Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_00s0471g00010.t01
CDS Infomation	cds chromosome:12X:Un:29866220:29868179:1 gene:VIT_00s0471g00010 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HJQ8]
Sequence	ATGCCGATGTTTCAGCATTATCAGAAGGATGGGCTTGTGGGGTTTGACGGTGGTGGTGAT GGGCATGTTCTAGATCTGGACACTGCCGTTAAAGATGGAGTTTTGGGCGGCGGTGGTGGT GGGGTGGTTGGAGGTATTGCTGAGAAACTGGATCTGAAGAGGATGATTGAAGAGCTTGAC TTGTCGGAAATTCCTTCAGTGTTTATTTGCCCAATCTCTCTTGAACCAATGCAGGACCCT GTAACCCTTTGCACAGGCCAAACCTATGAGAGGTCTAACATTCTCAAATGGTTCAGTTTG GGGCACCTCACTTGCCCCACAACGATGCAAGAGCTCTGGGATGATTCGGTTACGCCGAAT AAGACCCTTTACCATCTAATTTACAGTTGGTTTTCACAGAAGTATTTGCTTATGAAGAAG AGATCAGAAGATGTACAGGGACGGGCATCAGAGCTTCTGGAGACGCTAAAGAAGGTGAAG GGTCAGGCCAGAGTTCAAGCTCTTAAGGAGCTTCATCAGGTTGTGGCGGCCCATGCTACT GCAAGGAAGACAGTGGAAGAAGGTGGAGTTGCTCTGATTTCAGCTTTATTGGGCCCCTTT ACCTCCCATGCTGTTGGTTCTGAAGTAATTGGGGTACTTGTTAACTTGACACTTGATTCA GAATCCAAAGCAAATTTGATGCAACCAGCAAAGATCTCTTTAATGGTGGACCTGTTAAAC GAGGGATCGATCGAGACAAAGATCAACTCTACTCGATTGATAGAAATGTTGATGGAGGAG AAGGATTTTCGTTCAGAAATTGTTTCTAGTCATAGTCTTTTGGTTGGATTAATGAGGCTA GTGAAGGATAAGAGGCATCCCAATGGAAACTTGCCTGGGCTTACTCTCCTAAGAACAATA TGCTTACATAAACAAGTCAGGAACTTGTTTGTGAGCATTGGGGCCATTCCTCAACTGGTA GAATTGTTGCCTGCCTTGAATCCTGATTGCTTGGAATCAGCCCTTTTCATCTTGGATACC TTGTCATCTCTACCAGAGGGAAGGTTGGCTTTGAGGGATTGTCTGAACACTATACCGAAT ATGGTGAGGCTATTGATGAGGGTTTCGGAGAGCTGTACTCAATATGCTTTAGCAATCTTA TGGTCTGTATGCAAACTGGCTCCTGAGGAATGTTCATCAATTGCTGTGGAGGCTGGTCTT GCAGCAAAGCTCCTTCTCGTCATCCAGAGTGGTTGCAATCCTGTCTTGAAGCAAAGATCT GCAGAGCTCTTGAAACTGTGCAGTCTCAATTATACAGATACCACCTTCATTTCCAAGTGT AAGCTTACAAAAACAATCCAATGA

Peptide Sequence

PEP ID	VIT_00s0471g00010.t01
PEP Infomation	pep chromosome:12X:Un:29866220:29868179:1 gene:VIT_00s0471g00010 transcript:VIT_00s0471g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HJQ8]
Sequence	MPMFQHYQKDGLVGFDGGGDGHVLDLDTAVKDGVLGGGGGGVVGGIAEKLDLKRMIEELD LSEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHLTCPTTMQELWDDSVTPN KTLYHLIYSWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQALKELHQVVAAHAT ARKTVEEGGVALISALLGPFTSHAVGSEVIGVLVNLTLDSESKANLMQPAKISLMVDLLN EGSIETKINSTRLIEMLMEEKDFRSEIVSSHSLLVGLMRLVKDKRHPNGNLPGLTLLRTI CLHKQVRNLFVSIGAIPQLVELLPALNPDCLESALFILDTLSSLPEGRLALRDCLNTIPN MVRLLMRVSESCTQYALAILWSVCKLAPEECSSIAVEAGLAAKLLLVIQSGCNPVLKQRS AELLKLCSLNYTDTTFISKCKLTKTIQ

