Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0471g00050.t01
CDS Infomation

cds chromosome:12X:Un:29900547:29902983:-1 gene:VIT_00s0471g00050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterized protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:F6HJR2]
Sequence

GTCTGTATCGATAACGACGCATGCCAAGACTGCACACTTGTTAAGGTTGATAGCGCTAAC
AAGCACGGGATCCTGCTGGAGATGGTCCAAGTTCTAACGGATCTTGAACTAGTTATTTCC
AAATCTTACATCTGCTCCGATGGTGGATGGTTCATGGACGTGTTCCACGTGACGGATCAG
CTTGGGAACAAACTCACTGACGAAAGCCTCATACTTTACATTCAGCAGGCGTTATGTGCG
AATAGGAAGCAGGGAATTTCCAAGGAGTTGCAAGCCCGCCTTGGAAGAGAGATGAATCCA
CGACATGTTTCAACAGAGCACACAGCCTTTGAGATAACCGGAACAGATAGACCTGGTCTC
ATGTCCGAGATATCAGCAGTTCTGGCTGAGTTGTCATGCCATGTCACTGCCGCCGTGGCA
TGGACCCACAACTCCCGAGTTGCTTGCATTATCTGCCTGGAAGATGAATTGAAAGGTGGA
CCTATCAGGGACCCGGAGCGCCTGGCCCATGTGGAAGAGCAGCTTGAGAATGTGGTGGAG
GCCCGCCACCAGAGTGGGGAGAGGAGGAAAGTGAGGTTAACCGCCCCTGTTGCTGGGCGA
ACCCACACTGATCGTAGGCTGCATCAGTTGATGTTTGCTGATAAGGATTACGAGAGGTGC
TGTGGTGGGTGCGACGGTAGCAGTGATAGGATTCAAGTGTCCATAGAAAATTGTAAGGAG
AAAGGGTATTCAGTGGTGAATGTGAAGAGCAGAGACCGTCCCAAGCTGCTGTTTGACACT
GTGTGCACCCTCACGGACATGCAGTATGTGGTGTTCCATGCAGCTGTGAGCTCTAAGGGC
TCCATTGCTGTTCAGGAGTATTTTATCCGGCAAATGGATGGATGTACTTTGGGTACACAG
AGCGAGAGGAATAGAGTTGCCCAATGCTTGATTGCTGCAATAGAGCGGAGGGTCACCCAT
GGATTGAGGCTAGATATACGCATTAAGAACAGGTTGGGACTGCTCTCAGATATCACACGG
GTGTTTCGAGAGAACGGGCTGTCGATAAGGATGGCTGAAATTGGGATACACGGCGAGAGA
GCCAGTGGATCATTCTATGTAACAGACGTTTCGGGACGCGATGTAAGTCCCAACACAGTA
GAGTTGATCAGGAAAGAGATCGGGGGAACAATTATGGCAGTTAATAAGTCCTCCGTCCCA
CCTTCCCTGCCTGCCTCACCCAGCAGAGACAGAAGCACGGCAAGCAGCGTAGAAAACAGG
CCAAGATTCTCATTAGGAACCTTGTGGTCTCAGATTGAGCGCTTCTCAAGCAATTTCGGT
CCTATAGGGATGTGA

Peptide Sequence

PEP ID

VIT_00s0471g00050.t01
PEP Infomation

pep chromosome:12X:Un:29900547:29902983:-1 gene:VIT_00s0471g00050 transcript:VIT_00s0471g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterized protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:F6HJR2]
Sequence

VCIDNDACQDCTLVKVDSANKHGILLEMVQVLTDLELVISKSYICSDGGWFMDVFHVTDQ
LGNKLTDESLILYIQQALCANRKQGISKELQARLGREMNPRHVSTEHTAFEITGTDRPGL
MSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLAHVEEQLENVVE
ARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYERCCGGCDGSSDRIQVSIENCKE
KGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQMDGCTLGTQ
SERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLSIRMAEIGIHGER
ASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASPSRDRSTASSVENR
PRFSLGTLWSQIERFSSNFGPIGM

Transcript Sequence

Transcript ID

VIT_00s0471g00050.t01
Transcript Infomation

cdna chromosome:12X:Un:29900547:29902983:-1 gene:VIT_00s0471g00050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterized protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:F6HJR2]
Sequence

CAGGTCTGTATCGATAACGACGCATGCCAAGACTGCACACTTGTTAAGGTTGATAGCGCT
AACAAGCACGGGATCCTGCTGGAGATGGTCCAAGTTCTAACGGATCTTGAACTAGTTATT
TCCAAATCTTACATCTGCTCCGATGGTGGATGGTTCATGGACGTGTTCCACGTGACGGAT
CAGCTTGGGAACAAACTCACTGACGAAAGCCTCATACTTTACATTCAGCAGGCGTTATGT
GCGAATAGGAAGCAGGGAATTTCCAAGGAGTTGCAAGCCCGCCTTGGAAGAGAGATGAAT
CCACGACATGTTTCAACAGAGCACACAGCCTTTGAGATAACCGGAACAGATAGACCTGGT
CTCATGTCCGAGATATCAGCAGTTCTGGCTGAGTTGTCATGCCATGTCACTGCCGCCGTG
GCATGGACCCACAACTCCCGAGTTGCTTGCATTATCTGCCTGGAAGATGAATTGAAAGGT
GGACCTATCAGGGACCCGGAGCGCCTGGCCCATGTGGAAGAGCAGCTTGAGAATGTGGTG
GAGGCCCGCCACCAGAGTGGGGAGAGGAGGAAAGTGAGGTTAACCGCCCCTGTTGCTGGG
CGAACCCACACTGATCGTAGGCTGCATCAGTTGATGTTTGCTGATAAGGATTACGAGAGG
TGCTGTGGTGGGTGCGACGGTAGCAGTGATAGGATTCAAGTGTCCATAGAAAATTGTAAG
GAGAAAGGGTATTCAGTGGTGAATGTGAAGAGCAGAGACCGTCCCAAGCTGCTGTTTGAC
ACTGTGTGCACCCTCACGGACATGCAGTATGTGGTGTTCCATGCAGCTGTGAGCTCTAAG
GGCTCCATTGCTGTTCAGGAGTATTTTATCCGGCAAATGGATGGATGTACTTTGGGTACA
CAGAGCGAGAGGAATAGAGTTGCCCAATGCTTGATTGCTGCAATAGAGCGGAGGGTCACC
CATGGATTGAGGCTAGATATACGCATTAAGAACAGGTTGGGACTGCTCTCAGATATCACA
CGGGTGTTTCGAGAGAACGGGCTGTCGATAAGGATGGCTGAAATTGGGATACACGGCGAG
AGAGCCAGTGGATCATTCTATGTAACAGACGTTTCGGGACGCGATGTAAGTCCCAACACA
GTAGAGTTGATCAGGAAAGAGATCGGGGGAACAATTATGGCAGTTAATAAGTCCTCCGTC
CCACCTTCCCTGCCTGCCTCACCCAGCAGAGACAGAAGCACGGCAAGCAGCGTAGAAAAC
AGGCCAAGATTCTCATTAGGAACCTTGTGGTCTCAGATTGAGCGCTTCTCAAGCAATTTC
GGTCCTATAGGGATGTGAGGCTTCAAATTCTTGCCAGCCG