Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0409g00010.t01
CDS Infomation

cds chromosome:12X:Un:27927753:27931006:1 gene:VIT_00s0409g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGATTAGTGCAAGTATCTTCTTCAGAAGGAAAAGACCAAAAGCAACAACCGTCAAC
GGGAAACTCTCATCCCGTGATATTCAAAAAGCAGCCCACTTGGTGGTCAACTGTAGAGCC
TGGTGGTCAATCCTTGAGGTCATGTATCTTCTTCCTCTCTCCTTCCTTTTTCCTTCAAAA
AGCCTTACAGAGAGCCAAGCTGAGAAACGAATGGAGTCTCCAAGATTACTTTTCTTCCTT
TATCCCATTCTCATACTTCACCTTCTTGCTGTCACCAATGCTCAGCCAAAGTTTCTCTAC
TACCGGTGTTCAAACGGTGTTGGTAATTATACCAATAACAGCACCTACAAGGCAAACCTC
AACACTCTCCTCACCTCCCTCTCTTCAAACAACGAAATAGATTATGGCTTTTACAATTTC
TCCGCAGGCCAAAACTCGGACAAAGTCAATGCAATCGCGCTTTGCAGAGGAGACGTAATG
CCAACCGCATGCCGGAGTTGTATCAATGACTCTAGGATTCAACTCACTCGGCTCTGTCCC
AACCAGAAGGAGGCAATAGGATGGTACGATGGTTGTATGCTGCGATACTCCAATGACTCC
ATATTTGGAAAAGCCCAAACTTCGCCCTCCTTTACAATGTGGAACCTTCAAAACGTCTCC
AATGTGGAAGATTTCAATCAGGTTCTGGGAAACCTGATGGCCAGCCTCCGAAGCAAAGCT
GCGTCTGGTGATTGGCGTCGCAAGTTCGCAACTGAAGAAGCAAATGTTACGAGTTTCCAA
AGCATATATGGGCTTATGCAGTGCACTCCTGATTTGTCCGAGTTGTCTTGCAGTAATTGC
TTAGAGGGCGCTATCAATGAAATTCCAACATGTTGTAATAGGCGCAAAGCAGGGAGAGTT
GTTAAACCCAGCTGTAATTTGAGATACGGAACATACCGTTTCTATTATTTTACAGCAGCT
AACGCGCCGCCACCAACAGCAACACCCCAACCTTCTCCTCCCTCAGCTGATCTCTCTCCA
CAGCCCTTAGCTAATACCACCTCTACACAAGCTAATGATGAGGATGACATTATAAATGTT
GAATCCTTGCACTTCGACTTTGACACAATTAGAGTTGCTACAAATAACTTCTCCGATTCT
AATAAGCTAGGACAAGGTGGATTTGGCCCTGTTTATAAGGGTAAGCTTTCTAATGGACAA
GATATTGCTGTGAAGAGATTGTCTAGTGGTTCAGGACAAGGAGAATTGGAATTCAAGAAC
GAGGTGGTATTAGTAGCCAAGCTTCAGCACAGGAATTTGGTTAGGCTCCTAGGTTTTTGT
TTGGATGGAGCCGAAAGACTTCTTATCTATGAGTTTGTGCCTAATACAAGTCTCGATCAC
TTCATCTTCGATCCAATTAGACGTGCACAATTGGATTGGGAAAGGCGTTACAAAATCATA
GGAGGCATTGCTCGAGGGCTTCTATACCTTCATGAAGATTCTCGACTTCGCATTATTCAT
CGTGATCTTAAAGCTAGCAACATTCTCTTAGATGCAGAAATGAACCCTAAAATTTCTGAT
TTTGGTATGGCAAGGTTATTCTTAGTAGATCAAACTCAAGGCAACACTAGTAGAATTGTG
GGAACCTATGGATATATGGCTCCTGAATATGCCATGCATGGACACTTCTCTGTTAAGACA
GATGTTTATAGCTTTGGCGTGTTAGTTTTGGAACTTGTGAGTGGTCAAAGGAATAACTGT
TTTCGTGTCAGTGAAAACATTGAGCATCTCCTAAGCTATGCCTGGAAAAATTGGAGGGAA
GGGACAGCCACCAACTTGATAGATCCGACAATGAGGATCAGTTCAATAAGTGAAATAATG
AGATGCATCCACATTGGGCTCTTGTGCGTTCAAGAAAACGAAGCTGACAGACCGACCATG
GCTTCTATTGCTCTCATGCTTAACAGTTACTCTCTAAGTCTCCCATTACCTTCACACCCT
GCATTTTTTATGAATACTAGCATGAATCGGGACATGTCTTTAGAATTGGAGGATAATTCA
AGGGTGGCCCAGTCGAATTATTTGCCGAGTAGATCATCCCATTTTTCAGTGAATGAGGCT
TCAATCACTGATCCATATCCTCGATAA

