Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0388g00030.t01
CDS Infomation

cds chromosome:12X:Un:27003641:27007080:1 gene:VIT_00s0388g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAAGCAGAAACAGCAGGTGATCTCCCGTTTCTTCGCTCCCAAATCTAAAGCCCCT
TCATCATCTTCATCTTCAATACCATCATCACCATCTCCATCTCCATCTCCATCTTCGCTC
CCAAACCCACCAACCCCTCCACCGAAAATCTCCACCACTGTCACTTTCTCTCCTTCCAAA
CGCCTTCCTTCCTCCCACGTGTCCCCCTCCACCAAACCCCCCAAAGCCCCCAAAATCTCT
CACCCCATTGACCCCTCTCTCCACCAAAAGTTCGTACAGAAGCTTCTTCAGCCTTCTTCC
TCAACACCCACAAAGCTCCCACTTCCAACCACCAAGTACACTCCACTGGAGCAACAAGTC
GTGGACCTAAAGCAAAAATACCCAGATGTTCTATTGATGGTAGAAGTTGGGTATAGGTAT
AGATTCTTTGGTGAGGATGCTGAGATTGCAGCTAGGGTGTTGGGCATTTATGCTCATGTT
GATCACAATTTCTTGACTGCTAGCATACCAACTTTTCGATTAAATGTCCATGTGAGGAGG
CTTGTCAGTGCAGGGTTTAAGGTAGGTGTTGTTAAGCAGACCGAAACTGCAGCCATTAAG
GCGCATGGTTCGAATAAACTGGGACCCTTTTGCCGGGGTTTATCGGCATTGTACACGAAG
GCGACGTTGGAGGCAGCAGAGGACGTGGGAGGTGGGGAAGAGGAATGTGGGTCTTATAAT
AATTACTTGGTTTGTGTAGTTGAGAAAGGGATTAGTGTAGAAAATAGTAAAGATTGTGGT
GTTGGGGGTGGGTTTGATGTGAGAATTGGGATTGTTGCAGTTGAAGTATCAACGGGGGAT
GTTGTTCATGGGAAGTTCAATGATAATTTTATGAGGGCTGGGCTTGAGGCTGTGATTTTG
AGCATGTCTCCTGCTGAATTGCTTCTTGGATACCCGCTCTCTAAACAAACAGAGAAGTTG
CTATTAGCCTATGCTGGACCTGCATCAAATGTTCGTCTGGAGCGTACCTCAAGAGATTGC
TTCAGTGATGGTGGAGCACTTGCTGAAGTTATGTCTTTATATGAGAACTTAAGTGAAGAT
AGTAGAGTTGATCATCAAGTGGACAACACAGAAGTGATGGAACAGGAAAATCATTGCCTG
GCAATTGAGGTCTTAGTGTTTGTTGACTTTCTCGTGTCAGGAACGAAACAGTATGAATTG
CTGCTTCTTTGGACATATATTTTCATTTTAGCCACCAACCACCTCTTATGTGAAATTTGT
GAGTGCTCATTATGGTTCTGGTATAGCCTTGGTTTCATGAATTGCTTAATCATCGGGTGG
TCAATGTGGGGGCCTTCCCCGATAACAACTTTCTCTGGTCATTGTTGGTTTGTGATTTTT
GTGGACGATTGCAACCGCATGACACTTCTCTACCAAATGAAGACCAAAGCCGAAGTTTTC
ATGATTTTTCAAGCATTTCATGCCATGGTCTAG

Peptide Sequence

PEP ID

VIT_00s0388g00030.t01
PEP Infomation

pep chromosome:12X:Un:27003641:27007080:1 gene:VIT_00s0388g00030 transcript:VIT_00s0388g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKQKQQVISRFFAPKSKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK
RLPSSHVSPSTKPPKAPKISHPIDPSLHQKFVQKLLQPSSSTPTKLPLPTTKYTPLEQQV
VDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDHNFLTASIPTFRLNVHVRR
LVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAEDVGGGEEECGSYN
NYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGKFNDNFMRAGLEAVIL
SMSPAELLLGYPLSKQTEKLLLAYAGPASNVRLERTSRDCFSDGGALAEVMSLYENLSED
SRVDHQVDNTEVMEQENHCLAIEVLVFVDFLVSGTKQYELLLLWTYIFILATNHLLCEIC
ECSLWFWYSLGFMNCLIIGWSMWGPSPITTFSGHCWFVIFVDDCNRMTLLYQMKTKAEVF
MIFQAFHAMV

