Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0394g00020.t01
CDS Infomation

cds chromosome:12X:Un:27256725:27264573:-1 gene:VIT_00s0394g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGATGCCACAGTTGAGTCGTACCAAGAACATTGCGAAGCGCTCGAAGAAGTACTTG
GAAGAAGCCCTTTACGATAGACTGTTTAAAGATGGTAGCTCTGAAGTGAGCGTACGACAA
CAGTTGAATCATTTCCTCAAGAGCTCCAAGCGAGTCTTCAAATGGGAGGTCGGTGACACT
GTCAAGAAGCTTCGCGACCGCAAGCGCTTCTATCCTGCACTTAAGCTCTCAGAAACGATG
GCTAAAAGGGGCATGAACATGACAATCAGTGATCAAGCTATATATCTTGATTTGATTACC
AAAACTCGAGGAGTTGCTGCCGCAGAAAATTACTTCATTGATCTTCCTGAAACATCAAAG
AACCATCTTACTTATGGTGCTCTTCTCAATTGTTACTGCAAAGAATTATTGACTGAAAAA
GCAGAAGCTCTCATGGAAAGGATGAAGGAGCTGAAGTTGGGCCTAAGCTCTATGCCTTAT
AATAGCCTGATGACCCTCTACACAAAAATTGGCCAGCCTGAAAAGATTCCAACTATCATT
CAAGAATTGAAGAGTTTGGATATCATGCCAGATTCTTACACATACAATATTTGGATGAGG
GCCCTTGCTGCTGTTAATGATATTTCTGGTGTTGAGAGGGTAATTGAGGAGATGAAGAGG
GATGGTCGAGTGGCCAGTGATTGGACAACTTATAGCAACTTAGCTTCAATTTATGTTGAT
GCTGGTGTATTTGAAAAAGCGGAAAAGGCTCTTAAGGAGTTGGAGAAGAGAAATGCATGC
CGAGACCTTACTGCTTTCCAATTTCTAATCACATTGTATGGCAGAATTGGGAATCTGCTT
GAAGTTTATCGGGTATGGCGTTCTTTAAGGCTGGCTTTTCCTAAAACGGCAAATGTGAGC
TATCTTAATATGATTCAGGTCTTGGTTAATTTGAAAGATTTACCAGGTGCTGAGAAATGT
TTCCGGGAATGGGAATCTGGGTGTTCGATTTATGATATCAGGGTGGCAAATGCCCTAATA
GGAGCTTATGCTAAAGATGGTTTGCTAGAAAAAGCTGAAGAGCTCAAAGAGCATGCCCGC
AGGAGAGGGGCCAAGCCTAATGCTAAGACCTGGGAGATATTCCTTGCTTATCATTTGAAG
AACAGGGAAATGAAACAGGCTGTTGATTGTGTTGCTAATGCGATTTCAACTGGTAGAGGA
GATGGCCAAAAGTGGGTCCCATCACCTGAGATTATTGGAGTTTTTATGCAGCATTTTGAG
CAAGAAAAGGATGTTGATGGTGCAGAAGGTTTTCTTGAGATTCTGAAGAGCACTGTGGAG
GATCTAGGGGTTGAGGTGTTTGAATCATTGATCAGAATTTATGCTGCTGCTGGAAGGACA
AGTCCTGTGATGCGCCGGCGACTGAAGATGGAGAATGTGGAGGTTAGTGATTCCTGTAAG
AAGTTGCTTGAAGAGGTGTCTGTGGAGTAA

Peptide Sequence

PEP ID

VIT_00s0394g00020.t01
PEP Infomation

pep chromosome:12X:Un:27256725:27264573:-1 gene:VIT_00s0394g00020 transcript:VIT_00s0394g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAMPQLSRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDT
VKKLRDRKRFYPALKLSETMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSK
NHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTII
QELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVD
AGVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVS
YLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHAR
RRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFE
QEKDVDGAEGFLEILKSTVEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCK
KLLEEVSVE

