Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0421g00040.t01
CDS Infomation

cds chromosome:12X:Un:28535409:28537553:1 gene:VIT_00s0421g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATGGGATAATTCCAGAGAGTGTGGGCCAACTCTCAGCATTGGTTGCAGCGGATCTG
TCAGAGAATCCATGGGTTTGTGTTGTGACAGAGTCTCATTTCTCCAATCTCACAAGCTTA
ATTGAGTTGTCAATCAAGAAGTCATCTCCAAACATCACCTTGGTCTTCGATGTGAATTCT
AAATGGATTCCTCCTTTTAAACTCAGTTACCTGGAACTCCAAGCATGCCATCTAGGTCCC
AAATTTCCTGCATGGCTGAGAACCCAAAACCAGCTGAAGACAGTAGTGCTCAACAATGCT
AGGATTTCAGACTCCATACCTGATTGGTTTTGGAAGTTAGACTTGCAGCTCGAGCTACTG
GACTTTTCAAATAATCAACTGAGCGGGAAGGTCCCAAATTCATTGAAATTTACAGAAAAT
GCTGTTGTGGATTTGAGCTCCAACCGCTTTCACGGTCCTTTCCCACACTTTTCTTTTAAT
CTGAGTTCATTGTATTTGAGAGACAATTCATTTTCTGGACCAATACCCCGGGATTTTGGC
AAAACCATGCCCCGCTTGTCAAATTTTGTCGTCTCTTGGAACTCTCTAAATGGTACCATT
CCCTTGTCTATGGCTAAGATTACGGGTTTGACAAATCTGGTTATCTCAAATAATCAGTTT
TCTGGTGAAATTCCTTTGATTTGGAATGATAAACCAGATTTGTACGAAGTAGATATGGCA
AATAACAGCTTATCTGGTGAGATCCCCAGCTCAATGGGCACCCTGAATTCACTTATGTTC
TTGATACTGAGTGGCAACAAACTTTCAGGGGAAATTCCTTTTTCTCTGCAGAATTGCAAG
GACATGGATAGTTTTGACCTTGGCGACAATAGATTATCAGGAAACCTTCCATCATGGATA
GGAGAGATGCAATCGTTGTTGATTCTACGTCTGCGATCAAACTTCTTTGATGGAAACATT
CCCTCCCAAGTGTGCAGTCTTTCCCATCTTCATATATTGGACCTTGCACATAATTATCTG
TCAGGATCCGTTCCTTCTTGTTTGGGAAATTTGAGTGGCATGGCCACTGAAATCAGCGAT
TATAGATACGAGGGGCGATTGTCAGTTGTGGTGAAAGGAAGAGAACTCATATATCAGAGT
ACTCTGTATCTTGTGAATAGCATTGATCTTTCAGACAATAATTTATTGGGAAAGTTGCCT
GAAATAAGAAATCTTTCAAGACTTGGCACCTTGAACTTGTCCATAAACCATTTTACAGGA
AATATACCAGAGGACATTGGGGGCTTAAGTCAATTAGAAACTCTGGACCTCTCAAGAAAC
CAGCTCTCTGGCCCGATTCCACCAAGCATGACTTCTCTGACTTCCTTGAGTCACTTGAAC
CTATCTTACAACAGTCTATCTGGTAAAATTCCAACAAGCAACCAGTTCCAAACCTTCAAT
GACCCATCCATATACAGGAATAACCTTGCACTCTGCGGGGATCCTCTGCCACTGAAGTGC
CCAGGCGATGATAAAGCTACTACTGATTCTTCCAGGGCGGGTAATGAAGATCATGATGAT
GAGTTTGAAATGAGGTGGTTCTACGTCAGCATGGGGCCTGGATTTGTGGTGGGATTTTGG
GCAGTTTTTGGCCCTTTGATTATAAACAGGTCTTGGAGGCGAGCCTACTTCCGGTTCCTG
GATGAGATGAAAGATAGAGTGATGGTGGTTATCACAGTGAATGTTGCACGTCTGCAAAAG
AAATGCAAATGGGAAAGAAGACAACATGGAACTTGA

Peptide Sequence

PEP ID

VIT_00s0421g00040.t01
PEP Infomation

pep chromosome:12X:Un:28535409:28537553:1 gene:VIT_00s0421g00040 transcript:VIT_00s0421g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNGIIPESVGQLSALVAADLSENPWVCVVTESHFSNLTSLIELSIKKSSPNITLVFDVNS
KWIPPFKLSYLELQACHLGPKFPAWLRTQNQLKTVVLNNARISDSIPDWFWKLDLQLELL
DFSNNQLSGKVPNSLKFTENAVVDLSSNRFHGPFPHFSFNLSSLYLRDNSFSGPIPRDFG
KTMPRLSNFVVSWNSLNGTIPLSMAKITGLTNLVISNNQFSGEIPLIWNDKPDLYEVDMA
NNSLSGEIPSSMGTLNSLMFLILSGNKLSGEIPFSLQNCKDMDSFDLGDNRLSGNLPSWI
GEMQSLLILRLRSNFFDGNIPSQVCSLSHLHILDLAHNYLSGSVPSCLGNLSGMATEISD
YRYEGRLSVVVKGRELIYQSTLYLVNSIDLSDNNLLGKLPEIRNLSRLGTLNLSINHFTG
NIPEDIGGLSQLETLDLSRNQLSGPIPPSMTSLTSLSHLNLSYNSLSGKIPTSNQFQTFN
DPSIYRNNLALCGDPLPLKCPGDDKATTDSSRAGNEDHDDEFEMRWFYVSMGPGFVVGFW
AVFGPLIINRSWRRAYFRFLDEMKDRVMVVITVNVARLQKKCKWERRQHGT

