Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0371g00050.t01
CDS Infomation

cds chromosome:12X:Un:26141107:26143435:-1 gene:VIT_00s0371g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAAATCTGCAGAGCAAGAGCACCCCACCAAGGCCTTTGGATGGGCAGCAACTGAC
ACATCTGGAGTCCTCTCTCCCTTCAAATTCTCCAGAAGGGAAACAGGAGAAAAAGACGTA
AGGTTCAAGGTGTTGTATTGTGGAATATGTCACTCCGATCTTCACATGGCCAAGAATGAC
TGGGGCACGTCCACCTACCCTATAGTTCCCGGACATGAGATTGTGGGCATAGTGACAGAG
GTGGGAAGCAAGGTCGGAAAGTTCAAAGTAGGAGACAGAGTTGGAGTGGGGTGCATGGTT
GGAGCTTGTCACTCTTGTGATAGCTGTGACAATGATCTCGAGAATTACTGCCCCAAAATG
GTATTCACCTACAGTGCCCCTTACCATGATGGAACCACCACATATGGAGGCTACTCAGAT
GTCATGGTTGCTGAGGAGCGCTATGTGGTTCGTATCCCAGACAACCTTCCTCTTGATGCT
GGTGCTCCTCTCCTATGTGCTGGGATCACAGTGTACAGCCCCTTGCAACATTTTGGACTC
ACCAAACCTGGAATGCACATCGGTGTGGTTGGCCTAGGTGGACTGGGACATGTAGCTGTA
AAGTTTGCCAAGGGTTTTGGGGTTAAGGTGACTGTGATCAGTACTTCCCCTAGCAAGAAG
AAGGAAGCCATAGAACACCTTGGTGCCGACTACTTTCTAGTCAGCCGCGAACCAGATCAG
ATGCAGGCTGCCATGGGCACAATGGATGGCATCATTGATACAGTCTCTGCTGTTCACCCT
CTTCTTCCATTGATCGGTTTGTTGAAATCTCAAGGGAAGCTCGTTATGGTTGGTGCACCA
AATAGGCCACTTGAGCTACCAGTCTTTCCTTTGATTATGGGGAGGAAGGTAGTAGCTGGA
AGCTGTATAGGAGGGATGAAGGAGACACAGGAAATGATTGATTTTGCGGGGAAACACAAC
ATAACTGCAGATGTTGAGGTTATTCCAATGGACTATGTGAACACTGCCATGGAGCGACTG
GAGAAAGCCGATGTTAGGTACCGCTTCGTAATTGACATTGGTAACACCTTGAAATCAGCC
TAA

Peptide Sequence

PEP ID

VIT_00s0371g00050.t01
PEP Infomation

pep chromosome:12X:Un:26141107:26143435:-1 gene:VIT_00s0371g00050 transcript:VIT_00s0371g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKSAEQEHPTKAFGWAATDTSGVLSPFKFSRRETGEKDVRFKVLYCGICHSDLHMAKND
WGTSTYPIVPGHEIVGIVTEVGSKVGKFKVGDRVGVGCMVGACHSCDSCDNDLENYCPKM
VFTYSAPYHDGTTTYGGYSDVMVAEERYVVRIPDNLPLDAGAPLLCAGITVYSPLQHFGL
TKPGMHIGVVGLGGLGHVAVKFAKGFGVKVTVISTSPSKKKEAIEHLGADYFLVSREPDQ
MQAAMGTMDGIIDTVSAVHPLLPLIGLLKSQGKLVMVGAPNRPLELPVFPLIMGRKVVAG
SCIGGMKETQEMIDFAGKHNITADVEVIPMDYVNTAMERLEKADVRYRFVIDIGNTLKSA

Transcript Sequence

Transcript ID

VIT_00s0371g00050.t01
Transcript Infomation

cdna chromosome:12X:Un:26141107:26143435:-1 gene:VIT_00s0371g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTATTCATCATCTTCGATCTGATCATCCAGGCAAGAAAGGCAAATGGCAAAATCTGCAGA
GCAAGAGCACCCCACCAAGGCCTTTGGATGGGCAGCAACTGACACATCTGGAGTCCTCTC
TCCCTTCAAATTCTCCAGAAGGGAAACAGGAGAAAAAGACGTAAGGTTCAAGGTGTTGTA
TTGTGGAATATGTCACTCCGATCTTCACATGGCCAAGAATGACTGGGGCACGTCCACCTA
CCCTATAGTTCCCGGACATGAGATTGTGGGCATAGTGACAGAGGTGGGAAGCAAGGTCGG
AAAGTTCAAAGTAGGAGACAGAGTTGGAGTGGGGTGCATGGTTGGAGCTTGTCACTCTTG
TGATAGCTGTGACAATGATCTCGAGAATTACTGCCCCAAAATGGTATTCACCTACAGTGC
CCCTTACCATGATGGAACCACCACATATGGAGGCTACTCAGATGTCATGGTTGCTGAGGA
GCGCTATGTGGTTCGTATCCCAGACAACCTTCCTCTTGATGCTGGTGCTCCTCTCCTATG
TGCTGGGATCACAGTGTACAGCCCCTTGCAACATTTTGGACTCACCAAACCTGGAATGCA
CATCGGTGTGGTTGGCCTAGGTGGACTGGGACATGTAGCTGTAAAGTTTGCCAAGGGTTT
TGGGGTTAAGGTGACTGTGATCAGTACTTCCCCTAGCAAGAAGAAGGAAGCCATAGAACA
CCTTGGTGCCGACTACTTTCTAGTCAGCCGCGAACCAGATCAGATGCAGGCTGCCATGGG
CACAATGGATGGCATCATTGATACAGTCTCTGCTGTTCACCCTCTTCTTCCATTGATCGG
TTTGTTGAAATCTCAAGGGAAGCTCGTTATGGTTGGTGCACCAAATAGGCCACTTGAGCT
ACCAGTCTTTCCTTTGATTATGGGGAGGAAGGTAGTAGCTGGAAGCTGTATAGGAGGGAT
GAAGGAGACACAGGAAATGATTGATTTTGCGGGGAAACACAACATAACTGCAGATGTTGA
GGTTATTCCAATGGACTATGTGAACACTGCCATGGAGCGACTGGAGAAAGCCGATGTTAG
GTACCGCTTCGTAATTGACATTGGTAACACCTTGAAATCAGCCTAAGATAAGATAAGCTA
GCTGGCACAATAATTGATTGTCCTCGAGCAATTGACTTGCGGCCAAATGAAGATTGAAAC
TGAGTGGTTTTAGTTCGTTTAATTCAACCATATATGTACTTTTCTGTATGGTGTTTGAAG
CATGGCTTCATATTGTACTCTATATAACCTTATCTTTAATAATATTA