Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_00s0413g00010.t01
CDS Infomation	cds chromosome:12X:Un:28165164:28167932:1 gene:VIT_00s0413g00010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase [Source:UniProtKB/TrEMBL;Acc:F6HD29]
Sequence	ATGTGGCTGATCATGAAGGTTTTCCTCTTACAAATTTTAGTGTTTCAACTTTTTGGTGGT GGCATCCATTGCCAAGCTTCAACCCGTCGGCATACTTTTGTGGTGAGGGAAGCTTCATAT ACAAGGCTTTGTAGCACCAAGAAAATGTTAACAGTAAATGGACAATTTCCGGGACCAACT ATATATGCTATGAAAGGAGAGACGATCATTGTCGACGTTTATAACAGGGGAAAAGAAAAT GTCACCATTCACTGGCATGGGGTGAACATGCCTAGATATCCATGGACAGATGGTCCCGAG TATATCACACAATGCCCAATTCAGCCTGGGTCAAAGTTTAGTCAGAAGATCATCCTTTCC TCTGAGGAAGGCACTTTATGGTGGCATGCTCACAGTGACTGGACCCGAGCCACCGTTCAT GGAGCTATAATCGTCTATCCTAAGAATGGAACCAAGTATCCTTTTCACAAACCTAATGCA GAAGTTCTCATCATATTAGGACAATGGTGGAAGATTGATGTGAATGCAATTCGAGATAAA GGGCTTGCAAACGGAGCTGATGCCAACGCCTCTGATTCTTTATTGATAAATGGACAACCC GGTGATCTACTTCCATGCTCAAAATCAAGCACATTCAAGCTAACAGTGGATCATGAAAAG ACCTATCTACTTCGCATAATCAATGCTGCCTTGCATGAGCCTCTCTTCTTCTCCATTGCC AAGCATAAAATGACAGTGGTTGGAACAGATGGTAGCTACACGAAACCATTGACACAAGAT TATATCACAATATTTCCTGGCCAAACCTTCGATGTCTTACTAGAAGCTAACCAACGCCCG GATCACTATTACATGGCGGCTAAAACTTATTCCGATGCCCCGACAGGTCGTAATATTTTT GATAACACAACCACCACAGCTATTATACAGTACAGGGGATACTACACTCCATCTTCACCT CCCTTCTTGCCTCATTTACCTGCATTCAATGACACAATTGCATCGCTTCAAGTCATGGCC ACCCTCCGAAGCTTAGCAGATGTGGAACATCCTTGCAATGTCCCATTGAGCACGAGCACT AAACTGATTTACACTCTTTCTATAAACTCGTACCCATGCGTCAATGATTCATGTTCAGGG GCCAATGGGACGCGGTCTGCCGCAAGTATAAACAACATAAGCTTCCATACCCCTACAGTT GACATACTGGAAGCTTACTATTATAACATCAATGGTGTATATGGAGATAAATTTCCTAGC GTTCCACCAGTGGTGTTTGATTTTACAGCATATTATCTTCCATTACTCTATCAATTGCCG AGCGCCGGAACAGAAGTAAGGGTGCTTGAGTATAACTCCACAGTGGAGATTGTTTTGCAA GGGACAAACTTGGTTGCAGGGGTAACCCACCCCATGCATCTCCATGGACACAGTTTCTAT GTTGTTGGATGGGGATTTGGGAATTTCGATGAAAATAGGGATCCTTTGCACTACAATCTG GTGGATCCTCCCCATCAGAATACCATCTCTGTTCCTAAGAATGGTTGGGTTGCAATCAGA TTCGAGGCATCCAACCCTGGAGTGTGGTTCATGCACTGCCATGTAGAACGCCATCTGACT TGGGGCATGGAAACTGTGTTCATAGTGAAAAATGGTAAACACCCAGAAGCTCAAATGTTG CCTCCTCCATCCGACATGCCACCATGTTGA

Peptide Sequence

PEP ID	VIT_00s0413g00010.t01
PEP Infomation	pep chromosome:12X:Un:28165164:28167932:1 gene:VIT_00s0413g00010 transcript:VIT_00s0413g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase [Source:UniProtKB/TrEMBL;Acc:F6HD29]
Sequence	MWLIMKVFLLQILVFQLFGGGIHCQASTRRHTFVVREASYTRLCSTKKMLTVNGQFPGPT IYAMKGETIIVDVYNRGKENVTIHWHGVNMPRYPWTDGPEYITQCPIQPGSKFSQKIILS SEEGTLWWHAHSDWTRATVHGAIIVYPKNGTKYPFHKPNAEVLIILGQWWKIDVNAIRDK GLANGADANASDSLLINGQPGDLLPCSKSSTFKLTVDHEKTYLLRIINAALHEPLFFSIA KHKMTVVGTDGSYTKPLTQDYITIFPGQTFDVLLEANQRPDHYYMAAKTYSDAPTGRNIF DNTTTTAIIQYRGYYTPSSPPFLPHLPAFNDTIASLQVMATLRSLADVEHPCNVPLSTST KLIYTLSINSYPCVNDSCSGANGTRSAASINNISFHTPTVDILEAYYYNINGVYGDKFPS VPPVVFDFTAYYLPLLYQLPSAGTEVRVLEYNSTVEIVLQGTNLVAGVTHPMHLHGHSFY VVGWGFGNFDENRDPLHYNLVDPPHQNTISVPKNGWVAIRFEASNPGVWFMHCHVERHLT WGMETVFIVKNGKHPEAQMLPPPSDMPPC