Transcript Sequence

Transcript ID	VIT_00s0471g00010.t01
Transcript Infomation	cdna chromosome:12X:Un:29866220:29868179:1 gene:VIT_00s0471g00010 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HJQ8]
Sequence	GCCTTTGTAGGGCATGTCCTCTCTGTCTTCTCTCTCCTCTCTGTGTGGTGGTATGGCCTT CAACTTCCCTTGAGTACTCAGACTTATCTCAGGTTCTAATGATCTGGGTTCATTATTGTT GTTATTATATTTTGTTTTCAATTTCTCAAACGTTTCTCTGATTCCAAGGCCTTTTGATTT ATTTGTAGTGTGGTGTTGGTCTGTTGAGTGGAATAAGTTTTTCTTTGGTTTCTTTTTGAT CTTTTTGCTGTTGTGTTGTTGGGTTGATGATGCAATCGTTTTCAAGCTATGAATAGTGAG TGAGCTTTAGTGTTGGGGAAGATAAGAAGGTTGATTATGTGGTTATGATGTTTGTTATGA TGGTGATGAGTCTTTTGACCACGGAAAGAGATCGGATAAAGCTAAAAAAATAAAGGATGC GTACAATAAAGAGAGTATTGTTGGCTGTGTTGTGAACGAGAGAGAACTTGATTGCTTTCA TTCTTCTTTATCTTTTTTTCACACATCTCATGTGCAGGGTAGATGTAATGTGGCTTGAAT GCTGATTTTGAGGGTTCTCCTTTTTGGGGGTTTCTGAGGTTTGGGGGGAGTTTGGTCTAA AGGGGTTTCAGAAATGCCGATGTTTCAGCATTATCAGAAGGATGGGCTTGTGGGGTTTGA CGGTGGTGGTGATGGGCATGTTCTAGATCTGGACACTGCCGTTAAAGATGGAGTTTTGGG CGGCGGTGGTGGTGGGGTGGTTGGAGGTATTGCTGAGAAACTGGATCTGAAGAGGATGAT TGAAGAGCTTGACTTGTCGGAAATTCCTTCAGTGTTTATTTGCCCAATCTCTCTTGAACC AATGCAGGACCCTGTAACCCTTTGCACAGGCCAAACCTATGAGAGGTCTAACATTCTCAA ATGGTTCAGTTTGGGGCACCTCACTTGCCCCACAACGATGCAAGAGCTCTGGGATGATTC GGTTACGCCGAATAAGACCCTTTACCATCTAATTTACAGTTGGTTTTCACAGAAGTATTT GCTTATGAAGAAGAGATCAGAAGATGTACAGGGACGGGCATCAGAGCTTCTGGAGACGCT AAAGAAGGTGAAGGGTCAGGCCAGAGTTCAAGCTCTTAAGGAGCTTCATCAGGTTGTGGC GGCCCATGCTACTGCAAGGAAGACAGTGGAAGAAGGTGGAGTTGCTCTGATTTCAGCTTT ATTGGGCCCCTTTACCTCCCATGCTGTTGGTTCTGAAGTAATTGGGGTACTTGTTAACTT GACACTTGATTCAGAATCCAAAGCAAATTTGATGCAACCAGCAAAGATCTCTTTAATGGT GGACCTGTTAAACGAGGGATCGATCGAGACAAAGATCAACTCTACTCGATTGATAGAAAT GTTGATGGAGGAGAAGGATTTTCGTTCAGAAATTGTTTCTAGTCATAGTCTTTTGGTTGG ATTAATGAGGCTAGTGAAGGATAAGAGGCATCCCAATGGAAACTTGCCTGGGCTTACTCT CCTAAGAACAATATGCTTACATAAACAAGTCAGGAACTTGTTTGTGAGCATTGGGGCCAT TCCTCAACTGGTAGAATTGTTGCCTGCCTTGAATCCTGATTGCTTGGAATCAGCCCTTTT CATCTTGGATACCTTGTCATCTCTACCAGAGGGAAGGTTGGCTTTGAGGGATTGTCTGAA CACTATACCGAATATGGTGAGGCTATTGATGAGGGTTTCGGAGAGCTGTACTCAATATGC TTTAGCAATCTTATGGTCTGTATGCAAACTGGCTCCTGAGGAATGTTCATCAATTGCTGT GGAGGCTGGTCTTGCAGCAAAGCTCCTTCTCGTCATCCAGAGTGGTTGCAATCCTGTCTT GAAGCAAAGATCTGCAGAGCTCTTGAAACTGTGCAGTCTCAATTATACAGATACCACCTT CATTTCCAAGTGTAAGCTTACAAAAACAATCCAATGAAAG