Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0404g00040.t01
CDS Infomation

cds chromosome:12X:Un:27697387:27712321:1 gene:VIT_00s0404g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACGACAAGGCCAGTGTTTCCAAAGAGCTCAATGCCAGGCACAGAAAGATTTTGGAG
GGGCTTCTTAAATTACCAGAGAACAGGGAATGTGCTGACTGCAAAAGCAAAGCTCCGCGA
TGGGCTAGTGTGAATCTAGGAATTTTTATATGCATGCAATGTTCAGGGATCCACAGAAGT
CTTGGAGTACACATATCAAAGGTGAGATCTGCCACACTGGACACATGGCTTCCAGATCAG
GTTGCATTTATTCAGTCAATGGGAAATGAGAAATCAAATAGCTACTGGGAAGCAGAGCTG
CCTCCTAATTATGATAGAGTTGGAATTGAGAATTTTATTCGTGCAAAGTATGAAGAGAAA
AGATGGGTTCCTAGGGATGGAAAAGCAATATCACACTCAAGGGAGAGTCAACAGAAGGCT
TCTGCTTATAGACCTAGACCTGGGGGTAGTGGTGCACATAGATATACCAACAATGTTGAA
CATTCCTCTGACAAAAAAAATATTCATCCACCCAATACAAATAGCAGTATTCCTGCTTCA
AAAAGTAGAATTCCTGCAGCTTCTAAAGTGTCAAAGCAGACCACCCCTGATCCACAACCA
CAGGAGAATGTACAGAAATCAGAGTCATCAATTTCAAAAGCTGAACCTGTAAAGCAGGCT
GCTACTGCTACACCAATTGTGTCACCACCCAGAGTTGATTACGCCACTGATCTTTTCAGA
ATGCTCTCTGTGAAGGATTCTAGAGAAAATGATTCTGAGATATCTGCTGCTAATGGTGTG
TCAACAGGGTTTCAATCTGCTGAAGCTTCATCAACAGTGGAGAAAAGTACTCCATCAAAT
CCAGTTGAAAGCAATATTCAGTCTAAAACTGGAATTGAGGATCTCTTTAAAGATTTGACA
TTGGTCACACCACCCATTTTAGAGAAACCCCAGAAAGATATGAAAAATGACATTATGAAC
CTCTTTGAAAAGTCCAGCATGGTGTCTCCATTTTCTATCCATCAACAACAAGTTGCAATG
TTAGCCCAACAACAGTCCTTTCTCATGGCCGCTGCAGCAAGGTCTAATGGGTCCCACACT
TTTTCTGGCAGTATACATCAACCTGGAACCAATGGTGTTCACTTATCTACTCAGAACTGG
GGAAATATTGGTCATCAAAGGCCTGGAGTGTTGACACCAGTCACTGAGCCACAGAAACAT
ATGCAGATGGGAAACATCCGACCAACACATTGGTCGGGAACTAATGTTCCTTTACCAACA
CATTCGTTGGGAACTAATGGTCCTTTACCAGCACATTCGTCGGGAACTAATGTTCCTTTA
CCAGCACGTTCGTTGGGAACTAATGTTCCTTGTCCAACGTCGAGCATGTATAATATGAGC
CCAGCTCATCCTATCAACGGTGTTACAATGACAGGAGCTGGCAGGCTGCCTTCGGCATTG
CCAAATTCATCTGTCATTCTTCCTAAATCAGGAAATGATTACGATTTCTCATCGCTAACA
CAAGGGATGTTTACAAAACGGTGA

Peptide Sequence

PEP ID

VIT_00s0404g00040.t01
PEP Infomation

pep chromosome:12X:Un:27697387:27712321:1 gene:VIT_00s0404g00040 transcript:VIT_00s0404g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNDKASVSKELNARHRKILEGLLKLPENRECADCKSKAPRWASVNLGIFICMQCSGIHRS
LGVHISKVRSATLDTWLPDQVAFIQSMGNEKSNSYWEAELPPNYDRVGIENFIRAKYEEK
RWVPRDGKAISHSRESQQKASAYRPRPGGSGAHRYTNNVEHSSDKKNIHPPNTNSSIPAS
KSRIPAASKVSKQTTPDPQPQENVQKSESSISKAEPVKQAATATPIVSPPRVDYATDLFR
MLSVKDSRENDSEISAANGVSTGFQSAEASSTVEKSTPSNPVESNIQSKTGIEDLFKDLT
LVTPPILEKPQKDMKNDIMNLFEKSSMVSPFSIHQQQVAMLAQQQSFLMAAAARSNGSHT
FSGSIHQPGTNGVHLSTQNWGNIGHQRPGVLTPVTEPQKHMQMGNIRPTHWSGTNVPLPT
HSLGTNGPLPAHSSGTNVPLPARSLGTNVPCPTSSMYNMSPAHPINGVTMTGAGRLPSAL
PNSSVILPKSGNDYDFSSLTQGMFTKR