Transcript Sequence

Transcript ID

VIT_00s0394g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:27256725:27264573:-1 gene:VIT_00s0394g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTGATTTTCGACACTGTGAACTCCACAGCAACAGCTCCGAAACAGAAACCCTAAACCT
AGCGGCTCAAAATGGCGATGCCACAGTTGAGTCGTACCAAGAACATTGCGAAGCGCTCGA
AGAAGTACTTGGAAGAAGCCCTTTACGATAGACTGTTTAAAGATGGTAGCTCTGAAGTGA
GCGTACGACAACAGTTGAATCATTTCCTCAAGAGCTCCAAGCGAGTCTTCAAATGGGAGG
TCGGTGACACTGTCAAGAAGCTTCGCGACCGCAAGCGCTTCTATCCTGCACTTAAGCTCT
CAGAAACGATGGCTAAAAGGGGCATGAACATGACAATCAGTGATCAAGCTATATATCTTG
ATTTGATTACCAAAACTCGAGGAGTTGCTGCCGCAGAAAATTACTTCATTGATCTTCCTG
AAACATCAAAGAACCATCTTACTTATGGTGCTCTTCTCAATTGTTACTGCAAAGAATTAT
TGACTGAAAAAGCAGAAGCTCTCATGGAAAGGATGAAGGAGCTGAAGTTGGGCCTAAGCT
CTATGCCTTATAATAGCCTGATGACCCTCTACACAAAAATTGGCCAGCCTGAAAAGATTC
CAACTATCATTCAAGAATTGAAGAGTTTGGATATCATGCCAGATTCTTACACATACAATA
TTTGGATGAGGGCCCTTGCTGCTGTTAATGATATTTCTGGTGTTGAGAGGGTAATTGAGG
AGATGAAGAGGGATGGTCGAGTGGCCAGTGATTGGACAACTTATAGCAACTTAGCTTCAA
TTTATGTTGATGCTGGTGTATTTGAAAAAGCGGAAAAGGCTCTTAAGGAGTTGGAGAAGA
GAAATGCATGCCGAGACCTTACTGCTTTCCAATTTCTAATCACATTGTATGGCAGAATTG
GGAATCTGCTTGAAGTTTATCGGGTATGGCGTTCTTTAAGGCTGGCTTTTCCTAAAACGG
CAAATGTGAGCTATCTTAATATGATTCAGGTCTTGGTTAATTTGAAAGATTTACCAGGTG
CTGAGAAATGTTTCCGGGAATGGGAATCTGGGTGTTCGATTTATGATATCAGGGTGGCAA
ATGCCCTAATAGGAGCTTATGCTAAAGATGGTTTGCTAGAAAAAGCTGAAGAGCTCAAAG
AGCATGCCCGCAGGAGAGGGGCCAAGCCTAATGCTAAGACCTGGGAGATATTCCTTGCTT
ATCATTTGAAGAACAGGGAAATGAAACAGGCTGTTGATTGTGTTGCTAATGCGATTTCAA
CTGGTAGAGGAGATGGCCAAAAGTGGGTCCCATCACCTGAGATTATTGGAGTTTTTATGC
AGCATTTTGAGCAAGAAAAGGATGTTGATGGTGCAGAAGGTTTTCTTGAGATTCTGAAGA
GCACTGTGGAGGATCTAGGGGTTGAGGTGTTTGAATCATTGATCAGAATTTATGCTGCTG
CTGGAAGGACAAGTCCTGTGATGCGCCGGCGACTGAAGATGGAGAATGTGGAGGTTAGTG
ATTCCTGTAAGAAGTTGCTTGAAGAGGTGTCTGTGGAGTAAGTTCTGTTTATCTGTTATT
TTATTCTCAGAATTTTGATCCTGCTGAGATAATTTTGAATGTTATTTTCTTGATATTCTA
TTTTGGT