Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0445g00010.t01
CDS Infomation

cds chromosome:12X:Un:29189009:29194304:-1 gene:VIT_00s0445g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTCATTCGGACTGGGAGAGGTGTGCGCGTGTTTTCATGGGGTTGGTAGTGATTTTA
TCTGTCCGGATTTCGAGCGGATACACTGACCTGCGCGATGTTACTGCAGTAAATAGCTTA
TATGTTGCTTTAGGCTACCCTCCTCTTCCTGGATGGGTTCCTATTGGAGGAGACCCATGC
TTGGATGGTTGGCAAGGCATCCAATGTGTCAATTCAAACATTACGGGATTAATTCTTAAT
GGTGCAAATTTGGGAGGAGAATTGAGCGGGAACTTGGATCTTTTTACATCATTGATACAG
ATGGATCTGAGCAACAACCACATTGGAGGTAGCATTCCATCCAATTTGCCCCCTACGATC
ATGCAACTTTTTCTTTCAGATAACCAGTTCAGTGGAAGCATCCCTGTTAATTTGTCTTCT
TTTACTCAATTGTCTGCCGTGTCATTAAACAATAACCATCTAACAGGAGGAATACCAGAT
GCCTTTCAGCAGCTTACAAGTTTGATAAATATGGATCTGTCAAGTAACAGTTTGAGTGGT
CAACTGCCTCCTTCAATGGGAAATTTGTTAGCTCTTACCACATTGCACTTGCAGAACAAT
CAAATTTCTGGAGTCCTTGATGTTTTGCAGGATCTTCTCCTAAACGAACTGAACATAGAG
AACAATCTGTTCTCTGGGCCTATACCAGCGAAGTTGCTGAGTATTCCAAATTTCAGAAAA
GATGGAAACCCATTTAACACCACAATTCTTCCTCCTCCTCCGACTTCACCCCCAACTTCG
CCCCCTTCATCAGCTCCAGCTATGCCACCACCATCTCTTGGAATTGCTAACTGGACAGCA
TCTTCACCTGAAACACTAACTCCTCCAGGATCAAGCAATTTTTTTACAAATAAAAGGATC
GTTTGGATATCGATTGCTGGGGTTATACTGCTTGCGGCAATTGCATTAGGACTATGCCTT
CTTAAGTCAAGATGCTGTGGAGGCAGGCAAGTGACTTACAAAATGACCAGTAGGGATAAA
CTGGGTGCTTTTGCAACAAAGAATCCTAAATACAAGGAATATTTGCTACAATCTAATAAT
CAAATGGAGAAAGTTACCACAGAGGTAGTTATGGGGCCACAGGATGGATATGGAACAGAT
CATAGAAAAGTGGGTTTAAGTTCAAAGCCACAGGATGAACAGGAGAGGGATGGGAAGACA
ATCAATGCAATCTCAAGGCATAAGAAGGATCATAAGATTGACATGACAGAATATGGTGTG
AATAACATGCCTCTGCTGCCCTCACCACCACTTCCACCAGTTCTCCCACATAACTCTGTT
GATGAGGCCATGGTGAAGCCATCTGTGCCTGCTGGAATGGCTATTAGGAGTCATCCTCTC
AAAAGTTTGAGCTCTCAAATTTCTGTAAGCTATTTTTCCGTTGGATTGCTTCAACAGTAT
ACAAATAGCTTTTCTCAAGGAAATCTTATTGGAGAAGGCACACTTGGAAGCGTTTATAGA
GCTGAGCTTCCTGATGGAAAGCTATTGGCAGTCAAGAAATTACAGCCTGCTGTTTCCAGG
CAGCTGAGTGATGATGGATTTCTTAATCTAGTGTCAAGCATCTCTAAACTTCAACATGTC
AACGTTGTGAAGCTTGTGGGCTACTGTGCTGAGTATGGACAACGGCTGCTTGTGCATGAA
TATTGCAGAAATGGGACACTTAATGATGCACTGCACTTGGAGGATGAGATCCACAGCAAA
CTTTCTTGGAGTGCACGCATCCGGATAGCGTTGGGAGCTGCAAGAGCCCTGGAGTAA

