Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0480g00010.t01
CDS Infomation

cds chromosome:12X:Un:30157322:30161001:1 gene:VIT_00s0480g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTGGGTCATGCTTGCCATTGCTCTTTCGCAGAAAGACAATGACCTTCGAGGCA
ACCAAAGTCTCTAACATATCCAAAAATCAAAAGCCAGCACAGAGCTTGAAGACAGAGATG
TCATATGGAAAAACCGGCAACTTCATTTTGATCATGGAGCTCCGGAAGAAGATCATGACC
TTCCGAGACCTCATTGACCTACCTCCATGTGATGGCTCTGCTTCCATTGATGAGCTTGTG
ATATGGACAACCGAGGAGCTTCATAAGATGTACCCTGAAGTTGTACCTGGTATTCCAGTC
TCGGCAACCATGGGAATAGCATCCATGGATCAGGGGCTTGTCTACCTTTGCAGGGCTTTG
AAATCTGTTGGAGACTTGTGGATGAAGAACACAGAGTGGATGGGCAATATCAAATATGAT
GCTCATGGAAATTTAGAGCAACTGGGTATGTCAATTCTTTCTCCAGGATCTGGGTTAGCA
CTACTTGATTGCATGATTAAGGTTGCAAAAGACAAATTTGATATGATGGAAGAGGAAGAT
GCGGGGAAAGATAATAGTCCAGGACCAGAGACAAGTACCTTTATGAGATCGTATTCGTTC
AATAAAACTGCCTCTCCATGCCTTTCTCCAGTTACTCCAACTTCAGTCCTTCCAGAGCTT
ACCAACTATCCTTCCAAAGTTGGAGACTTTGCATATGCTTCTTCTTCCCCACCCTTTCTC
TGGCCTCTGAGAATGCAAGCTGTGGGGAAATTGAATCCCATTGATGTAAAACACCTCTCT
TTTCACATGTTCCCTCGTGTGATACCCCAAGATTCCACCTCTAATTTTACCCAAAAGAAG
AGCACAGTTAAGGAACCAGAGCAAGAGATGGAAGCAAAGAGCGATTCTGAAATGACAGTA
GCAGGTGCCTTTGAGGAAGCAAAAGATGACAAAAGTATTGAGGAAACACCAGATGTTGTG
GTGGCTGATTTGAACGATATGAGCAGCAACGAAGGGGGAGATAACAAAATCAGTGAAGCT
GAAAACCTGAGTATATCCCCAATGCCGTCTTCTGCGTCGTTTGAAAGAGAAGACAGGGAG
GTGTTCGGACCACCACCAGCTCCACCATCACCACCAGCACCACCCCAGCTCTCTTTAAAT
GCAGAAAGAGTGTCACTACCACCACCCATGTTGCAGCCAAAAATAGCAGCACCTCCGCCG
CAGCCACCACCACCACCACCACAACCACTACCTTTGGTGACTTCAAGAGTATCAGTGCCA
CCACCCCCACTACCACCAATGCCACTTACTAATGAAGTTGCTCCACCTTCACTGCCACCT
TTGATGCCTTCAAAAGGATCAGTGCCATCACCACCAGCACCACCAATTCCACTTACAACT
GGGGCTGCTCCACCACCACCACCACCTCCACCTATGCCTCTTTCAAATGGAGCTGCTCCG
CCATCACCGCCACCCATGCCTCTTTCAAGTGGAGCTGCTCCCCCGCCACCACCTTTCATG
CCTTTAAAAGGAACAGGGCCATTACCACCCCCACCACCCATGCTACTTACAAAAGGAGGT
GCTCCTCCACCTCCTCCGCCAGGTGGGGCCAAAAACCTACGTCCTAGGAAAGCAGCTACT
AAATTAAAGAGATCAACTCAAATGGGTAATTTATATCGGGTTCTCAAGGGTAAGGTGGAA
GGATCAAGCCTACAAGGTCAATCATCAAATGGGAGAAAAGGCCTGGCTGGGAGCTCAGCT
GGTGGAAAACAGGGAATGGCTGATGCACTAGCAGAGATGACAAAGAGGTCTGCCTACTTC
CAACAAATTGAAGAAGATGTTCAAAAACACGCAAAATCAATCATGGAGCTGAAAGCTGCA
ATTGGTTCTTTCCAAACAAAGGACATGAATGAGATGCTTAAGTTCCACAAACATGTGGAA
TCCTGTCTTGAGGAGCTCACTGATGAAAGCCAGGTGCTAGCAAGGTTTGAAGGTTTCCCC
ACAAAGAAGCTAGAAGCATTAAGGATGGCAGCAGCATTATACTTGAAACTAGATGCAATA
GTTGCTAACCTGCAAAATTGGAAGCCAGTGGCTCCCTTGGGCCAACTCCTTGACAAGGCT
GAGCATTACTTCAGTAAGATCAAAGGAGAGATCGATGCACTGGAACGAACCAAAGATGAA
GAATCCAAGAAATTTCAAAGTCATAACATCCATTTTGACTTCGGTATCCTTGTCCGTATT
AAGGAATCAGCAGTCGATGTTTCCTCAAGTTGCATGGAGTTTGCACTTAAGGAGAGGAGA
GAAGCAAAGGCGATGGAGAACCAAGGCAGTTCTGGGTCGAAAACCGAAGGACCAACAAAG
GGATGTGGCAAAATGCTTTGGAGGGCTTTTCAGTTTGCATTCCGGGTGTACACCTTTGCT
GGTGGACATGATGATCGTGCAGAGGAGCTAACTAGAGAATTGGCTCAAGAAATAGAATCT
GATCCTCGGCATGTATGA