Transcript Sequence

Transcript ID	VIT_00s0413g00010.t01
Transcript Infomation	cdna chromosome:12X:Un:28165164:28167932:1 gene:VIT_00s0413g00010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase [Source:UniProtKB/TrEMBL;Acc:F6HD29]
Sequence	AAAAGGAGTAAGAAAATTGAAGGAGTTCTGTTTAGGAAAAGAGAGGAGGCTTTTATTCCA AAGAAGATGTGGCTGATCATGAAGGTTTTCCTCTTACAAATTTTAGTGTTTCAACTTTTT GGTGGTGGCATCCATTGCCAAGCTTCAACCCGTCGGCATACTTTTGTGGTGAGGGAAGCT TCATATACAAGGCTTTGTAGCACCAAGAAAATGTTAACAGTAAATGGACAATTTCCGGGA CCAACTATATATGCTATGAAAGGAGAGACGATCATTGTCGACGTTTATAACAGGGGAAAA GAAAATGTCACCATTCACTGGCATGGGGTGAACATGCCTAGATATCCATGGACAGATGGT CCCGAGTATATCACACAATGCCCAATTCAGCCTGGGTCAAAGTTTAGTCAGAAGATCATC CTTTCCTCTGAGGAAGGCACTTTATGGTGGCATGCTCACAGTGACTGGACCCGAGCCACC GTTCATGGAGCTATAATCGTCTATCCTAAGAATGGAACCAAGTATCCTTTTCACAAACCT AATGCAGAAGTTCTCATCATATTAGGACAATGGTGGAAGATTGATGTGAATGCAATTCGA GATAAAGGGCTTGCAAACGGAGCTGATGCCAACGCCTCTGATTCTTTATTGATAAATGGA CAACCCGGTGATCTACTTCCATGCTCAAAATCAAGCACATTCAAGCTAACAGTGGATCAT GAAAAGACCTATCTACTTCGCATAATCAATGCTGCCTTGCATGAGCCTCTCTTCTTCTCC ATTGCCAAGCATAAAATGACAGTGGTTGGAACAGATGGTAGCTACACGAAACCATTGACA CAAGATTATATCACAATATTTCCTGGCCAAACCTTCGATGTCTTACTAGAAGCTAACCAA CGCCCGGATCACTATTACATGGCGGCTAAAACTTATTCCGATGCCCCGACAGGTCGTAAT ATTTTTGATAACACAACCACCACAGCTATTATACAGTACAGGGGATACTACACTCCATCT TCACCTCCCTTCTTGCCTCATTTACCTGCATTCAATGACACAATTGCATCGCTTCAAGTC ATGGCCACCCTCCGAAGCTTAGCAGATGTGGAACATCCTTGCAATGTCCCATTGAGCACG AGCACTAAACTGATTTACACTCTTTCTATAAACTCGTACCCATGCGTCAATGATTCATGT TCAGGGGCCAATGGGACGCGGTCTGCCGCAAGTATAAACAACATAAGCTTCCATACCCCT ACAGTTGACATACTGGAAGCTTACTATTATAACATCAATGGTGTATATGGAGATAAATTT CCTAGCGTTCCACCAGTGGTGTTTGATTTTACAGCATATTATCTTCCATTACTCTATCAA TTGCCGAGCGCCGGAACAGAAGTAAGGGTGCTTGAGTATAACTCCACAGTGGAGATTGTT TTGCAAGGGACAAACTTGGTTGCAGGGGTAACCCACCCCATGCATCTCCATGGACACAGT TTCTATGTTGTTGGATGGGGATTTGGGAATTTCGATGAAAATAGGGATCCTTTGCACTAC AATCTGGTGGATCCTCCCCATCAGAATACCATCTCTGTTCCTAAGAATGGTTGGGTTGCA ATCAGATTCGAGGCATCCAACCCTGGAGTGTGGTTCATGCACTGCCATGTAGAACGCCAT CTGACTTGGGGCATGGAAACTGTGTTCATAGTGAAAAATGGTAAACACCCAGAAGCTCAA ATGTTGCCTCCTCCATCCGACATGCCACCATGTTGAA