Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0391g00020.t01
CDS Infomation

cds chromosome:12X:Un:27143542:27146950:-1 gene:VIT_00s0391g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGGCTGCTGTTGGATGGTGTCACAGCATCTTCTGCTCTCAACGCCTCCCAATCAC
GTGCCTCTGAATTTTTCTTCGGCCCTAATCTCTTCCACCCCGCTTTCCTTTTCTCTCGGA
AGCGGAAGTAGGAGCAGAGTCAGAGGCAGAGCTAGTGCCAGAGCCAGAGCCAGAGCCACT
CGTACCCCCAACGCACTGTCAGTCTCAGCTTCGTCGACTCTCCAAGCTCTCATCTTCGAC
TGCGATGGCGTCATTCTGGAGTCGGAAGACCTGCATCGCCGAGCCTACAACGATGCCTTC
TCTCACTTCAATGTGCGCTGCCCTTCTTCTCCCTCCCAGCACCCTCTCAACTGGGACAGT
CATTTCTATGACCAGCTCCAGAACCGGATTGGCGGTGGCAAGCCCAAGATGCGCTGGTAC
TTTAAGGAGTACGGCTGGCCTTCGTCCACCGTCTTTGACACCCCCCCGGAGGATGATGGC
GATAGAGCCAAGTTGATCGATATTCTTCAGGACTGGAAAACTGAAAGGTACAAAGAAATA
ATCAAATCTGGAACTGTGGAGCCTAGACCAGGTGTTTTGAGATTGATGGAGGAGACTAAG
GCCGCTGGAATAAAACTAGCTGTGTGCTCGGCAGCAACTAAAAGTTCAGTCATACTGTGT
CTTGAAAATCTTATAGGAATTGAGCGGTTTCAAGGTCTAGACTGTTTCCTTGCAGGTGAT
GATGTGAAGGAAAAAAAGCCGGATCCATCAATATATCAAACAGCTGTGAAGAGGCTAGGA
GTGTCGGAGAAAGATTGTTTGGTGGTGGAGGATAGTGTTATCGGGCTACAGGCAGCTACA
GGAGCTGGGATGTCATGTGTGATCACCTACACATCTTCAACAGCTGATCAGGATTTTAAA
GATGCAATAGCAATCTATCCTGACTTGAGTAATGTAAGGTTGAAAGACTTGGAGTTGTTG
CTTCAAAATGTTGTCCCTGCCAAGTAG

Peptide Sequence

PEP ID

VIT_00s0391g00020.t01
PEP Infomation

pep chromosome:12X:Un:27143542:27146950:-1 gene:VIT_00s0391g00020 transcript:VIT_00s0391g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGCCWMVSQHLLLSTPPNHVPLNFSSALISSTPLSFSLGSGSRSRVRGRASARARARAT
RTPNALSVSASSTLQALIFDCDGVILESEDLHRRAYNDAFSHFNVRCPSSPSQHPLNWDS
HFYDQLQNRIGGGKPKMRWYFKEYGWPSSTVFDTPPEDDGDRAKLIDILQDWKTERYKEI
IKSGTVEPRPGVLRLMEETKAAGIKLAVCSAATKSSVILCLENLIGIERFQGLDCFLAGD
DVKEKKPDPSIYQTAVKRLGVSEKDCLVVEDSVIGLQAATGAGMSCVITYTSSTADQDFK
DAIAIYPDLSNVRLKDLELLLQNVVPAK

Transcript Sequence

Transcript ID

VIT_00s0391g00020.t01
Transcript Infomation

cdna chromosome:12X:Un:27143542:27146950:-1 gene:VIT_00s0391g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAAGTGGATGAGTCGATCCGTTGGCGTGATCACCAATGGCGGGCTGCTGTTGGATGGTG
TCACAGCATCTTCTGCTCTCAACGCCTCCCAATCACGTGCCTCTGAATTTTTCTTCGGCC
CTAATCTCTTCCACCCCGCTTTCCTTTTCTCTCGGAAGCGGAAGTAGGAGCAGAGTCAGA
GGCAGAGCTAGTGCCAGAGCCAGAGCCAGAGCCACTCGTACCCCCAACGCACTGTCAGTC
TCAGCTTCGTCGACTCTCCAAGCTCTCATCTTCGACTGCGATGGCGTCATTCTGGAGTCG
GAAGACCTGCATCGCCGAGCCTACAACGATGCCTTCTCTCACTTCAATGTGCGCTGCCCT
TCTTCTCCCTCCCAGCACCCTCTCAACTGGGACAGTCATTTCTATGACCAGCTCCAGAAC
CGGATTGGCGGTGGCAAGCCCAAGATGCGCTGGTACTTTAAGGAGTACGGCTGGCCTTCG
TCCACCGTCTTTGACACCCCCCCGGAGGATGATGGCGATAGAGCCAAGTTGATCGATATT
CTTCAGGACTGGAAAACTGAAAGGTACAAAGAAATAATCAAATCTGGAACTGTGGAGCCT
AGACCAGGTGTTTTGAGATTGATGGAGGAGACTAAGGCCGCTGGAATAAAACTAGCTGTG
TGCTCGGCAGCAACTAAAAGTTCAGTCATACTGTGTCTTGAAAATCTTATAGGAATTGAG
CGGTTTCAAGGTCTAGACTGTTTCCTTGCAGGTGATGATGTGAAGGAAAAAAAGCCGGAT
CCATCAATATATCAAACAGCTGTGAAGAGGCTAGGAGTGTCGGAGAAAGATTGTTTGGTG
GTGGAGGATAGTGTTATCGGGCTACAGGCAGCTACAGGAGCTGGGATGTCATGTGTGATC
ACCTACACATCTTCAACAGCTGATCAGGATTTTAAAGATGCAATAGCAATCTATCCTGAC
TTGAGTAATGTAAGGTTGAAAGACTTGGAGTTGTTGCTTCAAAATGTTGTCCCTGCCAAG
TAGTGAACTCATCACATCCCTTGAAATTGGTTAGCTGTGTAAATTATATTGAAGTTTGGC
TGCTTGCCATTGTCAAAGATATCTTTCATCTATGTCTGTCTTTTTGTTAAGATGATCAAT
TTGATTTTTGCCAAATTGGTGAAAGAAAAGGGTCAATTTTTATGTTCCTATATTTTGTAT
TCACTTTACTCCTTGTAATGGAAGGAGAAATTTAAGCATCAAATGATTTGATTGTAAAAC
ATAATAAA