Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0420g00030.t01
CDS Infomation

cds chromosome:12X:Un:28492968:28495601:-1 gene:VIT_00s0420g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGCTTCACTGCTGGAGTTGAACCTCTAAACATCCCTCAAGTTTTCATCTGGAAT
GGAAGTCGGCCATATTGGCGTAGTGGTCCATGGGATGGTCAGATCTTGACGGGAGTAGAC
GTGAAATGGATTTATCTTGATGGGCTTAATATTGTTGATGATAAAGAAGGTACCGTTTAT
ATAACTTTTGCTTACCCGGATTCAGGTTTCTTCTATGCCTATGTCTTGACTCCTGAAGGA
ATACTAGTGGAAACATCCAGGGATAAAAGGAATGAGGATTGGAAAAGAGTATGGACGACC
AAGGAGAATGAGTGTGAAATTTATGGCAAGTGTGGGCCATTTGGACACTGCAACTCGAGG
GACTCACCAATTTGTAGCTGTTTGAAAGGGTATGAGCCAAAGCATACACAGGAATGGAAT
AGAGGGAATTGGACTGGTGGATGTGTGAGGAAGACGCCATTGCAATCTGAGAGAACCAAA
AATGGCAGTGAAGAGGCCAAAGTAGATGGGTTTCTCAAGTTAACAAACATGAAAGTGCCA
GACTTTGCAGAGCAGTCATATGCTCTTGAAGATGATTGCAGACAGCAATGCTTGAGGAAT
TGTTCCGCGTTGTGGTGGAGTGGAGATTTAATCGACATACAAAAACTGTCTAGCACAGGG
GCACATCTTTTCATCCGCGTTGCACATTCAGAAATAAAACAAGCAAAGAAGGGGAAAATT
GAAGAGATATTATCCTTCAACAGAGGAAAATTTTCTGATCTCAGTGTCCCTGGAGACGGT
GTGAATCAAGTCAAACTTGAAGAGCTGCCACTGATCGATTTTAATAAGCTTGCAACTGCA
ACAAACAATTTCCATGAGGCCAATAAGCTGGGGCAGGGTGGTTTTGGTCCTGTATACAGA
GGAAAATTGGCAGAAGGACAAGACATAGCAGTGAAAAGACTTTCAAGAGCATCTACACAA
GGGCTAGAAGAATTTATGAATGAGGTGGTGGTGATTTCTAAACTCCAACACAGGAATCTT
GTTAGACTAATTGGCTGCTGCATTGAAGGAGACGAGAAGATGTTGATCTACGAGTTCATG
CCGAATAAGAGCTTGGATGCTTCTCTCTTTGATCCTGTCAAGCGACAGTTTTTAGATTGG
AGGACACGGTTCAAGATTATTGAAGGAATTGGCCGAGGCCTTCTTTACCTTCACAGAGAT
TCTAGATTACGAATCATCCATAGAGACCTCAAGGCAGGTAATATTTTATTGGATGAAGAC
TTGAATCCTAAAATTTCAGATTTTGGTATGACCAGAATATTTGGAAGCGATCAAGATCAA
GCCAATACTAAAAGGGTTGTTGGAACATATGGCTATATGTCTCCCGAGTATGCAATGGAA
GGACGATTTTCAGAAAAATCAGATGTCTTCAGCTTTGGAGTACTTTTGTTAGAGATTGTG
AGTGGGAGAAAGAATAGTAGCTTTTACCATGAGGAGTATTTTACCATTTTGGGATATGCA
TGGAAACTGTGGAAGGAAGATAACATGAAAACATTAATAGATGGAAGTATATTAGAAGCA
TGCTTCCAAGAGGAGATATTGAGATGTATACATGTGGCACTGTTATGTGTGCAAGAATTG
GCTAAAGACAGGCCATCCATTTCAACTGTTGTGGGAATGATTTGTAGTGAAATCACACAT
CTTCCACCCCCAAAGCAACCTGCATTTACTGAGATACGGAGTAGCACAGATACAGAATCC
TCCGATAAAAAGTGTTCCCTAAACAAAGTCAGCATTACCATGATTGAGGGTCGCTAG

