Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0477g00040.t01
CDS Infomation

cds chromosome:12X:Un:30043240:30044569:-1 gene:VIT_00s0477g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGCGAAGCACAAAACTGAGGGACCTGATAGGAGCCATCAAGGACAAGGCTTCGCTG
AGCAAAGCAGCTCTTCTCTCCAAGCCCAACACGCTCTCTCTCCACCTATCCCTCCTCCGG
GCCACCACTCACGAGCCCTCTATTCCTCCCCATGACAAGCATATCGCCGCCCTCCTCTCC
TTCGGAAACAGCTCACGCGCCACGGCCTCCGCCGTCATCGAAGCCCTCATGGACCGCCTC
CAGAACACCCACGACGCCTCCGTCGCCATCAAGTGCCTCATCGCCGTCCACCACATCATC
AGACGCGGCAGCTTTATCCTCCAAGACCAGCTCTCCATCTACCCCTCCACCGGCGGCCGA
AACTACCTCAAACTCTCCGGCTTCCGCGACTCCTCTGATCCGATCACGTGGGAGCTCTCT
TCTTGGGTCAGATGGTACTCTTGCTATCTCGAACACGTCCTCTCAACTTCTCGAGTCTTG
GGTTTCTTCCTCTGCTCTTCCTTGTCCACCGTGAACAAAGACGAAGAAGTAGATCAAGTT
TCAGCTCTCACGAACCAACAGCTGATCCGAGAGATAGCGTCTTTGGTGGATGTCATCGAG
GAGACTTACAAAGCACCCGATTCTCTACACGTCCACGGCGACAGATTACTCAGCGAGGTC
ATGAACTTGGTCGGCGACGATTATCTATCTGCAATAAATGAGGTCTCCCTCAGAATCAAT
GAGTTCGGAGAGAGGCTGAGGGTTCTGAGTTTCGGAGAATCAGTTGAGTTGATGTGTGCT
TTGAAAAGATTAGAGAATTGTAAAGAGAGGTCCTCGATCCAGCCCCATCGGAAGAAAGCT
TCAATGGAGACGTTCTGGGGATTGGTGAGTGAGATGAAAGATAGGGTTGGAAAGGAGTAC
AGAGAAGACGCTAGAATGGTGATGATAGGGAGGAGAGAGAGGGCATGTGAGTCGGCTCGG
TGGGGAGAGCGAGTTCTGAAGTCGAGTGACTCAGTCCGCTTCGGTTCAGGAAGACTGGTC
TCGAACCGGTTTGCCTTTTCAATTCTCGAGTCGGTCGAGTCGTGA

Peptide Sequence

PEP ID

VIT_00s0477g00040.t01
PEP Infomation

pep chromosome:12X:Un:30043240:30044569:-1 gene:VIT_00s0477g00040 transcript:VIT_00s0477g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRSTKLRDLIGAIKDKASLSKAALLSKPNTLSLHLSLLRATTHEPSIPPHDKHIAALLS
FGNSSRATASAVIEALMDRLQNTHDASVAIKCLIAVHHIIRRGSFILQDQLSIYPSTGGR
NYLKLSGFRDSSDPITWELSSWVRWYSCYLEHVLSTSRVLGFFLCSSLSTVNKDEEVDQV
SALTNQQLIREIASLVDVIEETYKAPDSLHVHGDRLLSEVMNLVGDDYLSAINEVSLRIN
EFGERLRVLSFGESVELMCALKRLENCKERSSIQPHRKKASMETFWGLVSEMKDRVGKEY
REDARMVMIGRRERACESARWGERVLKSSDSVRFGSGRLVSNRFAFSILESVES

Transcript Sequence

Transcript ID

VIT_00s0477g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:30043240:30044569:-1 gene:VIT_00s0477g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAGGGAAGATTGAATTGAGAATTGGGAACGGGGAAGTGCTATTAAAAAAAGAAGGGAGGA
GGAAGCGGAGGAAGCAACTCAGCATCTGCGTCTCTAATGGGGCGAAGCACAAAACTGAGG
GACCTGATAGGAGCCATCAAGGACAAGGCTTCGCTGAGCAAAGCAGCTCTTCTCTCCAAG
CCCAACACGCTCTCTCTCCACCTATCCCTCCTCCGGGCCACCACTCACGAGCCCTCTATT
CCTCCCCATGACAAGCATATCGCCGCCCTCCTCTCCTTCGGAAACAGCTCACGCGCCACG
GCCTCCGCCGTCATCGAAGCCCTCATGGACCGCCTCCAGAACACCCACGACGCCTCCGTC
GCCATCAAGTGCCTCATCGCCGTCCACCACATCATCAGACGCGGCAGCTTTATCCTCCAA
GACCAGCTCTCCATCTACCCCTCCACCGGCGGCCGAAACTACCTCAAACTCTCCGGCTTC
CGCGACTCCTCTGATCCGATCACGTGGGAGCTCTCTTCTTGGGTCAGATGGTACTCTTGC
TATCTCGAACACGTCCTCTCAACTTCTCGAGTCTTGGGTTTCTTCCTCTGCTCTTCCTTG
TCCACCGTGAACAAAGACGAAGAAGTAGATCAAGTTTCAGCTCTCACGAACCAACAGCTG
ATCCGAGAGATAGCGTCTTTGGTGGATGTCATCGAGGAGACTTACAAAGCACCCGATTCT
CTACACGTCCACGGCGACAGATTACTCAGCGAGGTCATGAACTTGGTCGGCGACGATTAT
CTATCTGCAATAAATGAGGTCTCCCTCAGAATCAATGAGTTCGGAGAGAGGCTGAGGGTT
CTGAGTTTCGGAGAATCAGTTGAGTTGATGTGTGCTTTGAAAAGATTAGAGAATTGTAAA
GAGAGGTCCTCGATCCAGCCCCATCGGAAGAAAGCTTCAATGGAGACGTTCTGGGGATTG
GTGAGTGAGATGAAAGATAGGGTTGGAAAGGAGTACAGAGAAGACGCTAGAATGGTGATG
ATAGGGAGGAGAGAGAGGGCATGTGAGTCGGCTCGGTGGGGAGAGCGAGTTCTGAAGTCG
AGTGACTCAGTCCGCTTCGGTTCAGGAAGACTGGTCTCGAACCGGTTTGCCTTTTCAATT
CTCGAGTCGGTCGAGTCGTGACGATGTGACATCAAAATATCAGTCATCTTCACGGATATG
CCTATTTTAGCATCCTTGTCTTTTTTAATACAGTATGTAAAGTTTACCCTGATAATCAAG
GGAAAAAAAAAAAGAAAAAAAAAAGGATAAAATGGTGAAAATTAGATAATTAATAAAATT
GTCCTTTTTA