Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0396g00050.t01
CDS Infomation

cds chromosome:12X:Un:27348203:27350819:-1 gene:VIT_00s0396g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGCGAAAAAGACTGATTCAACCTGATCTACGACCAACCTTGCCTGCATTAAGATTT
AAAACTTGTCGTCTACTTCCAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGC
CGCATTCTCCGACGATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGA
GACAATCTTAACAGTTACATCCAATCACAAACTACACGAAAATTGCCCCTTTTTCATGGG
GATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAAATTCATATATCCTTTTTCCA
CTCAATCTAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTTGTGAAACTATT
CCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAATAGAATGGTAAGC
ATTACTCATTTGAAAGTGTCCCACGGTGATATAATATCTTTTCAAGAAAATGACGCGAGA
ATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATA
GGCAAATTCCTGGATCACCTGGTAAGAATGTGGAGAAAAACCAAAACAGAATGGTTCCAC
CTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTG
CGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCCGAAAAAGTA
TGCTTAGGCAGTTCCTTCGCGGAACACAACAGAATAAAGAGGAATTTGTATCATTTCAAA
TCCCTATTCTTATCGAAGAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGA
AGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCTGCATCCCCC
CATCAGTTTACTATGAAGAGAAGAATCAAAAGGATCGAACTACCTACTCATTATTCGGAG
GTGAATCATAGAACACCAAAAGTTGTGGTATCTTATGGACCTAACATAGGTCACATCCCT
CACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAA
AACATATAA

Peptide Sequence

PEP ID

VIT_00s0396g00050.t01
PEP Infomation

pep chromosome:12X:Un:27348203:27350819:-1 gene:VIT_00s0396g00050 transcript:VIT_00s0396g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWRKRLIQPDLRPTLPALRFKTCRLLPGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPR
DNLNSYIQSQTTRKLPLFHGDLPITEMHRGTERNSYILFPLNLETRSDVIPVRLHFCETI
PQARQPISHRRVCVNNRMVSITHLKVSHGDIISFQENDARIRGEEIRRSFYIEISVEKII
GKFLDHLVRMWRKTKTEWFHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKV
CLGSSFAEHNRIKRNLYHFKSLFLSKRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSASP
HQFTMKRRIKRIELPTHYSEVNHRTPKVVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQ
NI

Transcript Sequence

Transcript ID

VIT_00s0396g00050.t01
Transcript Infomation

cdna chromosome:12X:Un:27348203:27350819:-1 gene:VIT_00s0396g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGCGAAAAAGACTGATTCAACCTGATCTACGACCAACCTTGCCTGCATTAAGATTT
AAAACTTGTCGTCTACTTCCAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACGC
CGCATTCTCCGACGATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGA
GACAATCTTAACAGTTACATCCAATCACAAACTACACGAAAATTGCCCCTTTTTCATGGG
GATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAAATTCATATATCCTTTTTCCA
CTCAATCTAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTTGTGAAACTATT
CCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAATAGAATGGTAAGC
ATTACTCATTTGAAAGTGTCCCACGGTGATATAATATCTTTTCAAGAAAATGACGCGAGA
ATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATA
GGCAAATTCCTGGATCACCTGGTAAGAATGTGGAGAAAAACCAAAACAGAATGGTTCCAC
CTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTG
CGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCCGAAAAAGTA
TGCTTAGGCAGTTCCTTCGCGGAACACAACAGAATAAAGAGGAATTTGTATCATTTCAAA
TCCCTATTCTTATCGAAGAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGA
AGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCTGCATCCCCC
CATCAGTTTACTATGAAGAGAAGAATCAAAAGGATCGAACTACCTACTCATTATTCGGAG
GTGAATCATAGAACACCAAAAGTTGTGGTATCTTATGGACCTAACATAGGTCACATCCCT
CACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAA
AACATATAAAGATCGACGTAGTCGCTCATAGGGACATATCTATCCGGATAGAGGATAGTC
TAGATCGATTCATAGATAGATTTCTCTCCATATAGATAGGTATCTCCGTGAATAGAGATA
AAGATAGGGATCCATCTAGATCTTGATTCACTATTTCAATTTTTTTTTTCGATTGATTGC
CTTGACGACAAGTTTTAAATCTGCAAGGAAACATCGTTTTTCAATTAGGGTCGGAGCGTA
GACGAGCAAGCAGAGCCCAAGAAAGAGGGAAGCCCGTCATAGAGCAGTAGACTAGAAGTA
GAAGACTGCTGACCTGAGAGAAGGCGGTCTCTCTCGGGAAACATGGCCTAATTTCTCTTC
TTTTTTTTTTTCGGGTTTCTTTATTTTTTTCAGGAGCCCAGAACGATAAAAGGTGGGGGA
GAAGCAAGCCGAACCTCTGATCGACCTGGACACATAAAAAATTCTCGGCATCGAGAGAGA
TATTTTCTGCATTAAGTAACTCAGTGAGTGCTTTCTAAGAAGGGCTTGGCTTGGAAGAAG
AAAATGAAATCCGAACAACCGCGCTGGTCGTAATAGATCGACTTTCATGCGAGTTCTTGC
TCCAGCATTAAAGTTCCATTTCAGGGAAGGACGACGTACCATGATACTTTCTGTTTCGTC
GAGCCCTACTTTGGTCTCTGGTTTGATGGTTGCACGTGCTAAAAATCCGGTACATTCCGT
TTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGA
CTTCTCCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATT
CATTGTTATGATGTTCCATATTCAAATAGCGGAGACTCACGAAGAAGTATTGCGCTATTT
ACCAGTGAGTGGTATTATTGGACTGATCCTTTGGTGGGAAATGTTCTTCATTTTAGATAA
TGAAACCATTCCATTACTACCAACCCAAAGAAAGACGACCTCTCTGAGATATACGGTTTA
TGCCGAAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTA
CTATTCCGTCTGGTTTTTGGTTCCTAGTCCTATTTTATTAGTAGCCATGATTGGGGCTAT
AGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAGGATGTATTTCGACGAAATGC
TATTGATTCTAGGAGGACTATAATGAGGAGGATGACCGACCCACTCACGATCTACTAAAG
GGCAAGTAGCTTGATTGGTTCGAATCCAATTCGTGAGATAGCTCAAGTTATAGAGGCAAA
CGAGAAGATGAGAAAACGTCGTCTGCATCTTTTCGTCTGCTCGTCTGATCTTCTTCTCCT
ATAGGGGGGAGTGCCATGAAGCCCAATTGGAAAAGGGGAGCGGGTCTGAGGTAGTCAATG
GCCTTCATTCAAACTCATCGCTGCTGGATTAGTTCTCTCATATGGATCAGCCTAGGGAAC
GTAATCTCATAGCACATTCAAAAGCGAAGCTAGAGAC