Peptide Sequence

PEP ID

VIT_00s0480g00010.t01
PEP Infomation

pep chromosome:12X:Un:30157322:30161001:1 gene:VIT_00s0480g00010 transcript:VIT_00s0480g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASGSCLPLLFRRKTMTFEATKVSNISKNQKPAQSLKTEMSYGKTGNFILIMELRKKIMT
FRDLIDLPPCDGSASIDELVIWTTEELHKMYPEVVPGIPVSATMGIASMDQGLVYLCRAL
KSVGDLWMKNTEWMGNIKYDAHGNLEQLGMSILSPGSGLALLDCMIKVAKDKFDMMEEED
AGKDNSPGPETSTFMRSYSFNKTASPCLSPVTPTSVLPELTNYPSKVGDFAYASSSPPFL
WPLRMQAVGKLNPIDVKHLSFHMFPRVIPQDSTSNFTQKKSTVKEPEQEMEAKSDSEMTV
AGAFEEAKDDKSIEETPDVVVADLNDMSSNEGGDNKISEAENLSISPMPSSASFEREDRE
VFGPPPAPPSPPAPPQLSLNAERVSLPPPMLQPKIAAPPPQPPPPPPQPLPLVTSRVSVP
PPPLPPMPLTNEVAPPSLPPLMPSKGSVPSPPAPPIPLTTGAAPPPPPPPPMPLSNGAAP
PSPPPMPLSSGAAPPPPPFMPLKGTGPLPPPPPMLLTKGGAPPPPPPGGAKNLRPRKAAT
KLKRSTQMGNLYRVLKGKVEGSSLQGQSSNGRKGLAGSSAGGKQGMADALAEMTKRSAYF
QQIEEDVQKHAKSIMELKAAIGSFQTKDMNEMLKFHKHVESCLEELTDESQVLARFEGFP
TKKLEALRMAAALYLKLDAIVANLQNWKPVAPLGQLLDKAEHYFSKIKGEIDALERTKDE
ESKKFQSHNIHFDFGILVRIKESAVDVSSSCMEFALKERREAKAMENQGSSGSKTEGPTK
GCGKMLWRAFQFAFRVYTFAGGHDDRAEELTRELAQEIESDPRHV