Peptide Sequence

PEP ID

VIT_00s0409g00010.t01
PEP Infomation

pep chromosome:12X:Un:27927753:27931006:1 gene:VIT_00s0409g00010 transcript:VIT_00s0409g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMISASIFFRRKRPKATTVNGKLSSRDIQKAAHLVVNCRAWWSILEVMYLLPLSFLFPSK
SLTESQAEKRMESPRLLFFLYPILILHLLAVTNAQPKFLYYRCSNGVGNYTNNSTYKANL
NTLLTSLSSNNEIDYGFYNFSAGQNSDKVNAIALCRGDVMPTACRSCINDSRIQLTRLCP
NQKEAIGWYDGCMLRYSNDSIFGKAQTSPSFTMWNLQNVSNVEDFNQVLGNLMASLRSKA
ASGDWRRKFATEEANVTSFQSIYGLMQCTPDLSELSCSNCLEGAINEIPTCCNRRKAGRV
VKPSCNLRYGTYRFYYFTAANAPPPTATPQPSPPSADLSPQPLANTTSTQANDEDDIINV
ESLHFDFDTIRVATNNFSDSNKLGQGGFGPVYKGKLSNGQDIAVKRLSSGSGQGELEFKN
EVVLVAKLQHRNLVRLLGFCLDGAERLLIYEFVPNTSLDHFIFDPIRRAQLDWERRYKII
GGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMARLFLVDQTQGNTSRIV
GTYGYMAPEYAMHGHFSVKTDVYSFGVLVLELVSGQRNNCFRVSENIEHLLSYAWKNWRE
GTATNLIDPTMRISSISEIMRCIHIGLLCVQENEADRPTMASIALMLNSYSLSLPLPSHP
AFFMNTSMNRDMSLELEDNSRVAQSNYLPSRSSHFSVNEASITDPYPR

