Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0375g00040.t01
CDS Infomation

cds chromosome:12X:Un:26438134:26439605:1 gene:VIT_00s0375g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACAGCACCGATTCCTCCTCGGGCTCCCACCATCCGCAGCTGCCGCCGGGGTTTCGG
TTCCACCCCACTGATGAGGAGCTGGTAGTCCACTACCTGAAGAGGAAGGCGGCCTCCGTG
CCACTACCTGTGACCATCATAGCAGACGTGGATCTTTACAAGTTTGATCCATGGGAGCTA
CCAAGTAAGGCTACGTTTGGGGAGCAAGAGTGGTACTTCTTCAGTCCTAGGGACCGGAAA
TACCCCAACGGCGCACGGCCTAATCGGGCTGCGACTTCTGGGTATTGGAAGGCGACTGGA
ACCGATAAGCCTATACTGACATCAAATGGAAGTCAGAAGGTGGGAGTGAAGAAGGCATTA
GTCTTCTATGGTGGGAAACCCCCAAAAGGGATCAAAACCAATTGGATCATGCATGAGTAT
AGACTCATTGACAGCACTTCTTCTAATACAAAACCTCCTGGCGCGGACATGGGAAACAAG
AAAGGGTCTTTAAGGCTTGACGATTGGGTGCTGTGCCGGATTTACAAGAAGAACATCTCA
CAAAGGCCAATGGAGAGGGACAAGGAGGAGTCCATGGAGGCCCTGCTTGCATCCCTGCCA
GCTTCTTCCATGACCAGCCAGCAGAATACAAGGGCACAAACCCTGAGAAGTACAAATTTT
GGTGCAGTGCTGGAACATGAAGAGATCTCCTTTGAAGGTATGTTGACAGGACAAAGCATA
CAAGGGTTGCAAAGCAGCTCCATGTCTCAGTACTGGAATGGGGCGGGATCAATCGGACCA
TCATCATCGGGGAAACACTTACATACTGATCATACCAGTGGCACCAGTACTAGTGAAATG
GATGGAAACAGCTCATTCGTTTCCCTTCTCAACCAGCTTCCCCAAAGTGGTACATTCCAT
CAAAACACTCTTCTGGGGTCTCTAGCTGATGAAGAAAAGTTTAATTTAAGAAACATAAAT
CGAAAGAAATGTTTAAGAAGAAACAAAGTTGGTTGA

Peptide Sequence

PEP ID

VIT_00s0375g00040.t01
PEP Infomation

pep chromosome:12X:Un:26438134:26439605:1 gene:VIT_00s0375g00040 transcript:VIT_00s0375g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSTDSSSGSHHPQLPPGFRFHPTDEELVVHYLKRKAASVPLPVTIIADVDLYKFDPWEL
PSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSNGSQKVGVKKAL
VFYGGKPPKGIKTNWIMHEYRLIDSTSSNTKPPGADMGNKKGSLRLDDWVLCRIYKKNIS
QRPMERDKEESMEALLASLPASSMTSQQNTRAQTLRSTNFGAVLEHEEISFEGMLTGQSI
QGLQSSSMSQYWNGAGSIGPSSSGKHLHTDHTSGTSTSEMDGNSSFVSLLNQLPQSGTFH
QNTLLGSLADEEKFNLRNINRKKCLRRNKVG

Transcript Sequence

Transcript ID

VIT_00s0375g00040.t01
Transcript Infomation

cdna chromosome:12X:Un:26438134:26439605:1 gene:VIT_00s0375g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGATTCATGGACAGCACCGATTCCTCCTCGGGCTCCCACCATCCGCAGCTGCCGCCGGGG
TTTCGGTTCCACCCCACTGATGAGGAGCTGGTAGTCCACTACCTGAAGAGGAAGGCGGCC
TCCGTGCCACTACCTGTGACCATCATAGCAGACGTGGATCTTTACAAGTTTGATCCATGG
GAGCTACCAAGTAAGGCTACGTTTGGGGAGCAAGAGTGGTACTTCTTCAGTCCTAGGGAC
CGGAAATACCCCAACGGCGCACGGCCTAATCGGGCTGCGACTTCTGGGTATTGGAAGGCG
ACTGGAACCGATAAGCCTATACTGACATCAAATGGAAGTCAGAAGGTGGGAGTGAAGAAG
GCATTAGTCTTCTATGGTGGGAAACCCCCAAAAGGGATCAAAACCAATTGGATCATGCAT
GAGTATAGACTCATTGACAGCACTTCTTCTAATACAAAACCTCCTGGCGCGGACATGGGA
AACAAGAAAGGGTCTTTAAGGCTTGACGATTGGGTGCTGTGCCGGATTTACAAGAAGAAC
ATCTCACAAAGGCCAATGGAGAGGGACAAGGAGGAGTCCATGGAGGCCCTGCTTGCATCC
CTGCCAGCTTCTTCCATGACCAGCCAGCAGAATACAAGGGCACAAACCCTGAGAAGTACA
AATTTTGGTGCAGTGCTGGAACATGAAGAGATCTCCTTTGAAGGTATGTTGACAGGACAA
AGCATACAAGGGTTGCAAAGCAGCTCCATGTCTCAGTACTGGAATGGGGCGGGATCAATC
GGACCATCATCATCGGGGAAACACTTACATACTGATCATACCAGTGGCACCAGTACTAGT
GAAATGGATGGAAACAGCTCATTCGTTTCCCTTCTCAACCAGCTTCCCCAAAGTGGTACA
TTCCATCAAAACACTCTTCTGGGGTCTCTAGCTGATGAAGAAAAGTTTAATTTAAGAAAC
ATAAATCGAAAGAAATGTTTAAGAAGAAACAAAGTTGGTTGATGGATTGGATGGATATAT
GGATTTCTTATTTTATTTTTTGTGATTTTGATTG