Transcript Sequence

Transcript ID

VIT_00s0480g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:30157322:30161001:1 gene:VIT_00s0480g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTGGGTCATGCTTGCCATTGCTCTTTCGCAGAAAGACAATGACCTTCGAGGCA
ACCAAAGTCTCTAACATATCCAAAAATCAAAAGCCAGCACAGAGCTTGAAGACAGAGATG
TCATATGGAAAAACCGGCAACTTCATTTTGATCATGGAGCTCCGGAAGAAGATCATGACC
TTCCGAGACCTCATTGACCTACCTCCATGTGATGGCTCTGCTTCCATTGATGAGCTTGTG
ATATGGACAACCGAGGAGCTTCATAAGATGTACCCTGAAGTTGTACCTGGTATTCCAGTC
TCGGCAACCATGGGAATAGCATCCATGGATCAGGGGCTTGTCTACCTTTGCAGGGCTTTG
AAATCTGTTGGAGACTTGTGGATGAAGAACACAGAGTGGATGGGCAATATCAAATATGAT
GCTCATGGAAATTTAGAGCAACTGGGTATGTCAATTCTTTCTCCAGGATCTGGGTTAGCA
CTACTTGATTGCATGATTAAGGTTGCAAAAGACAAATTTGATATGATGGAAGAGGAAGAT
GCGGGGAAAGATAATAGTCCAGGACCAGAGACAAGTACCTTTATGAGATCGTATTCGTTC
AATAAAACTGCCTCTCCATGCCTTTCTCCAGTTACTCCAACTTCAGTCCTTCCAGAGCTT
ACCAACTATCCTTCCAAAGTTGGAGACTTTGCATATGCTTCTTCTTCCCCACCCTTTCTC
TGGCCTCTGAGAATGCAAGCTGTGGGGAAATTGAATCCCATTGATGTAAAACACCTCTCT
TTTCACATGTTCCCTCGTGTGATACCCCAAGATTCCACCTCTAATTTTACCCAAAAGAAG
AGCACAGTTAAGGAACCAGAGCAAGAGATGGAAGCAAAGAGCGATTCTGAAATGACAGTA
GCAGGTGCCTTTGAGGAAGCAAAAGATGACAAAAGTATTGAGGAAACACCAGATGTTGTG
GTGGCTGATTTGAACGATATGAGCAGCAACGAAGGGGGAGATAACAAAATCAGTGAAGCT
GAAAACCTGAGTATATCCCCAATGCCGTCTTCTGCGTCGTTTGAAAGAGAAGACAGGGAG
GTGTTCGGACCACCACCAGCTCCACCATCACCACCAGCACCACCCCAGCTCTCTTTAAAT
GCAGAAAGAGTGTCACTACCACCACCCATGTTGCAGCCAAAAATAGCAGCACCTCCGCCG
CAGCCACCACCACCACCACCACAACCACTACCTTTGGTGACTTCAAGAGTATCAGTGCCA
CCACCCCCACTACCACCAATGCCACTTACTAATGAAGTTGCTCCACCTTCACTGCCACCT
TTGATGCCTTCAAAAGGATCAGTGCCATCACCACCAGCACCACCAATTCCACTTACAACT
GGGGCTGCTCCACCACCACCACCACCTCCACCTATGCCTCTTTCAAATGGAGCTGCTCCG
CCATCACCGCCACCCATGCCTCTTTCAAGTGGAGCTGCTCCCCCGCCACCACCTTTCATG
CCTTTAAAAGGAACAGGGCCATTACCACCCCCACCACCCATGCTACTTACAAAAGGAGGT
GCTCCTCCACCTCCTCCGCCAGGTGGGGCCAAAAACCTACGTCCTAGGAAAGCAGCTACT
AAATTAAAGAGATCAACTCAAATGGGTAATTTATATCGGGTTCTCAAGGGTAAGGTGGAA
GGATCAAGCCTACAAGGTCAATCATCAAATGGGAGAAAAGGCCTGGCTGGGAGCTCAGCT
GGTGGAAAACAGGGAATGGCTGATGCACTAGCAGAGATGACAAAGAGGTCTGCCTACTTC
CAACAAATTGAAGAAGATGTTCAAAAACACGCAAAATCAATCATGGAGCTGAAAGCTGCA
ATTGGTTCTTTCCAAACAAAGGACATGAATGAGATGCTTAAGTTCCACAAACATGTGGAA
TCCTGTCTTGAGGAGCTCACTGATGAAAGCCAGGTGCTAGCAAGGTTTGAAGGTTTCCCC
ACAAAGAAGCTAGAAGCATTAAGGATGGCAGCAGCATTATACTTGAAACTAGATGCAATA
GTTGCTAACCTGCAAAATTGGAAGCCAGTGGCTCCCTTGGGCCAACTCCTTGACAAGGCT
GAGCATTACTTCAGTAAGATCAAAGGAGAGATCGATGCACTGGAACGAACCAAAGATGAA
GAATCCAAGAAATTTCAAAGTCATAACATCCATTTTGACTTCGGTATCCTTGTCCGTATT
AAGGAATCAGCAGTCGATGTTTCCTCAAGTTGCATGGAGTTTGCACTTAAGGAGAGGAGA
GAAGCAAAGGCGATGGAGAACCAAGGCAGTTCTGGGTCGAAAACCGAAGGACCAACAAAG
GGATGTGGCAAAATGCTTTGGAGGGCTTTTCAGTTTGCATTCCGGGTGTACACCTTTGCT
GGTGGACATGATGATCGTGCAGAGGAGCTAACTAGAGAATTGGCTCAAGAAATAGAATCT
GATCCTCGGCATGTATGA