Transcript Sequence

Transcript ID

VIT_00s0421g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:28535409:28537553:1 gene:VIT_00s0421g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTGCAAGAATTCTACATCTCTGAAAATCAAATGAATGGGATAATTCCAGAGAGTGTGGG
CCAACTCTCAGCATTGGTTGCAGCGGATCTGTCAGAGAATCCATGGGTTTGTGTTGTGAC
AGAGTCTCATTTCTCCAATCTCACAAGCTTAATTGAGTTGTCAATCAAGAAGTCATCTCC
AAACATCACCTTGGTCTTCGATGTGAATTCTAAATGGATTCCTCCTTTTAAACTCAGTTA
CCTGGAACTCCAAGCATGCCATCTAGGTCCCAAATTTCCTGCATGGCTGAGAACCCAAAA
CCAGCTGAAGACAGTAGTGCTCAACAATGCTAGGATTTCAGACTCCATACCTGATTGGTT
TTGGAAGTTAGACTTGCAGCTCGAGCTACTGGACTTTTCAAATAATCAACTGAGCGGGAA
GGTCCCAAATTCATTGAAATTTACAGAAAATGCTGTTGTGGATTTGAGCTCCAACCGCTT
TCACGGTCCTTTCCCACACTTTTCTTTTAATCTGAGTTCATTGTATTTGAGAGACAATTC
ATTTTCTGGACCAATACCCCGGGATTTTGGCAAAACCATGCCCCGCTTGTCAAATTTTGT
CGTCTCTTGGAACTCTCTAAATGGTACCATTCCCTTGTCTATGGCTAAGATTACGGGTTT
GACAAATCTGGTTATCTCAAATAATCAGTTTTCTGGTGAAATTCCTTTGATTTGGAATGA
TAAACCAGATTTGTACGAAGTAGATATGGCAAATAACAGCTTATCTGGTGAGATCCCCAG
CTCAATGGGCACCCTGAATTCACTTATGTTCTTGATACTGAGTGGCAACAAACTTTCAGG
GGAAATTCCTTTTTCTCTGCAGAATTGCAAGGACATGGATAGTTTTGACCTTGGCGACAA
TAGATTATCAGGAAACCTTCCATCATGGATAGGAGAGATGCAATCGTTGTTGATTCTACG
TCTGCGATCAAACTTCTTTGATGGAAACATTCCCTCCCAAGTGTGCAGTCTTTCCCATCT
TCATATATTGGACCTTGCACATAATTATCTGTCAGGATCCGTTCCTTCTTGTTTGGGAAA
TTTGAGTGGCATGGCCACTGAAATCAGCGATTATAGATACGAGGGGCGATTGTCAGTTGT
GGTGAAAGGAAGAGAACTCATATATCAGAGTACTCTGTATCTTGTGAATAGCATTGATCT
TTCAGACAATAATTTATTGGGAAAGTTGCCTGAAATAAGAAATCTTTCAAGACTTGGCAC
CTTGAACTTGTCCATAAACCATTTTACAGGAAATATACCAGAGGACATTGGGGGCTTAAG
TCAATTAGAAACTCTGGACCTCTCAAGAAACCAGCTCTCTGGCCCGATTCCACCAAGCAT
GACTTCTCTGACTTCCTTGAGTCACTTGAACCTATCTTACAACAGTCTATCTGGTAAAAT
TCCAACAAGCAACCAGTTCCAAACCTTCAATGACCCATCCATATACAGGAATAACCTTGC
ACTCTGCGGGGATCCTCTGCCACTGAAGTGCCCAGGCGATGATAAAGCTACTACTGATTC
TTCCAGGGCGGGTAATGAAGATCATGATGATGAGTTTGAAATGAGGTGGTTCTACGTCAG
CATGGGGCCTGGATTTGTGGTGGGATTTTGGGCAGTTTTTGGCCCTTTGATTATAAACAG
GTCTTGGAGGCGAGCCTACTTCCGGTTCCTGGATGAGATGAAAGATAGAGTGATGGTGGT
TATCACAGTGAATGTTGCACGTCTGCAAAAGAAATGCAAATGGGAAAGAAGACAACATGG
AACTTGAACAGGTGGTGAGCTACTAAATCTGATTTGTCGGACTGAAGTTTCACCTGTCAT
CTGTTGGGGGATTGTCAGTTTTTTTTTTTTTTTTCTAAGGTTTGAAATACGAGTTGTTAT
GTAAACTCTCTATTTATAGCACTGTTACTCTATTCTAAACTACCTCCAAGGTTTCTTGAA
GCCCTATAGATATAAAACATAACCCAAATAAAATCTATTAAGTTT