Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0463g00020.t01
CDS Infomation

cds chromosome:12X:Un:29700118:29704632:-1 gene:VIT_00s0463g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAACGTCTGAGGAACACCAAAGTTCAGGTGGTATCCACAGGTTGTACCACCAACCT
GTGCAAGAGCTCCAACCCTATTGCTTGTCTGAAATCCAAATTTTAGACAACAATGAGTGC
CCCAGCAATGGCATCCAGCAAACGCACTTATCCTTTGGAACTTACAATGAACAGTACTTC
ACACTGGAATCAGCCCCAGTAACTGCTGGTTACAATGTGTGTGATTCCTCCCCATCTGCG
GGCAGCATCTCATCTAACAGGAGTCCCTTTTCACCTCAAGGTTCTCAATCGTACTTGTCA
GACCCACATCATTCCCCTGATAATGCATCTGGATCGCCAATAAGTGGGTCTTCTGGGGTT
GATGATGGCAATGAACTGAGACACAAACTGAGAGAGTTGGAACTTTCACTGCTAGGGCCT
GAATCAGATACTACTGACAGTTGTAATTGCTCTTTCAGAAGTGGTGCCCACCAAGCCGCC
TCAATAGCTAGGTGGAAAGTAGAAATGATCCCCAGGTTAGACTTGAAACAAGTGCTTGTA
GCCTGTGCAGAAGCGGTGTCAGAAAATGATATGTCCAGGACAGCAGATCTAATGGGTGTA
TTGGAACAGATGGTCTCAGTTTCTGGAGAGCCCATCCAAAGGTTGGGTGCATACATGTTG
GAAGGACTTCGAGCAAGGTTGGAATTATCAGGGAGTTGCATCTACAAAGCCCTAAAGTGC
AAAGAGCCCACAGGCCCAGAATTGCTATCTTACATGCACATCCTCTATCAGATCTGTCCC
TACTACAAGTTTGCCTACATGTCTGCCAACGTTGTTATTGGGGAGGCCATAAAAAATGAA
CCAAGAATCCACATCATTGATTTTCAGATTGCGCAGGGCAGCCAGTGGGTATCCCTCATC
CAGGCCCTTGCATGTCGGCCTGGTGGAGCCCCACTCATCCGCATAACAGGCGTGGATGAT
TCTGATTCAGCTCATGCTCGTGGTGGAGGACTTCATATGGTGGGGCTAAGGCTATCAAAG
GTTGCTGAGTCCTGCAATGTGCCATTTGAGTTCCATGCTGCAGGCATGTCTGGTAGTGAG
GTTGAACTAGAAAACCTTAGGATTTGTCATGGGGAAGCCCTGGCTGTGAATTTTCCATAC
ATGTTACATCACATGCCAGATGAGAGTGTGAGCACTGCGAATCACAGAGACCGGCTGTTG
AGGCTAATTAAGAGCCTGCAACCCAAGGTTGTGACGCTTGTTGAGCAAGAATCCAACACC
AACACTTCCGCATTTCTCCCACGGTTTGTTGAGACACTGGATTACTATACAGCTATGTTT
GAGTCCATTGATGTTGCACGGCCAAGGAATGACAAGCAGCGGATCAATGCGGAGCAGCAC
TGTGTAGCTCGAGACATAGTCAACATAATAGCATGCGAGGGGGCTGAAAGGGTGGAACGG
CACGAGCTTCTTGGTAAATGGAGGTCAAGATTTTTAATGGCTGGGTTTAATCCATATCCA
TTAAGCTCCTCTGTGAGTCTCGCCATCAAGGATATGTTGAAGGAGTATAGCCCGAATTTC
TGGCTTCAAGAGAGGAACGGAGCCCTCTATCTCGGTTGGAAGAACAGGATCTTGGCAACC
TCCTGTGCATGGGTGTGA

Peptide Sequence

PEP ID

VIT_00s0463g00020.t01
PEP Infomation

pep chromosome:12X:Un:29700118:29704632:-1 gene:VIT_00s0463g00020 transcript:VIT_00s0463g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQTSEEHQSSGGIHRLYHQPVQELQPYCLSEIQILDNNECPSNGIQQTHLSFGTYNEQYF
TLESAPVTAGYNVCDSSPSAGSISSNRSPFSPQGSQSYLSDPHHSPDNASGSPISGSSGV
DDGNELRHKLRELELSLLGPESDTTDSCNCSFRSGAHQAASIARWKVEMIPRLDLKQVLV
ACAEAVSENDMSRTADLMGVLEQMVSVSGEPIQRLGAYMLEGLRARLELSGSCIYKALKC
KEPTGPELLSYMHILYQICPYYKFAYMSANVVIGEAIKNEPRIHIIDFQIAQGSQWVSLI
QALACRPGGAPLIRITGVDDSDSAHARGGGLHMVGLRLSKVAESCNVPFEFHAAGMSGSE
VELENLRICHGEALAVNFPYMLHHMPDESVSTANHRDRLLRLIKSLQPKVVTLVEQESNT
NTSAFLPRFVETLDYYTAMFESIDVARPRNDKQRINAEQHCVARDIVNIIACEGAERVER
HELLGKWRSRFLMAGFNPYPLSSSVSLAIKDMLKEYSPNFWLQERNGALYLGWKNRILAT
SCAWV

