Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0508g00020.t01
CDS Infomation

cds chromosome:12X:Un:30906442:30911769:1 gene:VIT_00s0508g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGGAGAAGTTCTCGGCAACACTCCGGATTGGAGATCTGAATGATTTCATAGCGCCG
TCACAAGGTTGCGTTGTTTCTCTCAAGGGGCTCAAGGCCGCCCCTGCCAAGCCTGAGAAA
GCTGAGGTTGTGACGGGTACCAAATCAGCAAACACTGAACCTGTTAAGATTTCGCTTAAG
GATTGCTTAGCATGCAGTGGATGCATAACATCAGCTGAGACTGTGATGCTTGAGAAGCAA
AGTATGGATGAGTTTCTCTTTAATATTAACAAAGGGAAGGCAGTCATTGTCTCCCTTTCT
CCCCAGTCAAGGGCTTCCTTTGCTATTCATTTTGGCCTCTCTCCACTCCAGGTTTTGAGG
AAGCTCACAACATTTTTTAAGTCCTTGGGGGTCAAAGCTGTATTTGATACAAGCTGCAGT
AGAGACTTGTCGCTTATTGAATCTTGTAATGCGTTCATCTCACGATATAAACAACACCAT
TCTACTGAGGATGAAAAATGCAAAACATCCTTACCCATGCTATCATCTGCTTGTCCAGGT
TGGATATGCTATGCTGAAAAGACACTTGGATCCTATATTCTGCCTTATATTTCATCAGTG
AAGAGCCCCCAGCAAACTATTGGAGTTACAATTAAGAACTATCTTTGTCAAAAAATGGGT
TTCAGGCCAGACGAGGTTTACCATGTATCTGTGATGCCCTGTTATGATAAGAAGCTTGAG
GCTGCAAGGGATGACTTTGTGTTTGAAGTGGATTCTCCAGGTGGAGTCCATGAAAATACA
GGGCTAAGGATTACTGAGGTAGATTCAGTGCTGACATCTGGAGAAGTTTTAGAATTAATA
CAGTTAAAATCAGTGGATTTCAAAAACTTGGAAGAGTCTCCTCTAGATAGATTGCTAACA
AATGTCAATGAAGAAGGTCATCTCTATGGGGTCCAGGGAAGCTCTGGAGGTTATGCAGAC
ACAATTTTCCGATATGCTGCCAAAACACTGTTTGGGAGAGAACTTAAAGGCCCTCTGGAT
TTCAAAACTGTACGGAATTCAGATTTCCGGGAAGTGACTCTGGAAATAGAGGGGCAAACC
ATGTTGAAATTTGCATTATGCTATGGCTTCCGCAACCTGCAGAATATTGTGAGAAAAATC
AAGATTGGAAAATGTGATTACCACTTTCTGGAGGTCATGGCATGCCCTTCAGGGTGCTTG
AATGGTGGTGGTCAAATAAAGCCAAAGGCAGGGCAATCAGCCAAGGATCTGATCCAATCA
TTAGAAGCCATCTATATGGAAAATGTTGTGGTTGCTGATCCTTTCAAGAATCCCATTGTA
AAAGGTTTGTATGATGAATGGCTTGAGCAACCAGGCTCAGAGAAAGCTAAGAGATTGATC
CACACAGAATATCACCCGGTGGTAAAAAGCATCACTTCTCAATTACACAACTGGTGA

Peptide Sequence

PEP ID

VIT_00s0508g00020.t01
PEP Infomation

pep chromosome:12X:Un:30906442:30911769:1 gene:VIT_00s0508g00020 transcript:VIT_00s0508g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSEKFSATLRIGDLNDFIAPSQGCVVSLKGLKAAPAKPEKAEVVTGTKSANTEPVKISLK
DCLACSGCITSAETVMLEKQSMDEFLFNINKGKAVIVSLSPQSRASFAIHFGLSPLQVLR
KLTTFFKSLGVKAVFDTSCSRDLSLIESCNAFISRYKQHHSTEDEKCKTSLPMLSSACPG
WICYAEKTLGSYILPYISSVKSPQQTIGVTIKNYLCQKMGFRPDEVYHVSVMPCYDKKLE
AARDDFVFEVDSPGGVHENTGLRITEVDSVLTSGEVLELIQLKSVDFKNLEESPLDRLLT
NVNEEGHLYGVQGSSGGYADTIFRYAAKTLFGRELKGPLDFKTVRNSDFREVTLEIEGQT
MLKFALCYGFRNLQNIVRKIKIGKCDYHFLEVMACPSGCLNGGGQIKPKAGQSAKDLIQS
LEAIYMENVVVADPFKNPIVKGLYDEWLEQPGSEKAKRLIHTEYHPVVKSITSQLHNW

