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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0426g00040.t01
CDS Infomation

cds chromosome:12X:Un:28706457:28707387:-1 gene:VIT_00s0426g00040 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:F6HRI7]
Sequence

ATGTTTGAAACAAAGCTTTTGTTCCTGCAGTGCCACAATGGACACACACTCTGTTCAAGC
TGTAAAGCAAGGGTACTCAACAAATGTCCCACTTGTAGGCAACAGGTCGGTGATATAAGG
TGTCTAGCTCTGGAGAAGATGGCCAAATCACTTGAACTGCATTGCAAGAATGAGGAGTTT
GGATGCTTTGAGATCATCCCTTACCACACCAAGCTCATGCATGAAGACTCGTGTAACTTC
CGGCCATACAGCTGCCCATGGTATGGATGTCTGTGCTCTACTGTTGGGGATATTCCACTC
CTTGTTTCTCACCTAACAGATTATCACAAGGCAGTCATGCTCTATGGTTGCAAGTTCAAA
CTTGAATTTTTGATAGAAGGTCTCTATAAATACCAAAGCTACAAATGGGATGTAACTATC
ATCAATTGTTTTGACAAGCACTTCTTTCTCCATGCTAAAGCCTTCCTTATAGGGTCGACT
CCCGTTTACATGGCATTCCTTAGCTTGATAGGCAACCAAGCAGAGGCTGGCAACTACAGC
TACAACCTGGAGATAGGTGGAAATGGGCGGAAGCTTACTTTTGAGGGCATCCTACGAAGC
ATTAGAGAGAGTAAGAGGAGTAGCTTGGAAAGTGCGGACAACCTCATTGTGCTGGGAGAC
ATGGCGTTTTCCTTAGGAGGGGAGACGAGAATGCCCATGCTTTGGGTTACAGGTCGAATA
TGGTAA

Peptide Sequence

PEP ID

VIT_00s0426g00040.t01
PEP Infomation

pep chromosome:12X:Un:28706457:28707387:-1 gene:VIT_00s0426g00040 transcript:VIT_00s0426g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:F6HRI7]
Sequence

MFETKLLFLQCHNGHTLCSSCKARVLNKCPTCRQQVGDIRCLALEKMAKSLELHCKNEEF
GCFEIIPYHTKLMHEDSCNFRPYSCPWYGCLCSTVGDIPLLVSHLTDYHKAVMLYGCKFK
LEFLIEGLYKYQSYKWDVTIINCFDKHFFLHAKAFLIGSTPVYMAFLSLIGNQAEAGNYS
YNLEIGGNGRKLTFEGILRSIRESKRSSLESADNLIVLGDMAFSLGGETRMPMLWVTGRI
W

Transcript Sequence

Transcript ID

VIT_00s0426g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:28706457:28707387:-1 gene:VIT_00s0426g00040 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:F6HRI7]
Sequence

ATGTTTGAAACAAAGCTTTTGTTCCTGCAGTGCCACAATGGACACACACTCTGTTCAAGC
TGTAAAGCAAGGGTACTCAACAAATGTCCCACTTGTAGGCAACAGGTCGGTGATATAAGG
TGTCTAGCTCTGGAGAAGATGGCCAAATCACTTGAACTGCATTGCAAGAATGAGGAGTTT
GGATGCTTTGAGATCATCCCTTACCACACCAAGCTCATGCATGAAGACTCGTGTAACTTC
CGGCCATACAGCTGCCCATGGTATGGATGTCTGTGCTCTACTGTTGGGGATATTCCACTC
CTTGTTTCTCACCTAACAGATTATCACAAGGCAGTCATGCTCTATGGTTGCAAGTTCAAA
CTTGAATTTTTGATAGAAGGTCTCTATAAATACCAAAGCTACAAATGGGATGTAACTATC
ATCAATTGTTTTGACAAGCACTTCTTTCTCCATGCTAAAGCCTTCCTTATAGGGTCGACT
CCCGTTTACATGGCATTCCTTAGCTTGATAGGCAACCAAGCAGAGGCTGGCAACTACAGC
TACAACCTGGAGATAGGTGGAAATGGGCGGAAGCTTACTTTTGAGGGCATCCTACGAAGC
ATTAGAGAGAGTAAGAGGAGTAGCTTGGAAAGTGCGGACAACCTCATTGTGCTGGGAGAC
ATGGCGTTTTCCTTAGGAGGGGAGACGAGAATGCCCATGCTTTGGGTTACAGGTCGAATA
TGGTAA