Transcript Sequence

Transcript ID

VIT_00s0388g00030.t01
Transcript Infomation

cdna chromosome:12X:Un:27003641:27007080:1 gene:VIT_00s0388g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAAGCAGAAACAGCAGGTGATCTCCCGTTTCTTCGCTCCCAAATCTAAAGCCCCT
TCATCATCTTCATCTTCAATACCATCATCACCATCTCCATCTCCATCTCCATCTTCGCTC
CCAAACCCACCAACCCCTCCACCGAAAATCTCCACCACTGTCACTTTCTCTCCTTCCAAA
CGCCTTCCTTCCTCCCACGTGTCCCCCTCCACCAAACCCCCCAAAGCCCCCAAAATCTCT
CACCCCATTGACCCCTCTCTCCACCAAAAGTTCGTACAGAAGCTTCTTCAGCCTTCTTCC
TCAACACCCACAAAGCTCCCACTTCCAACCACCAAGTACACTCCACTGGAGCAACAAGTC
GTGGACCTAAAGCAAAAATACCCAGATGTTCTATTGATGGTAGAAGTTGGGTATAGGTAT
AGATTCTTTGGTGAGGATGCTGAGATTGCAGCTAGGGTGTTGGGCATTTATGCTCATGTT
GATCACAATTTCTTGACTGCTAGCATACCAACTTTTCGATTAAATGTCCATGTGAGGAGG
CTTGTCAGTGCAGGGTTTAAGGTAGGTGTTGTTAAGCAGACCGAAACTGCAGCCATTAAG
GCGCATGGTTCGAATAAACTGGGACCCTTTTGCCGGGGTTTATCGGCATTGTACACGAAG
GCGACGTTGGAGGCAGCAGAGGACGTGGGAGGTGGGGAAGAGGAATGTGGGTCTTATAAT
AATTACTTGGTTTGTGTAGTTGAGAAAGGGATTAGTGTAGAAAATAGTAAAGATTGTGGT
GTTGGGGGTGGGTTTGATGTGAGAATTGGGATTGTTGCAGTTGAAGTATCAACGGGGGAT
GTTGTTCATGGGAAGTTCAATGATAATTTTATGAGGGCTGGGCTTGAGGCTGTGATTTTG
AGCATGTCTCCTGCTGAATTGCTTCTTGGATACCCGCTCTCTAAACAAACAGAGAAGTTG
CTATTAGCCTATGCTGGACCTGCATCAAATGTTCGTCTGGAGCGTACCTCAAGAGATTGC
TTCAGTGATGGTGGAGCACTTGCTGAAGTTATGTCTTTATATGAGAACTTAAGTGAAGAT
AGTAGAGTTGATCATCAAGTGGACAACACAGAAGTGATGGAACAGGAAAATCATTGCCTG
GCAATTGAGGTCTTAGTGTTTGTTGACTTTCTCGTGTCAGGAACGAAACAGTATGAATTG
CTGCTTCTTTGGACATATATTTTCATTTTAGCCACCAACCACCTCTTATGTGAAATTTGT
GAGTGCTCATTATGGTTCTGGTATAGCCTTGGTTTCATGAATTGCTTAATCATCGGGTGG
TCAATGTGGGGGCCTTCCCCGATAACAACTTTCTCTGGTCATTGTTGGTTTGTGATTTTT
GTGGACGATTGCAACCGCATGACACTTCTCTACCAAATGAAGACCAAAGCCGAAGTTTTC
ATGATTTTTCAAGCATTTCATGCCATGGTCTAG