Transcript Sequence

Transcript ID

VIT_00s0404g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:27697387:27712321:1 gene:VIT_00s0404g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAATTTCAATCTTCCTTTTCCTTCTTCTTCCTTCTTCTTCCTTCCTTTATCGTTCCTCA
GATCATCGGAGGAGAGAGAGAGAGGCCGAGAAAGTGACGGCAGGCGCGAAAGTTGCGTCT
CTGATCTTTGAAATATCTCGATTAGGCGCCGACGACATGAACGACAAGGCCAGTGTTTCC
AAAGAGCTCAATGCCAGGCACAGAAAGATTTTGGAGGGGCTTCTTAAATTACCAGAGAAC
AGGGAATGTGCTGACTGCAAAAGCAAAGCTCCGCGATGGGCTAGTGTGAATCTAGGAATT
TTTATATGCATGCAATGTTCAGGGATCCACAGAAGTCTTGGAGTACACATATCAAAGGTG
AGATCTGCCACACTGGACACATGGCTTCCAGATCAGGTTGCATTTATTCAGTCAATGGGA
AATGAGAAATCAAATAGCTACTGGGAAGCAGAGCTGCCTCCTAATTATGATAGAGTTGGA
ATTGAGAATTTTATTCGTGCAAAGTATGAAGAGAAAAGATGGGTTCCTAGGGATGGAAAA
GCAATATCACACTCAAGGGAGAGTCAACAGAAGGCTTCTGCTTATAGACCTAGACCTGGG
GGTAGTGGTGCACATAGATATACCAACAATGTTGAACATTCCTCTGACAAAAAAAATATT
CATCCACCCAATACAAATAGCAGTATTCCTGCTTCAAAAAGTAGAATTCCTGCAGCTTCT
AAAGTGTCAAAGCAGACCACCCCTGATCCACAACCACAGGAGAATGTACAGAAATCAGAG
TCATCAATTTCAAAAGCTGAACCTGTAAAGCAGGCTGCTACTGCTACACCAATTGTGTCA
CCACCCAGAGTTGATTACGCCACTGATCTTTTCAGAATGCTCTCTGTGAAGGATTCTAGA
GAAAATGATTCTGAGATATCTGCTGCTAATGGTGTGTCAACAGGGTTTCAATCTGCTGAA
GCTTCATCAACAGTGGAGAAAAGTACTCCATCAAATCCAGTTGAAAGCAATATTCAGTCT
AAAACTGGAATTGAGGATCTCTTTAAAGATTTGACATTGGTCACACCACCCATTTTAGAG
AAACCCCAGAAAGATATGAAAAATGACATTATGAACCTCTTTGAAAAGTCCAGCATGGTG
TCTCCATTTTCTATCCATCAACAACAAGTTGCAATGTTAGCCCAACAACAGTCCTTTCTC
ATGGCCGCTGCAGCAAGGTCTAATGGGTCCCACACTTTTTCTGGCAGTATACATCAACCT
GGAACCAATGGTGTTCACTTATCTACTCAGAACTGGGGAAATATTGGTCATCAAAGGCCT
GGAGTGTTGACACCAGTCACTGAGCCACAGAAACATATGCAGATGGGAAACATCCGACCA
ACACATTGGTCGGGAACTAATGTTCCTTTACCAACACATTCGTTGGGAACTAATGGTCCT
TTACCAGCACATTCGTCGGGAACTAATGTTCCTTTACCAGCACGTTCGTTGGGAACTAAT
GTTCCTTGTCCAACGTCGAGCATGTATAATATGAGCCCAGCTCATCCTATCAACGGTGTT
ACAATGACAGGAGCTGGCAGGCTGCCTTCGGCATTGCCAAATTCATCTGTCATTCTTCCT
AAATCAGGAAATGATTACGATTTCTCATCGCTAACACAAGGGATGTTTACAAAACGGTGA
CCAATTCTCCAAGCTATGGGTGAAACAGATGTTGGCTTTGCTACATGTAGTGGAAAATAT
TAGAGTTACAGAAGATATAGCATTTGGTTGGGCTTGCTTTTTCAGTTTCATTGGGCCGGG
GCAGAATCTGCTCTTAATACATGGACAGTGGCTTCATTTGTATTACTAGGTGTCTAGCAG
TAATAAAATTCTTTAAAATTGCTTAATTGATTTTTTCTTTTCTTCTGGTATTCTTTTAAG
GGGATGGAAGTTGGCTATTTCCGTTGCTCCAATCCAAGGCTTGGCC