Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0424g00020.t01
CDS Infomation

cds chromosome:12X:Un:28570195:28573067:1 gene:VIT_00s0424g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGGGGGCCGAGATGAGTGCATGACATCAAATCGTTGTGGCGACCAGGGTCCACTC
ATCCAGTTCCCTTTCCGTCTAAAAGACCGGCCACACCACTGTGGATATCCGGGATTTGAG
TTATCTTGCACTGAGAATAATCAGACCATGCTAGACCTGCCAGTTTCGGTAAAGATCTTG
GTGAAGAAAATAGCTTACAAATCCCGGGAAATCATTGTCCAGGACCCGGATAATTGCCTT
GCGAGACAGCTTCGAAACTTTAATTTAGCTGCCTCCCCCTTCTACTTCAAATTTGAACGG
GACTTCACCCTCTTCACTTGTTCCTCAGACAAAACAGAATCATATGGTTTTCAGTCCATC
CCTTGCCTTTCTATCCCTGGTAACCCAGTTTATGCTGTTCATTCCTCCAGATATGTCGAA
GATACGGATCTATCCTCTTGCCGCAGGCTTTACAACGCTTCAGCTCCTGAGGATTTTATG
TTCATTGAAAGTGCATTTTCTTTGAAGTGGTCGAAATCAATATGTGGAAGCTGCCCAGGA
GGAGGAAAAATATGCAGACTGAAGAAGAGTAATAGCACGGAACCAGAAACTGAATGTATT
AAAGTTAAAGGTGTATCGAAGAAAATAATTGTGACAGGTGCAATCTTTGGTTTTTTTCTT
CTCGTGTTAGTGATTGTTATGCTTTATCGTGTCTATAGCTCAGATAAAGTAGAAAGAGAG
AATAGAGTAAAGGTTAAAAAGTTTCTAGAAGACTATGAAGCTCTCAAGCCCTCAAGATAC
TCCTATGTTGATGTTAAAAGGATCACAAGTCAATTCAAAGATAAATTAGGCCAAGGAGGA
TATGGAACTGTGTACAAAGGAAAGCTTTCAGATGAAGTTTTTGTTGCAGTAAAAATCCTT
AACAATTCTCAAGGAAATGGGGAAGAGTTCATTAATGAAGTGGCAACAATGGGTACAATC
CACCATGTTAATATATTGTCAAGAACTATTCACTTAGTTGGAAGAAACTTCAAGAAATTG
CTATAG

Peptide Sequence

PEP ID

VIT_00s0424g00020.t01
PEP Infomation

pep chromosome:12X:Un:28570195:28573067:1 gene:VIT_00s0424g00020 transcript:VIT_00s0424g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRGGRDECMTSNRCGDQGPLIQFPFRLKDRPHHCGYPGFELSCTENNQTMLDLPVSVKIL
VKKIAYKSREIIVQDPDNCLARQLRNFNLAASPFYFKFERDFTLFTCSSDKTESYGFQSI
PCLSIPGNPVYAVHSSRYVEDTDLSSCRRLYNASAPEDFMFIESAFSLKWSKSICGSCPG
GGKICRLKKSNSTEPETECIKVKGVSKKIIVTGAIFGFFLLVLVIVMLYRVYSSDKVERE
NRVKVKKFLEDYEALKPSRYSYVDVKRITSQFKDKLGQGGYGTVYKGKLSDEVFVAVKIL
NNSQGNGEEFINEVATMGTIHHVNILSRTIHLVGRNFKKLL

Transcript Sequence

Transcript ID

VIT_00s0424g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:28570195:28573067:1 gene:VIT_00s0424g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCCTTTCCACTTTCTTTCCTATCCCAGAGACTTCTGTCCTTGGCAAAAGTCACAAATTC
CTTCCATAAAAATGGATCGATATCTCTGTTTGTTTTTGTTCTTGTTTCTGACCTTGTTTG
TGGAGATGAGAGGGGGCCGAGATGAGTGCATGACATCAAATCGTTGTGGCGACCAGGGTC
CACTCATCCAGTTCCCTTTCCGTCTAAAAGACCGGCCACACCACTGTGGATATCCGGGAT
TTGAGTTATCTTGCACTGAGAATAATCAGACCATGCTAGACCTGCCAGTTTCGGTAAAGA
TCTTGGTGAAGAAAATAGCTTACAAATCCCGGGAAATCATTGTCCAGGACCCGGATAATT
GCCTTGCGAGACAGCTTCGAAACTTTAATTTAGCTGCCTCCCCCTTCTACTTCAAATTTG
AACGGGACTTCACCCTCTTCACTTGTTCCTCAGACAAAACAGAATCATATGGTTTTCAGT
CCATCCCTTGCCTTTCTATCCCTGGTAACCCAGTTTATGCTGTTCATTCCTCCAGATATG
TCGAAGATACGGATCTATCCTCTTGCCGCAGGCTTTACAACGCTTCAGCTCCTGAGGATT
TTATGTTCATTGAAAGTGCATTTTCTTTGAAGTGGTCGAAATCAATATGTGGAAGCTGCC
CAGGAGGAGGAAAAATATGCAGACTGAAGAAGAGTAATAGCACGGAACCAGAAACTGAAT
GTATTAAAGTTAAAGGTGTATCGAAGAAAATAATTGTGACAGGTGCAATCTTTGGTTTTT
TTCTTCTCGTGTTAGTGATTGTTATGCTTTATCGTGTCTATAGCTCAGATAAAGTAGAAA
GAGAGAATAGAGTAAAGGTTAAAAAGTTTCTAGAAGACTATGAAGCTCTCAAGCCCTCAA
GATACTCCTATGTTGATGTTAAAAGGATCACAAGTCAATTCAAAGATAAATTAGGCCAAG
GAGGATATGGAACTGTGTACAAAGGAAAGCTTTCAGATGAAGTTTTTGTTGCAGTAAAAA
TCCTTAACAATTCTCAAGGAAATGGGGAAGAGTTCATTAATGAAGTGGCAACAATGGGTA
CAATCCACCATGTTAATATATTGTCAAGAACTATTCACTTAGTTGGAAGAAACTTCAAGA
AATTGCTATAGGTATAGCAAAAGGAATTGAGTATCTTCATCAAGGTTGTGATCAAAGAAT
CCTTCATTTTGATATCAAACCTCATAATATTTTACTTGACCACAACTTTAATCCAAAGAT
TTCTGACTTTGGTTTAGCCAAATTGTG