Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0475g00040.t01
CDS Infomation

cds chromosome:12X:Un:29979299:29982390:1 gene:VIT_00s0475g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTATCAACCTAAGGCTGTTCCTAGTCCAAGTTTAGTTCACAACAACTCGTTAGTTCAT
GGTCAGCATTCAGATTGTGGTGCCAACACAATGGATCCCATCAATGGAGGAAACAGTCTC
AACAACAACCCTAGTCTCGCTTCAAAGCAACGATTGCGTTGGACTCATGAGCTTCATGAA
CGCTTTGTTGATGCTGTTGCACAACTTGGTGGTCCAGACCGGGCTACACCCAAAGGTGTC
CTTAGAGTCATGGGTGTGCAAGGTTTAACAATATACCATGTCAAAAGCCATTTGCAGAAA
TATCGACTTGCAAAGTACCTTCCGGACTCATCATCTGATGGGAAAAAAGCTGACAAGAAA
GAGTCTGGGGATATGCTTTCCAGTTTGGATGGTTCTTCTGGGATGCAAATTACTGAGGCA
CTCAAGCTGCAGATGGAGGTGCAAAAGCGACTGCATGAGCAATTGGAGGTGCAAAGACAG
CTTCAGTTGCGAATAGAAGCCCAAGGAAAGTACTTGAAGAAGATAATAGAAGAGCAACAG
CGACTCAGTGGGGTTATTACAGAAGTGCCTGGTTCCGGGGTTTCTGTCCCAGTATCAGGT
GACAACTGTCTAGAATCCGACAAGACTGACCCAGCAACTCCTGCACCAACCTCGGAGGGG
CCCCTCCTAGATAAGGCTGCGAAGGAAACTGCTCCAGCCAAGAGTCTTTCAATAGATGAA
TCTTTTTCATCCCATCATGAGCCACTGACACCAGATTCCGGTTGCCATGTCAATTCCCCT
GATGAGAGCCCAAAAGGTGAGAGATCAGTGAAGAAGCAGCGGGTGAGCATAGGTGCAGCA
TATGCCAAACAAGAGATGGTTCTTACGCACCAGATACTAGAGTCAAGCTTAAGTTCCTCC
TTCCATCAACCACATTCAGTTTTTCTGAACAGAGATCAATTTGATCCTCAAGCAGGGATA
TCAATCAGCAATGAAGACCAACTGGAAAAGGTTCCAAGCAGCAATCACTAG

Peptide Sequence

PEP ID

VIT_00s0475g00040.t01
PEP Infomation

pep chromosome:12X:Un:29979299:29982390:1 gene:VIT_00s0475g00040 transcript:VIT_00s0475g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MYQPKAVPSPSLVHNNSLVHGQHSDCGANTMDPINGGNSLNNNPSLASKQRLRWTHELHE
RFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKK
ESGDMLSSLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQ
RLSGVITEVPGSGVSVPVSGDNCLESDKTDPATPAPTSEGPLLDKAAKETAPAKSLSIDE
SFSSHHEPLTPDSGCHVNSPDESPKGERSVKKQRVSIGAAYAKQEMVLTHQILESSLSSS
FHQPHSVFLNRDQFDPQAGISISNEDQLEKVPSSNH

Transcript Sequence

Transcript ID

VIT_00s0475g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:29979299:29982390:1 gene:VIT_00s0475g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTTTCTAGATAAATGACAAATGTATCAACCTAAGGCTGTTCCTAGTCCAAGTTTAGTTC
ACAACAACTCGTTAGTTCATGGTCAGCATTCAGATTGTGGTGCCAACACAATGGATCCCA
TCAATGGAGGAAACAGTCTCAACAACAACCCTAGTCTCGCTTCAAAGCAACGATTGCGTT
GGACTCATGAGCTTCATGAACGCTTTGTTGATGCTGTTGCACAACTTGGTGGTCCAGACC
GGGCTACACCCAAAGGTGTCCTTAGAGTCATGGGTGTGCAAGGTTTAACAATATACCATG
TCAAAAGCCATTTGCAGAAATATCGACTTGCAAAGTACCTTCCGGACTCATCATCTGATG
GGAAAAAAGCTGACAAGAAAGAGTCTGGGGATATGCTTTCCAGTTTGGATGGTTCTTCTG
GGATGCAAATTACTGAGGCACTCAAGCTGCAGATGGAGGTGCAAAAGCGACTGCATGAGC
AATTGGAGGTGCAAAGACAGCTTCAGTTGCGAATAGAAGCCCAAGGAAAGTACTTGAAGA
AGATAATAGAAGAGCAACAGCGACTCAGTGGGGTTATTACAGAAGTGCCTGGTTCCGGGG
TTTCTGTCCCAGTATCAGGTGACAACTGTCTAGAATCCGACAAGACTGACCCAGCAACTC
CTGCACCAACCTCGGAGGGGCCCCTCCTAGATAAGGCTGCGAAGGAAACTGCTCCAGCCA
AGAGTCTTTCAATAGATGAATCTTTTTCATCCCATCATGAGCCACTGACACCAGATTCCG
GTTGCCATGTCAATTCCCCTGATGAGAGCCCAAAAGGTGAGAGATCAGTGAAGAAGCAGC
GGGTGAGCATAGGTGCAGCATATGCCAAACAAGAGATGGTTCTTACGCACCAGATACTAG
AGTCAAGCTTAAGTTCCTCCTTCCATCAACCACATTCAGTTTTTCTGAACAGAGATCAAT
TTGATCCTCAAGCAGGGATATCAATCAGCAATGAAGACCAACTGGAAAAGGTTCCAAGCA
GCAATCACTAGGTCAGTATGCTGCATGGTATTTTCTGGGCTTAATTTATACCCTGTATGT
GTAGTTGCTAGGAAAAAAATTTCATTAGGTCAAGGAACCAATGTTGAGTTTAGA