Transcript Sequence

Transcript ID

VIT_00s0409g00010.t01
Transcript Infomation

cdna chromosome:12X:Un:27927753:27931006:1 gene:VIT_00s0409g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGATTAGTGCAAGTATCTTCTTCAGAAGGAAAAGACCAAAAGCAACAACCGTCAAC
GGGAAACTCTCATCCCGTGATATTCAAAAAGCAGCCCACTTGGTGGTCAACTGTAGAGCC
TGGTGGTCAATCCTTGAGGTCATGTATCTTCTTCCTCTCTCCTTCCTTTTTCCTTCAAAA
AGCCTTACAGAGAGCCAAGCTGAGAAACGAATGGAGTCTCCAAGATTACTTTTCTTCCTT
TATCCCATTCTCATACTTCACCTTCTTGCTGTCACCAATGCTCAGCCAAAGTTTCTCTAC
TACCGGTGTTCAAACGGTGTTGGTAATTATACCAATAACAGCACCTACAAGGCAAACCTC
AACACTCTCCTCACCTCCCTCTCTTCAAACAACGAAATAGATTATGGCTTTTACAATTTC
TCCGCAGGCCAAAACTCGGACAAAGTCAATGCAATCGCGCTTTGCAGAGGAGACGTAATG
CCAACCGCATGCCGGAGTTGTATCAATGACTCTAGGATTCAACTCACTCGGCTCTGTCCC
AACCAGAAGGAGGCAATAGGATGGTACGATGGTTGTATGCTGCGATACTCCAATGACTCC
ATATTTGGAAAAGCCCAAACTTCGCCCTCCTTTACAATGTGGAACCTTCAAAACGTCTCC
AATGTGGAAGATTTCAATCAGGTTCTGGGAAACCTGATGGCCAGCCTCCGAAGCAAAGCT
GCGTCTGGTGATTGGCGTCGCAAGTTCGCAACTGAAGAAGCAAATGTTACGAGTTTCCAA
AGCATATATGGGCTTATGCAGTGCACTCCTGATTTGTCCGAGTTGTCTTGCAGTAATTGC
TTAGAGGGCGCTATCAATGAAATTCCAACATGTTGTAATAGGCGCAAAGCAGGGAGAGTT
GTTAAACCCAGCTGTAATTTGAGATACGGAACATACCGTTTCTATTATTTTACAGCAGCT
AACGCGCCGCCACCAACAGCAACACCCCAACCTTCTCCTCCCTCAGCTGATCTCTCTCCA
CAGCCCTTAGCTAATACCACCTCTACACAAGCTAATGATGAGGATGACATTATAAATGTT
GAATCCTTGCACTTCGACTTTGACACAATTAGAGTTGCTACAAATAACTTCTCCGATTCT
AATAAGCTAGGACAAGGTGGATTTGGCCCTGTTTATAAGGGTAAGCTTTCTAATGGACAA
GATATTGCTGTGAAGAGATTGTCTAGTGGTTCAGGACAAGGAGAATTGGAATTCAAGAAC
GAGGTGGTATTAGTAGCCAAGCTTCAGCACAGGAATTTGGTTAGGCTCCTAGGTTTTTGT
TTGGATGGAGCCGAAAGACTTCTTATCTATGAGTTTGTGCCTAATACAAGTCTCGATCAC
TTCATCTTCGATCCAATTAGACGTGCACAATTGGATTGGGAAAGGCGTTACAAAATCATA
GGAGGCATTGCTCGAGGGCTTCTATACCTTCATGAAGATTCTCGACTTCGCATTATTCAT
CGTGATCTTAAAGCTAGCAACATTCTCTTAGATGCAGAAATGAACCCTAAAATTTCTGAT
TTTGGTATGGCAAGGTTATTCTTAGTAGATCAAACTCAAGGCAACACTAGTAGAATTGTG
GGAACCTATGGATATATGGCTCCTGAATATGCCATGCATGGACACTTCTCTGTTAAGACA
GATGTTTATAGCTTTGGCGTGTTAGTTTTGGAACTTGTGAGTGGTCAAAGGAATAACTGT
TTTCGTGTCAGTGAAAACATTGAGCATCTCCTAAGCTATGCCTGGAAAAATTGGAGGGAA
GGGACAGCCACCAACTTGATAGATCCGACAATGAGGATCAGTTCAATAAGTGAAATAATG
AGATGCATCCACATTGGGCTCTTGTGCGTTCAAGAAAACGAAGCTGACAGACCGACCATG
GCTTCTATTGCTCTCATGCTTAACAGTTACTCTCTAAGTCTCCCATTACCTTCACACCCT
GCATTTTTTATGAATACTAGCATGAATCGGGACATGTCTTTAGAATTGGAGGATAATTCA
AGGGTGGCCCAGTCGAATTATTTGCCGAGTAGATCATCCCATTTTTCAGTGAATGAGGCT
TCAATCACTGATCCATATCCTCGATAA