Peptide Sequence

PEP ID

VIT_00s0420g00030.t01
PEP Infomation

pep chromosome:12X:Un:28492968:28495601:-1 gene:VIT_00s0420g00030 transcript:VIT_00s0420g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSFTAGVEPLNIPQVFIWNGSRPYWRSGPWDGQILTGVDVKWIYLDGLNIVDDKEGTVY
ITFAYPDSGFFYAYVLTPEGILVETSRDKRNEDWKRVWTTKENECEIYGKCGPFGHCNSR
DSPICSCLKGYEPKHTQEWNRGNWTGGCVRKTPLQSERTKNGSEEAKVDGFLKLTNMKVP
DFAEQSYALEDDCRQQCLRNCSALWWSGDLIDIQKLSSTGAHLFIRVAHSEIKQAKKGKI
EEILSFNRGKFSDLSVPGDGVNQVKLEELPLIDFNKLATATNNFHEANKLGQGGFGPVYR
GKLAEGQDIAVKRLSRASTQGLEEFMNEVVVISKLQHRNLVRLIGCCIEGDEKMLIYEFM
PNKSLDASLFDPVKRQFLDWRTRFKIIEGIGRGLLYLHRDSRLRIIHRDLKAGNILLDED
LNPKISDFGMTRIFGSDQDQANTKRVVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIV
SGRKNSSFYHEEYFTILGYAWKLWKEDNMKTLIDGSILEACFQEEILRCIHVALLCVQEL
AKDRPSISTVVGMICSEITHLPPPKQPAFTEIRSSTDTESSDKKCSLNKVSITMIEGR

Transcript Sequence

Transcript ID

VIT_00s0420g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:28492968:28495601:-1 gene:VIT_00s0420g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGCTTCACTGCTGGAGTTGAACCTCTAAACATCCCTCAAGTTTTCATCTGGAAT
GGAAGTCGGCCATATTGGCGTAGTGGTCCATGGGATGGTCAGATCTTGACGGGAGTAGAC
GTGAAATGGATTTATCTTGATGGGCTTAATATTGTTGATGATAAAGAAGGTACCGTTTAT
ATAACTTTTGCTTACCCGGATTCAGGTTTCTTCTATGCCTATGTCTTGACTCCTGAAGGA
ATACTAGTGGAAACATCCAGGGATAAAAGGAATGAGGATTGGAAAAGAGTATGGACGACC
AAGGAGAATGAGTGTGAAATTTATGGCAAGTGTGGGCCATTTGGACACTGCAACTCGAGG
GACTCACCAATTTGTAGCTGTTTGAAAGGGTATGAGCCAAAGCATACACAGGAATGGAAT
AGAGGGAATTGGACTGGTGGATGTGTGAGGAAGACGCCATTGCAATCTGAGAGAACCAAA
AATGGCAGTGAAGAGGCCAAAGTAGATGGGTTTCTCAAGTTAACAAACATGAAAGTGCCA
GACTTTGCAGAGCAGTCATATGCTCTTGAAGATGATTGCAGACAGCAATGCTTGAGGAAT
TGTTCCGCGTTGTGGTGGAGTGGAGATTTAATCGACATACAAAAACTGTCTAGCACAGGG
GCACATCTTTTCATCCGCGTTGCACATTCAGAAATAAAACAAGCAAAGAAGGGGAAAATT
GAAGAGATATTATCCTTCAACAGAGGAAAATTTTCTGATCTCAGTGTCCCTGGAGACGGT
GTGAATCAAGTCAAACTTGAAGAGCTGCCACTGATCGATTTTAATAAGCTTGCAACTGCA
ACAAACAATTTCCATGAGGCCAATAAGCTGGGGCAGGGTGGTTTTGGTCCTGTATACAGA
GGAAAATTGGCAGAAGGACAAGACATAGCAGTGAAAAGACTTTCAAGAGCATCTACACAA
GGGCTAGAAGAATTTATGAATGAGGTGGTGGTGATTTCTAAACTCCAACACAGGAATCTT
GTTAGACTAATTGGCTGCTGCATTGAAGGAGACGAGAAGATGTTGATCTACGAGTTCATG
CCGAATAAGAGCTTGGATGCTTCTCTCTTTGATCCTGTCAAGCGACAGTTTTTAGATTGG
AGGACACGGTTCAAGATTATTGAAGGAATTGGCCGAGGCCTTCTTTACCTTCACAGAGAT
TCTAGATTACGAATCATCCATAGAGACCTCAAGGCAGGTAATATTTTATTGGATGAAGAC
TTGAATCCTAAAATTTCAGATTTTGGTATGACCAGAATATTTGGAAGCGATCAAGATCAA
GCCAATACTAAAAGGGTTGTTGGAACATATGGCTATATGTCTCCCGAGTATGCAATGGAA
GGACGATTTTCAGAAAAATCAGATGTCTTCAGCTTTGGAGTACTTTTGTTAGAGATTGTG
AGTGGGAGAAAGAATAGTAGCTTTTACCATGAGGAGTATTTTACCATTTTGGGATATGCA
TGGAAACTGTGGAAGGAAGATAACATGAAAACATTAATAGATGGAAGTATATTAGAAGCA
TGCTTCCAAGAGGAGATATTGAGATGTATACATGTGGCACTGTTATGTGTGCAAGAATTG
GCTAAAGACAGGCCATCCATTTCAACTGTTGTGGGAATGATTTGTAGTGAAATCACACAT
CTTCCACCCCCAAAGCAACCTGCATTTACTGAGATACGGAGTAGCACAGATACAGAATCC
TCCGATAAAAAGTGTTCCCTAAACAAAGTCAGCATTACCATGATTGAGGGTCGCTAG