
TTTCTGCAAACACACAATTATACTTTTGCTCATGCAGGAAGCAAATACTTTTTCCCCCAA
CAATCTTTGTGCTTTGGCTAATGTAAGAAGCACCCTTTTTATTCTATTGCTCTGGGTC