Peptide Sequence

PEP ID

VIT_00s0445g00010.t01
PEP Infomation

pep chromosome:12X:Un:29189009:29194304:-1 gene:VIT_00s0445g00010 transcript:VIT_00s0445g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGHSDWERCARVFMGLVVILSVRISSGYTDLRDVTAVNSLYVALGYPPLPGWVPIGGDPC
LDGWQGIQCVNSNITGLILNGANLGGELSGNLDLFTSLIQMDLSNNHIGGSIPSNLPPTI
MQLFLSDNQFSGSIPVNLSSFTQLSAVSLNNNHLTGGIPDAFQQLTSLINMDLSSNSLSG
QLPPSMGNLLALTTLHLQNNQISGVLDVLQDLLLNELNIENNLFSGPIPAKLLSIPNFRK
DGNPFNTTILPPPPTSPPTSPPSSAPAMPPPSLGIANWTASSPETLTPPGSSNFFTNKRI
VWISIAGVILLAAIALGLCLLKSRCCGGRQVTYKMTSRDKLGAFATKNPKYKEYLLQSNN
QMEKVTTEVVMGPQDGYGTDHRKVGLSSKPQDEQERDGKTINAISRHKKDHKIDMTEYGV
NNMPLLPSPPLPPVLPHNSVDEAMVKPSVPAGMAIRSHPLKSLSSQISVSYFSVGLLQQY
TNSFSQGNLIGEGTLGSVYRAELPDGKLLAVKKLQPAVSRQLSDDGFLNLVSSISKLQHV
NVVKLVGYCAEYGQRLLVHEYCRNGTLNDALHLEDEIHSKLSWSARIRIALGAARALE

Transcript Sequence

Transcript ID

VIT_00s0445g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:29189009:29194304:-1 gene:VIT_00s0445g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTCATTCGGACTGGGAGAGGTGTGCGCGTGTTTTCATGGGGTTGGTAGTGATTTTA
TCTGTCCGGATTTCGAGCGGATACACTGACCTGCGCGATGTTACTGCAGTAAATAGCTTA
TATGTTGCTTTAGGCTACCCTCCTCTTCCTGGATGGGTTCCTATTGGAGGAGACCCATGC
TTGGATGGTTGGCAAGGCATCCAATGTGTCAATTCAAACATTACGGGATTAATTCTTAAT
GGTGCAAATTTGGGAGGAGAATTGAGCGGGAACTTGGATCTTTTTACATCATTGATACAG
ATGGATCTGAGCAACAACCACATTGGAGGTAGCATTCCATCCAATTTGCCCCCTACGATC
ATGCAACTTTTTCTTTCAGATAACCAGTTCAGTGGAAGCATCCCTGTTAATTTGTCTTCT
TTTACTCAATTGTCTGCCGTGTCATTAAACAATAACCATCTAACAGGAGGAATACCAGAT
GCCTTTCAGCAGCTTACAAGTTTGATAAATATGGATCTGTCAAGTAACAGTTTGAGTGGT
CAACTGCCTCCTTCAATGGGAAATTTGTTAGCTCTTACCACATTGCACTTGCAGAACAAT
CAAATTTCTGGAGTCCTTGATGTTTTGCAGGATCTTCTCCTAAACGAACTGAACATAGAG
AACAATCTGTTCTCTGGGCCTATACCAGCGAAGTTGCTGAGTATTCCAAATTTCAGAAAA
GATGGAAACCCATTTAACACCACAATTCTTCCTCCTCCTCCGACTTCACCCCCAACTTCG
CCCCCTTCATCAGCTCCAGCTATGCCACCACCATCTCTTGGAATTGCTAACTGGACAGCA
TCTTCACCTGAAACACTAACTCCTCCAGGATCAAGCAATTTTTTTACAAATAAAAGGATC
GTTTGGATATCGATTGCTGGGGTTATACTGCTTGCGGCAATTGCATTAGGACTATGCCTT
CTTAAGTCAAGATGCTGTGGAGGCAGGCAAGTGACTTACAAAATGACCAGTAGGGATAAA
CTGGGTGCTTTTGCAACAAAGAATCCTAAATACAAGGAATATTTGCTACAATCTAATAAT
CAAATGGAGAAAGTTACCACAGAGGTAGTTATGGGGCCACAGGATGGATATGGAACAGAT
CATAGAAAAGTGGGTTTAAGTTCAAAGCCACAGGATGAACAGGAGAGGGATGGGAAGACA
ATCAATGCAATCTCAAGGCATAAGAAGGATCATAAGATTGACATGACAGAATATGGTGTG
AATAACATGCCTCTGCTGCCCTCACCACCACTTCCACCAGTTCTCCCACATAACTCTGTT
GATGAGGCCATGGTGAAGCCATCTGTGCCTGCTGGAATGGCTATTAGGAGTCATCCTCTC
AAAAGTTTGAGCTCTCAAATTTCTGTAAGCTATTTTTCCGTTGGATTGCTTCAACAGTAT
ACAAATAGCTTTTCTCAAGGAAATCTTATTGGAGAAGGCACACTTGGAAGCGTTTATAGA
GCTGAGCTTCCTGATGGAAAGCTATTGGCAGTCAAGAAATTACAGCCTGCTGTTTCCAGG
CAGCTGAGTGATGATGGATTTCTTAATCTAGTGTCAAGCATCTCTAAACTTCAACATGTC
AACGTTGTGAAGCTTGTGGGCTACTGTGCTGAGTATGGACAACGGCTGCTTGTGCATGAA
TATTGCAGAAATGGGACACTTAATGATGCACTGCACTTGGAGGATGAGATCCACAGCAAA
CTTTCTTGGAGTGCACGCATCCGGATAGCGTTGGGAGCTGCAAGAGCCCTGGAGTAA