Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0407g00040.t01
CDS Infomation

cds chromosome:12X:Un:27827174:27829846:1 gene:VIT_00s0407g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCAGTGATAACGTCACTGCTACAACCCAATTGCTGCAATTCCAACAAGCTTCTTCAC
CATCGCCTAATCTGCTGGTGCAACAAGGCAATGTCAAGTTCCAGCAACAATCAACCTGGT
GCCTTCACCACCATCCGTGAGACGGTCACTTTTAAACAAGAGATCAAAAAGAGCAAATTC
ACTGCCATTGCCGGCCACATCCCCGACCAACAATACGCTAACTCCTTCCTTTCGCAGGTC
AAGGATCCCAAGGCTACCCACAATTGTTGGGCTTATAAGGTTGGAGACCAATACCGATCA
ACTGATGATGGTGAGCCATCGGGTACAGCAGGCAAGCCTATACAAGCTGCTATTGAGGCT
TCAGGATTAGATAGAGTTATGGTGGTTGTGATCAGGCATTTTGGAGGTATCGAATTAGGT
ACTGGAGGACTTGTCAGGGCTTATGGAAGAACTGCAGCAGAATGTTTGAAGAATGCCCCA
ACTTGCTTTGTGAAATCTAAGGTTCCAATGGCCGTGGAGGTTCCTTTTGAACTTCTGGGG
ATTCTATATCATCAGCTACAATCTTTTAAGGTTGAAGACATCAAGCAGGATTATGAAACT
GGTAAAGAGGGCACCACCATGGTTACTTTTAAGGTTGATTTTGACCAGGCCAAGAGTTTG
GAGGATGCAGTAAAAGACAATTGTAGCCGAGACTTAGTGTTTTATAAGAAGTGA

Peptide Sequence

PEP ID

VIT_00s0407g00040.t01
PEP Infomation

pep chromosome:12X:Un:27827174:27829846:1 gene:VIT_00s0407g00040 transcript:VIT_00s0407g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPVITSLLQPNCCNSNKLLHHRLICWCNKAMSSSSNNQPGAFTTIRETVTFKQEIKKSKF
TAIAGHIPDQQYANSFLSQVKDPKATHNCWAYKVGDQYRSTDDGEPSGTAGKPIQAAIEA
SGLDRVMVVVIRHFGGIELGTGGLVRAYGRTAAECLKNAPTCFVKSKVPMAVEVPFELLG
ILYHQLQSFKVEDIKQDYETGKEGTTMVTFKVDFDQAKSLEDAVKDNCSRDLVFYKK

Transcript Sequence

Transcript ID

VIT_00s0407g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:27827174:27829846:1 gene:VIT_00s0407g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTCAGACGGTGTGGATTCATATATATTTGCAGTGGAAGCTGTTGAAACACCCCAAACCCA
TGCCAGTGATAACGTCACTGCTACAACCCAATTGCTGCAATTCCAACAAGCTTCTTCACC
ATCGCCTAATCTGCTGGTGCAACAAGGCAATGTCAAGTTCCAGCAACAATCAACCTGGTG
CCTTCACCACCATCCGTGAGACGGTCACTTTTAAACAAGAGATCAAAAAGAGCAAATTCA
CTGCCATTGCCGGCCACATCCCCGACCAACAATACGCTAACTCCTTCCTTTCGCAGGTCA
AGGATCCCAAGGCTACCCACAATTGTTGGGCTTATAAGGTTGGAGACCAATACCGATCAA
CTGATGATGGTGAGCCATCGGGTACAGCAGGCAAGCCTATACAAGCTGCTATTGAGGCTT
CAGGATTAGATAGAGTTATGGTGGTTGTGATCAGGCATTTTGGAGGTATCGAATTAGGTA
CTGGAGGACTTGTCAGGGCTTATGGAAGAACTGCAGCAGAATGTTTGAAGAATGCCCCAA
CTTGCTTTGTGAAATCTAAGGTTCCAATGGCCGTGGAGGTTCCTTTTGAACTTCTGGGGA
TTCTATATCATCAGCTACAATCTTTTAAGGTTGAAGACATCAAGCAGGATTATGAAACTG
GTAAAGAGGGCACCACCATGGTTACTTTTAAGGTTGATTTTGACCAGGCCAAGAGTTTGG
AGGATGCAGTAAAAGACAATTGTAGCCGAGACTTAGTGTTTTATAAGAAGTGAAACAAGA
ATCCCACAACTATGTTTTTTTGGCTTCCTGTATAAATGAGAATACAGGGAGTGTCGAGAC
TTTTGAATCCATCATTCACCAAACAGGTACTGAACTTGTATATCTCAGTTTTGTATTGAT
TAACATCTTGTAGCTGCAAACTTTGTTGTGAGATTATTTGCACTTGGGTGTACAAGAAGA
TTGTTCTTGGCCTGATGTGATAAGTTGTACATACAATTCAGTCCAATAAAAAATGTACTG
CACTTATACCCCGTTGTT