Transcript Sequence

Transcript ID

VIT_00s0463g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:29700118:29704632:-1 gene:VIT_00s0463g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTACTCCTCTCTGCCGTCAGAAGGGGGTGGAAGAAATGGGAATCTTGAGCTGACAATCC
CCAAACCAAGCATTTCCCTGTAGCAGAAGCATATGTCATAAGTTGATAAAGCATGGTGTA
GAGTTGCTGAATTACGCCTAACCAGGATTATGGCTGTGGAAACAAATCATCTGGCTGCTT
ACTGAAAGGGCACGGCTCCTTGACTGCTTATCAAGATTTGCTGAGCAATAACATTTCACC
TTTTAACAAATCAGTAGTCTATTGAATCGCTGAGAAAAATCCTGTAAGAAAGAGTTTCTA
CACTCCTGCATTTGACTGTCTTGCTTAGTCAATCATTAGGCTATTCTTAGATGCAAACGT
CTGAGGAACACCAAAGTTCAGGTGGTATCCACAGGTTGTACCACCAACCTGTGCAAGAGC
TCCAACCCTATTGCTTGTCTGAAATCCAAATTTTAGACAACAATGAGTGCCCCAGCAATG
GCATCCAGCAAACGCACTTATCCTTTGGAACTTACAATGAACAGTACTTCACACTGGAAT
CAGCCCCAGTAACTGCTGGTTACAATGTGTGTGATTCCTCCCCATCTGCGGGCAGCATCT
CATCTAACAGGAGTCCCTTTTCACCTCAAGGTTCTCAATCGTACTTGTCAGACCCACATC
ATTCCCCTGATAATGCATCTGGATCGCCAATAAGTGGGTCTTCTGGGGTTGATGATGGCA
ATGAACTGAGACACAAACTGAGAGAGTTGGAACTTTCACTGCTAGGGCCTGAATCAGATA
CTACTGACAGTTGTAATTGCTCTTTCAGAAGTGGTGCCCACCAAGCCGCCTCAATAGCTA
GGTGGAAAGTAGAAATGATCCCCAGGTTAGACTTGAAACAAGTGCTTGTAGCCTGTGCAG
AAGCGGTGTCAGAAAATGATATGTCCAGGACAGCAGATCTAATGGGTGTATTGGAACAGA
TGGTCTCAGTTTCTGGAGAGCCCATCCAAAGGTTGGGTGCATACATGTTGGAAGGACTTC
GAGCAAGGTTGGAATTATCAGGGAGTTGCATCTACAAAGCCCTAAAGTGCAAAGAGCCCA
CAGGCCCAGAATTGCTATCTTACATGCACATCCTCTATCAGATCTGTCCCTACTACAAGT
TTGCCTACATGTCTGCCAACGTTGTTATTGGGGAGGCCATAAAAAATGAACCAAGAATCC
ACATCATTGATTTTCAGATTGCGCAGGGCAGCCAGTGGGTATCCCTCATCCAGGCCCTTG
CATGTCGGCCTGGTGGAGCCCCACTCATCCGCATAACAGGCGTGGATGATTCTGATTCAG
CTCATGCTCGTGGTGGAGGACTTCATATGGTGGGGCTAAGGCTATCAAAGGTTGCTGAGT
CCTGCAATGTGCCATTTGAGTTCCATGCTGCAGGCATGTCTGGTAGTGAGGTTGAACTAG
AAAACCTTAGGATTTGTCATGGGGAAGCCCTGGCTGTGAATTTTCCATACATGTTACATC
ACATGCCAGATGAGAGTGTGAGCACTGCGAATCACAGAGACCGGCTGTTGAGGCTAATTA
AGAGCCTGCAACCCAAGGTTGTGACGCTTGTTGAGCAAGAATCCAACACCAACACTTCCG
CATTTCTCCCACGGTTTGTTGAGACACTGGATTACTATACAGCTATGTTTGAGTCCATTG
ATGTTGCACGGCCAAGGAATGACAAGCAGCGGATCAATGCGGAGCAGCACTGTGTAGCTC
GAGACATAGTCAACATAATAGCATGCGAGGGGGCTGAAAGGGTGGAACGGCACGAGCTTC
TTGGTAAATGGAGGTCAAGATTTTTAATGGCTGGGTTTAATCCATATCCATTAAGCTCCT
CTGTGAGTCTCGCCATCAAGGATATGTTGAAGGAGTATAGCCCGAATTTCTGGCTTCAAG
AGAGGAACGGAGCCCTCTATCTCGGTTGGAAGAACAGGATCTTGGCAACCTCCTGTGCAT
GGGTGTGAAAACCTGTGCGTACTTTAGGAGTTACAGCATACACCTGTAGATTTTTTTTCC
CCTTGTATTA