Transcript Sequence

Transcript ID

VIT_00s0508g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:30906442:30911769:1 gene:VIT_00s0508g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGAGATGTCGGAGAAGTTCTCGGCAACACTCCGGATTGGAGATCTGAATGATTTCATA
GCGCCGTCACAAGGTTGCGTTGTTTCTCTCAAGGGGCTCAAGGCCGCCCCTGCCAAGCCT
GAGAAAGCTGAGGTTGTGACGGGTACCAAATCAGCAAACACTGAACCTGTTAAGATTTCG
CTTAAGGATTGCTTAGCATGCAGTGGATGCATAACATCAGCTGAGACTGTGATGCTTGAG
AAGCAAAGTATGGATGAGTTTCTCTTTAATATTAACAAAGGGAAGGCAGTCATTGTCTCC
CTTTCTCCCCAGTCAAGGGCTTCCTTTGCTATTCATTTTGGCCTCTCTCCACTCCAGGTT
TTGAGGAAGCTCACAACATTTTTTAAGTCCTTGGGGGTCAAAGCTGTATTTGATACAAGC
TGCAGTAGAGACTTGTCGCTTATTGAATCTTGTAATGCGTTCATCTCACGATATAAACAA
CACCATTCTACTGAGGATGAAAAATGCAAAACATCCTTACCCATGCTATCATCTGCTTGT
CCAGGTTGGATATGCTATGCTGAAAAGACACTTGGATCCTATATTCTGCCTTATATTTCA
TCAGTGAAGAGCCCCCAGCAAACTATTGGAGTTACAATTAAGAACTATCTTTGTCAAAAA
ATGGGTTTCAGGCCAGACGAGGTTTACCATGTATCTGTGATGCCCTGTTATGATAAGAAG
CTTGAGGCTGCAAGGGATGACTTTGTGTTTGAAGTGGATTCTCCAGGTGGAGTCCATGAA
AATACAGGGCTAAGGATTACTGAGGTAGATTCAGTGCTGACATCTGGAGAAGTTTTAGAA
TTAATACAGTTAAAATCAGTGGATTTCAAAAACTTGGAAGAGTCTCCTCTAGATAGATTG
CTAACAAATGTCAATGAAGAAGGTCATCTCTATGGGGTCCAGGGAAGCTCTGGAGGTTAT
GCAGACACAATTTTCCGATATGCTGCCAAAACACTGTTTGGGAGAGAACTTAAAGGCCCT
CTGGATTTCAAAACTGTACGGAATTCAGATTTCCGGGAAGTGACTCTGGAAATAGAGGGG
CAAACCATGTTGAAATTTGCATTATGCTATGGCTTCCGCAACCTGCAGAATATTGTGAGA
AAAATCAAGATTGGAAAATGTGATTACCACTTTCTGGAGGTCATGGCATGCCCTTCAGGG
TGCTTGAATGGTGGTGGTCAAATAAAGCCAAAGGCAGGGCAATCAGCCAAGGATCTGATC
CAATCATTAGAAGCCATCTATATGGAAAATGTTGTGGTTGCTGATCCTTTCAAGAATCCC
ATTGTAAAAGGTTTGTATGATGAATGGCTTGAGCAACCAGGCTCAGAGAAAGCTAAGAGA
TTGATCCACACAGAATATCACCCGGTGGTAAAAAGCATCACTTCTCAATTACACAACTGG
TGAGAAATTCTTTGGCTACGATACTGCCCAACGGTGGAACTTTCCTCTTCCCCGATTCGT
CTCTTCCCTGACCCATGTTGCTGAAATGGTATTACTGGTCGCTAGCACAATGCCTCATCC
GTCGAAATGCCAATCATCGACATGGGTGCACGCGTGGAGTCGTCCAATTTTGAATATAGG
TAGAGAAAAAGGGTGCGCCCATGCTTTCACATTTCTAGTCATGTATATATTGTGTCTGAG
CTCTCCATTATTTGACCGCATGAAAACGAATATATTCATGTAAGCTTTGTGGTCTTTTTT
GTTTTTTTGTTTTTTTTTATTTAAATTCTATTGATTCTTGAATAGGCTCGTTGGCAGATA
TATAGTCTGTTATTCAAACAAAAATTACAGCC