Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0394g00040.t01
CDS Infomation

cds chromosome:12X:Un:27290503:27293435:1 gene:VIT_00s0394g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGACCATGACCGTGAAGATGTCTAGAGAAGAGCCGGCGGTGTCTTACGCTAGCAGA
TATTCATTGCCAGCTGAGCCTAAAGAGAACGACACAAAGTCCAATCTCTGCTCCGGTCCT
GTTATCCTTCTCTCACATGGAGATCCAACGGGGTTCAAGCCTTTCTGGCGAAGCGTGGGC
GACAAATGTAAGGTGACCATCGATAGCTGCGATTTTATGAGCTACCTGACCGATACTGGA
ACAGTGTGTTGGTTTCTGGAGAAGGAACTGGAGGAGGCAATCAGGCAATTACATCGTACG
GTTGGGAATGCAGTAACGGACGATCGGCATATCTTGGTGGGGACAGGTTCGACCCAGCTC
TATCACGCCGCGCTCTACGCTCTCACCTCTCCCGGGGGGCCTGAGCCCGTGAATGTGGTG
TCTGCGGTTCCATACTATTCGTCATACCCAGAAGAGACGAACTTCTTGTGTTCAGCTCTG
TACAAATGGGCTGGTGATGCATACACATTTGATAAGGAAGGACCTTACATAGAGCTGGTC
ACCATGCCCAACAATCCAGATGGTCAAGTTCGAGGCCCCACGGTGAACCGAAATGACGGC
AAGCTCATTCATGATCTTGCCTATTATTGGCCACAATATACACCTATTACTGCTCAGGCC
GACTATGATATCATGCTGTTTACATTTTCCAAAAGTATGGGACATGCAGGATCTCGAATT
GGGTGGGCTGTGGTGAAGGATAAGGACGTGGCTATAAAGATGACTAAATACATTGAGCTT
AACTCAATTGGTGTATCGAGAGAATCTCAGCATCGTGCTGCTAAAATTCTCGGCGCGGTA
TCTGATAGCAGCCAATGCATTGGGGCCAACTTCTTCGAATATGGCAAAAGCCTCATGGCT
GAAAGATGGACAAAAATCAGAGAGGTTATCAGTCGTAGCAGACTCTTCAGCCTGCCAAAG
TATATGGAAGAGTATTGTCAATTCAGCGGTGAAGACACTGAACCACATCCTGCCTTTGCA
TGGTTGAAGTGCAACAATGACATTGAGGACTTGGAGATTTTTCTCAGAAGATATAAGATT
ATGGGGAGAGGTGGGAGCCTATTTGGTTCTGATCCAAAGCATGTTAGAGTCAGTATGCTG
GGCGATGAAGAGACATTCAACCTCTTCTTAGAGAGGTTATCGTCTATTCAGGATACCATT
ACTAATAGTAATGGTAATGGAATTAAATTTGACGAATTGGAGAGGAAGCAGATAAGATGA

Peptide Sequence

PEP ID

VIT_00s0394g00040.t01
PEP Infomation

pep chromosome:12X:Un:27290503:27293435:1 gene:VIT_00s0394g00040 transcript:VIT_00s0394g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATMTVKMSREEPAVSYASRYSLPAEPKENDTKSNLCSGPVILLSHGDPTGFKPFWRSVG
DKCKVTIDSCDFMSYLTDTGTVCWFLEKELEEAIRQLHRTVGNAVTDDRHILVGTGSTQL
YHAALYALTSPGGPEPVNVVSAVPYYSSYPEETNFLCSALYKWAGDAYTFDKEGPYIELV
TMPNNPDGQVRGPTVNRNDGKLIHDLAYYWPQYTPITAQADYDIMLFTFSKSMGHAGSRI
GWAVVKDKDVAIKMTKYIELNSIGVSRESQHRAAKILGAVSDSSQCIGANFFEYGKSLMA
ERWTKIREVISRSRLFSLPKYMEEYCQFSGEDTEPHPAFAWLKCNNDIEDLEIFLRRYKI
MGRGGSLFGSDPKHVRVSMLGDEETFNLFLERLSSIQDTITNSNGNGIKFDELERKQIR

Transcript Sequence

Transcript ID

VIT_00s0394g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:27290503:27293435:1 gene:VIT_00s0394g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGAGGGAGAGAACTGATAAGAGCGTAGAAGACTTGTACACAGCCCACACTCACACCAA
ACTCAAAACAGAGAAACAGAGAAGATGGCGACCATGACCGTGAAGATGTCTAGAGAAGAG
CCGGCGGTGTCTTACGCTAGCAGATATTCATTGCCAGCTGAGCCTAAAGAGAACGACACA
AAGTCCAATCTCTGCTCCGGTCCTGTTATCCTTCTCTCACATGGAGATCCAACGGGGTTC
AAGCCTTTCTGGCGAAGCGTGGGCGACAAATGTAAGGTGACCATCGATAGCTGCGATTTT
ATGAGCTACCTGACCGATACTGGAACAGTGTGTTGGTTTCTGGAGAAGGAACTGGAGGAG
GCAATCAGGCAATTACATCGTACGGTTGGGAATGCAGTAACGGACGATCGGCATATCTTG
GTGGGGACAGGTTCGACCCAGCTCTATCACGCCGCGCTCTACGCTCTCACCTCTCCCGGG
GGGCCTGAGCCCGTGAATGTGGTGTCTGCGGTTCCATACTATTCGTCATACCCAGAAGAG
ACGAACTTCTTGTGTTCAGCTCTGTACAAATGGGCTGGTGATGCATACACATTTGATAAG
GAAGGACCTTACATAGAGCTGGTCACCATGCCCAACAATCCAGATGGTCAAGTTCGAGGC
CCCACGGTGAACCGAAATGACGGCAAGCTCATTCATGATCTTGCCTATTATTGGCCACAA
TATACACCTATTACTGCTCAGGCCGACTATGATATCATGCTGTTTACATTTTCCAAAAGT
ATGGGACATGCAGGATCTCGAATTGGGTGGGCTGTGGTGAAGGATAAGGACGTGGCTATA
AAGATGACTAAATACATTGAGCTTAACTCAATTGGTGTATCGAGAGAATCTCAGCATCGT
GCTGCTAAAATTCTCGGCGCGGTATCTGATAGCAGCCAATGCATTGGGGCCAACTTCTTC
GAATATGGCAAAAGCCTCATGGCTGAAAGATGGACAAAAATCAGAGAGGTTATCAGTCGT
AGCAGACTCTTCAGCCTGCCAAAGTATATGGAAGAGTATTGTCAATTCAGCGGTGAAGAC
ACTGAACCACATCCTGCCTTTGCATGGTTGAAGTGCAACAATGACATTGAGGACTTGGAG
ATTTTTCTCAGAAGATATAAGATTATGGGGAGAGGTGGGAGCCTATTTGGTTCTGATCCA
AAGCATGTTAGAGTCAGTATGCTGGGCGATGAAGAGACATTCAACCTCTTCTTAGAGAGG
TTATCGTCTATTCAGGATACCATTACTAATAGTAATGGTAATGGAATTAAATTTGACGAA
TTGGAGAGGAAGCAGATAAGATGAATGCACTATTTTATTTTGAAAGCTTTTGAAGCCAGA
GGTTAAATAAAATTGAGAGTAGCTGCAATATATTATCTAGATCCATCTAGTGGTTTGTAT
AATTGGTACGATGAACAGTTTTGTTTCCCTGATGTAAACCCATTTGGATCAGGCCTTACA
TCATCATAAGACTTCTTTTCCTTCTTC